RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W YJR008WP47085 338 aa2.21□□□□□ -2.06
CFT1YDR301W NST1P53935 1240 aa2.21□□□□□ -2.06
CFT1YDR301W PIB1Q06651 286 aa2.21□□□□□ -2.06
CFT1YDR301W INP54Q08227 384 aaKnown RBP2.21□□□□□ -2.06
CFT1YDR301W GLN1P32288 370 aaKnown RBP2.21□□□□□ -2.06
CFT1YDR301W XKS1P42826 600 aa2.21□□□□□ -2.06
CFT1YDR301W HEF3P53978 1044 aaKnown RBP2.21□□□□□ -2.06
CFT1YDR301W CDC45Q08032 650 aa2.21□□□□□ -2.06
CFT1YDR301W DPS1P04802 557 aaKnown RBP2.2□□□□□ -2.06
CFT1YDR301W PRD1P25375 712 aa2.2□□□□□ -2.06
CFT1YDR301W UGA3P26370 528 aa2.2□□□□□ -2.06
CFT1YDR301W PRS1P32895 427 aaKnown RBP2.2□□□□□ -2.06
CFT1YDR301W NTH2P35172 780 aa2.2□□□□□ -2.06
CFT1YDR301W YKR075CP36155 307 aa2.2□□□□□ -2.06
CFT1YDR301W RCR1P38212 213 aa2.2□□□□□ -2.06
CFT1YDR301W VPS27P40343 622 aaKnown RBP2.2□□□□□ -2.06
CFT1YDR301W RIM101P33400 625 aa2.2□□□□□ -2.06
CFT1YDR301W AKL1P38080 1108 aaKnown RBP2.2□□□□□ -2.06
CFT1YDR301W SSP1P38871 571 aa2.2□□□□□ -2.06
CFT1YDR301W HGH1P48362 394 aaKnown RBP2.2□□□□□ -2.06
CFT1YDR301W FOX2Q02207 900 aaKnown RBP2.2□□□□□ -2.06
CFT1YDR301W SSK22P25390 1331 aaPredicted RBP2.2□□□□□ -2.06
CFT1YDR301W MDG1P53885 366 aa2.2□□□□□ -2.06
CFT1YDR301W RPN1P38764 993 aaKnown RBP2.19□□□□□ -2.06
CFT1YDR301W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
CFT1YDR301W GRX1P25373 110 aaKnown RBP2.19□□□□□ -2.06
CFT1YDR301W KCC4P25389 1037 aa2.19□□□□□ -2.06
CFT1YDR301W DOT5P40553 215 aa2.19□□□□□ -2.06
CFT1YDR301W AOS1Q06624 347 aa2.19□□□□□ -2.06
CFT1YDR301W RAD4P14736 754 aa2.19□□□□□ -2.06
CFT1YDR301W APP1P53933 587 aa2.19□□□□□ -2.06
CFT1YDR301W THI22Q06490 572 aa2.19□□□□□ -2.06
CFT1YDR301W ADE16P54113 591 aaKnown RBP2.18□□□□□ -2.06
CFT1YDR301W BUD27P43573 796 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
CFT1YDR301W OSM1P21375 501 aaKnown RBP2.18□□□□□ -2.06
CFT1YDR301W SET1P38827 1080 aaKnown RBP2.18□□□□□ -2.06
CFT1YDR301W GAS4Q08271 471 aa2.18□□□□□ -2.06
CFT1YDR301W PHM7Q12252 991 aa2.18□□□□□ -2.06
CFT1YDR301W YKL133CP36066 463 aa2.17□□□□□ -2.06
CFT1YDR301W SAP155P43612 1002 aa2.17□□□□□ -2.06
CFT1YDR301W UTP22P53254 1237 aaPredicted RBP2.17□□□□□ -2.06
CFT1YDR301W ORC1P54784 914 aaPredicted RBP2.17□□□□□ -2.06
CFT1YDR301W YDR306CQ06640 478 aa2.17□□□□□ -2.06
CFT1YDR301W UBP1P25037 809 aa2.17□□□□□ -2.06
CFT1YDR301W CDC27P38042 758 aa2.17□□□□□ -2.06
CFT1YDR301W NPR2P39923 615 aa2.17□□□□□ -2.06
CFT1YDR301W RTR1P40084 226 aaPredicted RBP2.17□□□□□ -2.06
CFT1YDR301W NSE3Q05541 303 aa2.17□□□□□ -2.06
CFT1YDR301W SUI2P20459 304 aaKnown RBP2.17□□□□□ -2.06
CFT1YDR301W NSR1P27476 414 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
CFT1YDR301W BDF1P35817 686 aa2.17□□□□□ -2.06
CFT1YDR301W GYP7P48365 746 aa2.17□□□□□ -2.06
CFT1YDR301W BUD31P25337 157 aaPredicted RBP2.17□□□□□ -2.06
CFT1YDR301W YOL057WQ08225 711 aa2.17□□□□□ -2.06
CFT1YDR301W SAC3P46674 1301 aa2.16□□□□□ -2.06
CFT1YDR301W YDL144CQ07589 356 aa2.16□□□□□ -2.06
CFT1YDR301W FAS2P19097 1887 aaKnown RBP2.16□□□□□ -2.06
CFT1YDR301W COBP00163 385 aa2.16□□□□□ -2.06
CFT1YDR301W PRP40P33203 583 aaKnown RBP2.16□□□□□ -2.06
CFT1YDR301W YPP1P46951 817 aa2.16□□□□□ -2.06
CFT1YDR301W ZDS1P50111 915 aaKnown RBP2.16□□□□□ -2.06
CFT1YDR301W LAM6Q08001 693 aa2.16□□□□□ -2.06
CFT1YDR301W SSP2Q08646 371 aa2.16□□□□□ -2.06
CFT1YDR301W TOS1P38288 455 aa2.16□□□□□ -2.06
CFT1YDR301W YLR271WQ06152 274 aa2.16□□□□□ -2.06
CFT1YDR301W PMD1P32634 1753 aa2.15□□□□□ -2.06
CFT1YDR301W RPS9BP05755 195 aaKnown RBP2.15□□□□□ -2.06
CFT1YDR301W RPS19AP07280 144 aaKnown RBP2.15□□□□□ -2.06
CFT1YDR301W RPS19BP07281 144 aaPredicted RBP2.15□□□□□ -2.06
CFT1YDR301W HSP104P31539 908 aaKnown RBP2.15□□□□□ -2.06
CFT1YDR301W RMT2Q03305 412 aa2.15□□□□□ -2.06
CFT1YDR301W RTT109Q07794 436 aa2.15□□□□□ -2.06
CFT1YDR301W MSB4Q12317 492 aa2.15□□□□□ -2.06
CFT1YDR301W AIM44Q99299 758 aa2.15□□□□□ -2.06
CFT1YDR301W CTH1P47976 325 aa2.15□□□□□ -2.07
CFT1YDR301W DIB1Q06819 143 aaPredicted RBP2.15□□□□□ -2.07
CFT1YDR301W MAK21Q12176 1025 aaKnown RBP2.15□□□□□ -2.07
CFT1YDR301W RVB2Q12464 471 aaKnown RBP2.15□□□□□ -2.07
CFT1YDR301W COQ4O13525 335 aa2.15□□□□□ -2.07
CFT1YDR301W GCD7P32502 381 aaPredicted RBP2.15□□□□□ -2.07
CFT1YDR301W BUB1P41695 1021 aaKnown RBP RIP-Chip data2.15□□□□□ -2.07not detected
CFT1YDR301W MPP10P47083 593 aaKnown RBP2.15□□□□□ -2.07
CFT1YDR301W SCY1P53009 804 aa2.15□□□□□ -2.07
CFT1YDR301W DNM1P54861 757 aa2.15□□□□□ -2.07
CFT1YDR301W FRK1Q03002 865 aaPredicted RBP2.15□□□□□ -2.07
CFT1YDR301W ATG13Q06628 738 aa2.15□□□□□ -2.07
CFT1YDR301W SWI1P09547 1314 aa2.14□□□□□ -2.07
CFT1YDR301W YIL092WP40497 633 aa2.14□□□□□ -2.07
CFT1YDR301W PAP2P53632 584 aaKnown RBP2.14□□□□□ -2.07
CFT1YDR301W SRT1Q03175 343 aa2.14□□□□□ -2.07
CFT1YDR301W MTC5Q03897 1148 aa2.14□□□□□ -2.07
CFT1YDR301W GRE2Q12068 342 aaKnown RBP2.14□□□□□ -2.07
CFT1YDR301W NOP53Q12080 455 aaKnown RBP2.14□□□□□ -2.07
CFT1YDR301W CST6P40535 587 aa2.14□□□□□ -2.07
CFT1YDR301W NYV1Q12255 253 aa2.14□□□□□ -2.07
CFT1YDR301W ARG8P18544 423 aa2.14□□□□□ -2.07
CFT1YDR301W SPT21P35209 758 aa2.14□□□□□ -2.07
CFT1YDR301W RPN11P43588 306 aaKnown RBP2.14□□□□□ -2.07
CFT1YDR301W ALD2P47771 506 aa2.14□□□□□ -2.07
CFT1YDR301W BUG1Q12191 341 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 73.4 ms