RNA–Protein interactions for RNA: YDR004W

RAD57, Transcript of Protein that stimulates strand exchange, yeast

Gene RAD57, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD57	YDR004W	YJL007C	P47080	104 aa		7.45	□□□□□ -1.22
RAD57	YDR004W	KTR1	P27810	393 aa	Known RBP	7.44	□□□□□ -1.22
RAD57	YDR004W	ISU2	Q12056	156 aa		7.44	□□□□□ -1.22
RAD57	YDR004W	RPO21	P04050	1733 aa	Known RBP	7.44	□□□□□ -1.22
RAD57	YDR004W	SUB2	Q07478	446 aa	Known RBP	7.43	□□□□□ -1.22
RAD57	YDR004W	TRM732	Q03496	1420 aa		7.43	□□□□□ -1.22
RAD57	YDR004W	PKH3	Q03306	898 aa	Predicted RBP	7.42	□□□□□ -1.22
RAD57	YDR004W	MPC54	Q08550	464 aa		7.42	□□□□□ -1.22
RAD57	YDR004W	YRR1	Q12172	810 aa		7.42	□□□□□ -1.22
RAD57	YDR004W	POL1	P13382	1468 aa		7.41	□□□□□ -1.22
RAD57	YDR004W	YBL036C	P38197	257 aa		7.41	□□□□□ -1.22
RAD57	YDR004W	PTC2	P39966	464 aa	Known RBP	7.41	□□□□□ -1.22
RAD57	YDR004W	BIM1	P40013	344 aa		7.41	□□□□□ -1.22
RAD57	YDR004W	SSA1	P10591	642 aa	Known RBP	7.4	□□□□□ -1.22
RAD57	YDR004W	SCJ1	P25303	377 aa		7.4	□□□□□ -1.22
RAD57	YDR004W	GEF1	P37020	779 aa		7.4	□□□□□ -1.22
RAD57	YDR004W	SLX8	P40072	274 aa		7.4	□□□□□ -1.22
RAD57	YDR004W	RPL34B	P40525	121 aa	Known RBP	7.4	□□□□□ -1.22
RAD57	YDR004W	VPS15	P22219	1454 aa		7.4	□□□□□ -1.23
RAD57	YDR004W	NUP159	P40477	1460 aa		7.4	□□□□□ -1.23
RAD57	YDR004W	MMS1	Q06211	1407 aa		7.39	□□□□□ -1.23
RAD57	YDR004W	SIT4	P20604	311 aa		7.39	□□□□□ -1.23
RAD57	YDR004W	ESS1	P22696	170 aa		7.39	□□□□□ -1.23
RAD57	YDR004W	NMA111	P53920	997 aa		7.39	□□□□□ -1.23
RAD57	YDR004W	DNF2	Q12675	1612 aa		7.38	□□□□□ -1.23
RAD57	YDR004W	YOR1	P53049	1477 aa		7.37	□□□□□ -1.23
RAD57	YDR004W	CSE4	P36012	229 aa		7.37	□□□□□ -1.23
RAD57	YDR004W	RAD59	Q12223	238 aa		7.37	□□□□□ -1.23
RAD57	YDR004W	SPP41	P38904	1435 aa		7.37	□□□□□ -1.23
RAD57	YDR004W	STU1	P38198	1513 aa		7.36	□□□□□ -1.23
RAD57	YDR004W	ARG8	P18544	423 aa		7.36	□□□□□ -1.23
RAD57	YDR004W	SLY41	P22215	453 aa		7.36	□□□□□ -1.23
RAD57	YDR004W	VTH1	P40438	1549 aa		7.36	□□□□□ -1.23
RAD57	YDR004W	VTH2	P40890	1549 aa		7.36	□□□□□ -1.23
RAD57	YDR004W	ATG32	P40458	529 aa		7.35	□□□□□ -1.23
RAD57	YDR004W	YNL115C	P53925	644 aa		7.35	□□□□□ -1.23
RAD57	YDR004W	SMC4	Q12267	1418 aa		7.35	□□□□□ -1.23
RAD57	YDR004W	NPL4	P33755	580 aa		7.34	□□□□□ -1.23
RAD57	YDR004W	YJU3	P28321	313 aa		7.33	□□□□□ -1.24
RAD57	YDR004W	RTF1	P53064	558 aa		7.33	□□□□□ -1.24
RAD57	YDR004W	DRS2	P39524	1355 aa		7.33	□□□□□ -1.24
RAD57	YDR004W	TIF1	P10081	395 aa	Known RBP	7.32	□□□□□ -1.24
RAD57	YDR004W	LAM6	Q08001	693 aa		7.32	□□□□□ -1.24
RAD57	YDR004W	SPO14	P36126	1683 aa		7.31	□□□□□ -1.24
RAD57	YDR004W	TSC11	P40061	1430 aa		7.31	□□□□□ -1.24
RAD57	YDR004W	NUD1	P32336	851 aa		7.31	□□□□□ -1.24
RAD57	YDR004W	DOP1	Q03921	1698 aa		7.3	□□□□□ -1.24
RAD57	YDR004W	AMS1	P22855	1083 aa		7.3	□□□□□ -1.24
RAD57	YDR004W	ORC1	P54784	914 aa	Predicted RBP	7.3	□□□□□ -1.24
RAD57	YDR004W	RTG2	P32608	588 aa	Known RBP	7.29	□□□□□ -1.24
RAD57	YDR004W	PUS6	P53294	404 aa		7.29	□□□□□ -1.24
RAD57	YDR004W	YNL108C	P53929	270 aa		7.29	□□□□□ -1.24
RAD57	YDR004W	ERG12	P07277	443 aa		7.28	□□□□□ -1.24
RAD57	YDR004W	KEX2	P13134	814 aa		7.28	□□□□□ -1.24
RAD57	YDR004W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	7.28	□□□□□ -1.24	not detected
RAD57	YDR004W	RSC30	P38781	883 aa		7.27	□□□□□ -1.25
RAD57	YDR004W	NUP170	P38181	1502 aa		7.26	□□□□□ -1.25
RAD57	YDR004W	SSA4	P22202	642 aa	Known RBP	7.26	□□□□□ -1.25
RAD57	YDR004W	SPT5	P27692	1063 aa	Known RBP	7.26	□□□□□ -1.25
RAD57	YDR004W	BIO2	P32451	375 aa		7.26	□□□□□ -1.25
RAD57	YDR004W	TBF1	Q02457	562 aa		7.26	□□□□□ -1.25
RAD57	YDR004W	YPR015C	Q12531	247 aa		7.26	□□□□□ -1.25
RAD57	YDR004W	ULS1	Q08562	1619 aa		7.25	□□□□□ -1.25
RAD57	YDR004W	YPR204W	Q08995	1032 aa		7.25	□□□□□ -1.25
RAD57	YDR004W	SNQ2	P32568	1501 aa	Known RBP	7.25	□□□□□ -1.25
RAD57	YDR004W	PDR1	P12383	1068 aa		7.24	□□□□□ -1.25
RAD57	YDR004W	GCD11	P32481	527 aa	Known RBP	7.24	□□□□□ -1.25
RAD57	YDR004W	MYO4	P32492	1471 aa		7.24	□□□□□ -1.25
RAD57	YDR004W	MAK16	P10962	306 aa	Predicted RBP	7.23	□□□□□ -1.25
RAD57	YDR004W	TRM1	P15565	570 aa	Known RBP	7.23	□□□□□ -1.25
RAD57	YDR004W	CPS1	P27614	576 aa		7.23	□□□□□ -1.25
RAD57	YDR004W	ERF2	Q06551	359 aa		7.23	□□□□□ -1.25
RAD57	YDR004W	AIM44	Q99299	758 aa		7.23	□□□□□ -1.25
RAD57	YDR004W	SUP45	P12385	437 aa	Known RBP	7.22	□□□□□ -1.25
RAD57	YDR004W	MRX12	P47084	519 aa		7.22	□□□□□ -1.25
RAD57	YDR004W	ISM1	P48526	1002 aa		7.21	□□□□□ -1.25
RAD57	YDR004W	TTI1	P36097	1038 aa		7.2	□□□□□ -1.26
RAD57	YDR004W	YDJ1	P25491	409 aa	Known RBP	7.2	□□□□□ -1.26
RAD57	YDR004W	NOB1	Q08444	459 aa	Known RBP	7.2	□□□□□ -1.26
RAD57	YDR004W	YOR093C	Q12275	1648 aa		7.2	□□□□□ -1.26
RAD57	YDR004W	SNT2	P53127	1403 aa		7.19	□□□□□ -1.26
RAD57	YDR004W	YPP1	P46951	817 aa		7.19	□□□□□ -1.26
RAD57	YDR004W	STR2	P47164	639 aa		7.19	□□□□□ -1.26
RAD57	YDR004W	SDH2	P21801	266 aa		7.18	□□□□□ -1.26
RAD57	YDR004W	RAM1	P22007	431 aa		7.18	□□□□□ -1.26
RAD57	YDR004W	NAF1	P53919	492 aa	Known RBP	7.18	□□□□□ -1.26
RAD57	YDR004W	MLP2	P40457	1679 aa		7.17	□□□□□ -1.26
RAD57	YDR004W	ENO2	P00925	437 aa	Known RBP	7.17	□□□□□ -1.26
RAD57	YDR004W	PAT1	P25644	796 aa	Known RBP	7.17	□□□□□ -1.26
RAD57	YDR004W	SIS2	P36024	562 aa		7.17	□□□□□ -1.26
RAD57	YDR004W	TUB4	P53378	473 aa		7.17	□□□□□ -1.26
RAD57	YDR004W	YDL206W	Q12424	762 aa		7.16	□□□□□ -1.26
RAD57	YDR004W	RPA14	P50106	137 aa		7.15	□□□□□ -1.26
RAD57	YDR004W	BUD20	Q08004	166 aa	Predicted RBP	7.15	□□□□□ -1.26
RAD57	YDR004W	PDR12	Q02785	1511 aa		7.14	□□□□□ -1.27
RAD57	YDR004W	PRT1	P06103	763 aa	Known RBP	7.14	□□□□□ -1.27
RAD57	YDR004W	GDB1	Q06625	1536 aa		7.13	□□□□□ -1.27
RAD57	YDR004W	ENO1	P00924	437 aa	Known RBP	7.13	□□□□□ -1.27
RAD57	YDR004W	SEC2	P17065	759 aa		7.13	□□□□□ -1.27
RAD57	YDR004W	RPL34A	P87262	121 aa	Predicted RBP	7.13	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms