RNA–Protein interactions for RNA: YDL210W

UGA4, Transcript of GABA (gamma-aminobutyrate) permease, yeast

Gene UGA4, Length 1,716 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UGA4	YDL210W	SAP155	P43612	1002 aa		11.94	□□□□□ -0.5
UGA4	YDL210W	HEF3	P53978	1044 aa	Known RBP	11.94	□□□□□ -0.5
UGA4	YDL210W	RTT109	Q07794	436 aa		11.94	□□□□□ -0.5
UGA4	YDL210W	YFR016C	P43597	1233 aa	Known RBP	11.92	□□□□□ -0.5
UGA4	YDL210W	TPD3	P31383	635 aa		11.91	□□□□□ -0.5
UGA4	YDL210W	COB	P00163	385 aa		11.91	□□□□□ -0.5
UGA4	YDL210W	MEC3	Q02574	474 aa		11.91	□□□□□ -0.5
UGA4	YDL210W	YMR074C	Q04773	145 aa		11.91	□□□□□ -0.5
UGA4	YDL210W	CTF4	Q01454	927 aa		11.9	□□□□□ -0.5
UGA4	YDL210W	CDC45	Q08032	650 aa		11.9	□□□□□ -0.5
UGA4	YDL210W	RVB2	Q12464	471 aa	Known RBP	11.9	□□□□□ -0.5
UGA4	YDL210W	YKR075C	P36155	307 aa		11.89	□□□□□ -0.51
UGA4	YDL210W	YNL050C	P53952	270 aa		11.89	□□□□□ -0.51
UGA4	YDL210W	AOS1	Q06624	347 aa		11.89	□□□□□ -0.51
UGA4	YDL210W	OSM1	P21375	501 aa	Known RBP	11.88	□□□□□ -0.51
UGA4	YDL210W	RPN11	P43588	306 aa	Known RBP	11.87	□□□□□ -0.51
UGA4	YDL210W	ATG13	Q06628	738 aa		11.84	□□□□□ -0.51
UGA4	YDL210W	FUN12	P39730	1002 aa	Known RBP	11.83	□□□□□ -0.52
UGA4	YDL210W	KCC4	P25389	1037 aa		11.83	□□□□□ -0.52
UGA4	YDL210W	BUD31	P25337	157 aa	Predicted RBP	11.82	□□□□□ -0.52
UGA4	YDL210W	NPR2	P39923	615 aa		11.82	□□□□□ -0.52
UGA4	YDL210W	RRT14	P40470	206 aa		11.82	□□□□□ -0.52
UGA4	YDL210W	UTP10	P42945	1769 aa	Known RBP	11.81	□□□□□ -0.52
UGA4	YDL210W	ZDS1	P50111	915 aa	Known RBP	11.81	□□□□□ -0.52
UGA4	YDL210W	ALE1	Q08548	619 aa		11.81	□□□□□ -0.52
UGA4	YDL210W	YBR287W	P38355	427 aa		11.8	□□□□□ -0.52
UGA4	YDL210W	GYP7	P48365	746 aa		11.8	□□□□□ -0.52
UGA4	YDL210W	COQ4	O13525	335 aa		11.79	□□□□□ -0.52
UGA4	YDL210W	MAM1	P40065	302 aa		11.79	□□□□□ -0.52
UGA4	YDL210W	YBP2	P53169	641 aa		11.79	□□□□□ -0.52
UGA4	YDL210W	LAM6	Q08001	693 aa		11.79	□□□□□ -0.52
UGA4	YDL210W	BMS1	Q08965	1183 aa	Known RBP	11.79	□□□□□ -0.52
UGA4	YDL210W	UGA3	P26370	528 aa		11.78	□□□□□ -0.52
UGA4	YDL210W	TUM1	Q08686	304 aa	Known RBP	11.77	□□□□□ -0.52
UGA4	YDL210W	LYS2	P07702	1392 aa		11.77	□□□□□ -0.53
UGA4	YDL210W	EDE1	P34216	1381 aa		11.77	□□□□□ -0.53
UGA4	YDL210W	SRT1	Q03175	343 aa		11.76	□□□□□ -0.53
UGA4	YDL210W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	11.76	□□□□□ -0.53	not detected
UGA4	YDL210W	NSE3	Q05541	303 aa		11.76	□□□□□ -0.53
UGA4	YDL210W	PRP40	P33203	583 aa	Known RBP	11.75	□□□□□ -0.53
UGA4	YDL210W	RPS0B	P46654	252 aa	Known RBP	11.74	□□□□□ -0.53
UGA4	YDL210W	YRB30	P53107	440 aa	Predicted RBP	11.74	□□□□□ -0.53
UGA4	YDL210W	YJL181W	P46987	611 aa		11.74	□□□□□ -0.53
UGA4	YDL210W	LYS4	P49367	693 aa	Predicted RBP	11.73	□□□□□ -0.53
UGA4	YDL210W	RMT2	Q03305	412 aa		11.73	□□□□□ -0.53
UGA4	YDL210W	YIL092W	P40497	633 aa		11.72	□□□□□ -0.53
UGA4	YDL210W	RAD4	P14736	754 aa		11.72	□□□□□ -0.53
UGA4	YDL210W	UBP1	P25037	809 aa		11.72	□□□□□ -0.53
UGA4	YDL210W	GRX1	P25373	110 aa	Known RBP	11.72	□□□□□ -0.53
UGA4	YDL210W	ZDS2	P54786	942 aa		11.72	□□□□□ -0.53
UGA4	YDL210W	DAL5	P15365	543 aa		11.7	□□□□□ -0.54
UGA4	YDL210W	YOL057W	Q08225	711 aa		11.69	□□□□□ -0.54
UGA4	YDL210W	NOP53	Q12080	455 aa	Known RBP	11.69	□□□□□ -0.54
UGA4	YDL210W	MSB4	Q12317	492 aa		11.68	□□□□□ -0.54
UGA4	YDL210W	CTH1	P47976	325 aa		11.67	□□□□□ -0.54
UGA4	YDL210W	GRE2	Q12068	342 aa	Known RBP	11.67	□□□□□ -0.54
UGA4	YDL210W	YGR122W	P53272	402 aa		11.66	□□□□□ -0.54
UGA4	YDL210W	MAK21	Q12176	1025 aa	Known RBP	11.66	□□□□□ -0.54
UGA4	YDL210W	YDR306C	Q06640	478 aa		11.65	□□□□□ -0.54
UGA4	YDL210W	APL2	P36000	726 aa	Predicted RBP	11.64	□□□□□ -0.55
UGA4	YDL210W	RAD2	P07276	1031 aa		11.63	□□□□□ -0.55
UGA4	YDL210W	ARG8	P18544	423 aa		11.63	□□□□□ -0.55
UGA4	YDL210W	CSI1	Q04368	295 aa		11.63	□□□□□ -0.55
UGA4	YDL210W	SWI1	P09547	1314 aa		11.62	□□□□□ -0.55
UGA4	YDL210W	DCD1	P06773	312 aa		11.62	□□□□□ -0.55
UGA4	YDL210W	MRP7	P12687	371 aa		11.62	□□□□□ -0.55
UGA4	YDL210W	RAD24	P32641	659 aa		11.62	□□□□□ -0.55
UGA4	YDL210W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	11.62	□□□□□ -0.55	not detected
UGA4	YDL210W	YPP1	P46951	817 aa		11.62	□□□□□ -0.55
UGA4	YDL210W	TEA1	P47988	759 aa		11.62	□□□□□ -0.55
UGA4	YDL210W	VPS64	Q03944	604 aa		11.62	□□□□□ -0.55
UGA4	YDL210W	SSP2	Q08646	371 aa		11.62	□□□□□ -0.55
UGA4	YDL210W	YPR204W	Q08995	1032 aa		11.62	□□□□□ -0.55
UGA4	YDL210W	PHM7	Q12252	991 aa		11.62	□□□□□ -0.55
UGA4	YDL210W	PRI1	P10363	409 aa		11.61	□□□□□ -0.55
UGA4	YDL210W	YBL086C	P38177	466 aa		11.61	□□□□□ -0.55
UGA4	YDL210W	NYV1	Q12255	253 aa		11.61	□□□□□ -0.55
UGA4	YDL210W	TRP5	P00931	707 aa	Known RBP	11.6	□□□□□ -0.55
UGA4	YDL210W	TCB2	P48231	1178 aa		11.6	□□□□□ -0.55
UGA4	YDL210W	ILV3	P39522	585 aa	Known RBP	11.59	□□□□□ -0.55
UGA4	YDL210W	POL32	P47110	350 aa		11.59	□□□□□ -0.55
UGA4	YDL210W	SWC3	P31376	625 aa		11.58	□□□□□ -0.56
UGA4	YDL210W	YGL082W	P53155	381 aa		11.58	□□□□□ -0.56
UGA4	YDL210W	MDG1	P53885	366 aa		11.58	□□□□□ -0.56
UGA4	YDL210W	NUP133	P36161	1157 aa		11.57	□□□□□ -0.56
UGA4	YDL210W	DNM1	P54861	757 aa		11.57	□□□□□ -0.56
UGA4	YDL210W	BUG1	Q12191	341 aa		11.57	□□□□□ -0.56
UGA4	YDL210W	SER1	P33330	395 aa	Known RBP	11.57	□□□□□ -0.56
UGA4	YDL210W	BDF1	P35817	686 aa		11.57	□□□□□ -0.56
UGA4	YDL210W	CST6	P40535	587 aa		11.57	□□□□□ -0.56
UGA4	YDL210W	RPG1	P38249	964 aa	Known RBP	11.56	□□□□□ -0.56
UGA4	YDL210W	PMD1	P32634	1753 aa		11.56	□□□□□ -0.56
UGA4	YDL210W	SSA2	P10592	639 aa	Known RBP	11.55	□□□□□ -0.56
UGA4	YDL210W	YJR008W	P47085	338 aa		11.55	□□□□□ -0.56
UGA4	YDL210W	ALD2	P47771	506 aa		11.55	□□□□□ -0.56
UGA4	YDL210W	CWC22	P53333	577 aa	Known RBP	11.55	□□□□□ -0.56
UGA4	YDL210W	RPS19A	P07280	144 aa	Known RBP	11.55	□□□□□ -0.56
UGA4	YDL210W	RPS19B	P07281	144 aa	Predicted RBP	11.55	□□□□□ -0.56
UGA4	YDL210W	PUF6	Q04373	656 aa	Known RBP	11.55	□□□□□ -0.56
UGA4	YDL210W	BOI2	P39969	1040 aa		11.53	□□□□□ -0.56

Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms