RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C YEL077CQ3E7X8 1277 aa2.26□□□□□ -2.05
MSH3YCR092C TY4B-HP0C2J7 1802 aa2.26□□□□□ -2.05
MSH3YCR092C TY4B-JP47024 1803 aa2.26□□□□□ -2.05
MSH3YCR092C YRF1-3P0CX14 1859 aa2.26□□□□□ -2.05
MSH3YCR092C YRF1-7P0CX15 1859 aa2.26□□□□□ -2.05
MSH3YCR092C CHL1P22516 861 aaPredicted RBP2.26□□□□□ -2.05
MSH3YCR092C YRF1-6P53819 1859 aa2.26□□□□□ -2.05
MSH3YCR092C PML39Q03760 334 aa2.26□□□□□ -2.05
MSH3YCR092C VRP1P37370 817 aa2.25□□□□□ -2.05
MSH3YCR092C RSF2P46974 1380 aa2.25□□□□□ -2.05
MSH3YCR092C PRE3P38624 215 aa2.25□□□□□ -2.05
MSH3YCR092C GCR2Q01722 534 aa2.25□□□□□ -2.05
MSH3YCR092C MAK11P20484 414 aaKnown RBP2.24□□□□□ -2.05
MSH3YCR092C YFR016CP43597 1233 aaKnown RBP2.24□□□□□ -2.05
MSH3YCR092C RAM2P29703 316 aa2.23□□□□□ -2.05
MSH3YCR092C SPT23P35210 1082 aa2.23□□□□□ -2.05
MSH3YCR092C RIM15P43565 1770 aa2.23□□□□□ -2.05
MSH3YCR092C ERG12P07277 443 aa2.23□□□□□ -2.05
MSH3YCR092C GUT1P32190 709 aa2.23□□□□□ -2.05
MSH3YCR092C PTC3P34221 468 aaKnown RBP2.23□□□□□ -2.05
MSH3YCR092C EDS1P38073 919 aa2.23□□□□□ -2.05
MSH3YCR092C SIR4P11978 1358 aa2.23□□□□□ -2.05
MSH3YCR092C UTP10P42945 1769 aaKnown RBP2.22□□□□□ -2.05
MSH3YCR092C NST1P53935 1240 aa2.22□□□□□ -2.05
MSH3YCR092C POM152P39685 1337 aa2.22□□□□□ -2.05
MSH3YCR092C DPS1P04802 557 aaKnown RBP2.22□□□□□ -2.05
MSH3YCR092C UBP1P25037 809 aa2.22□□□□□ -2.05
MSH3YCR092C NAP1P25293 417 aaKnown RBP2.22□□□□□ -2.05
MSH3YCR092C RAD54P32863 898 aa2.22□□□□□ -2.05
MSH3YCR092C THI12P42883 340 aa2.21□□□□□ -2.05
MSH3YCR092C THI5P43534 340 aa2.21□□□□□ -2.05
MSH3YCR092C THI11P47183 340 aa2.21□□□□□ -2.05
MSH3YCR092C THI13Q07748 340 aa2.21□□□□□ -2.05
MSH3YCR092C YML133CQ03099 1374 aa2.21□□□□□ -2.06
MSH3YCR092C YNR029CP53729 429 aaKnown RBP2.21□□□□□ -2.06
MSH3YCR092C COQ8P27697 501 aa2.21□□□□□ -2.06
MSH3YCR092C GAR1P28007 205 aaKnown RBP2.21□□□□□ -2.06
MSH3YCR092C YDR344CQ05510 147 aa2.21□□□□□ -2.06
MSH3YCR092C BUD21Q08492 214 aaPredicted RBP2.21□□□□□ -2.06
MSH3YCR092C SPB4P25808 606 aaPredicted RBP2.2□□□□□ -2.06
MSH3YCR092C MRF1P30775 413 aaPredicted RBP2.2□□□□□ -2.06
MSH3YCR092C SOL3P38858 249 aa2.2□□□□□ -2.06
MSH3YCR092C LYS2P07702 1392 aa2.2□□□□□ -2.06
MSH3YCR092C RAD9P14737 1309 aa2.2□□□□□ -2.06
MSH3YCR092C SSA1P10591 642 aaKnown RBP2.2□□□□□ -2.06
MSH3YCR092C SPT16P32558 1035 aaKnown RBP2.2□□□□□ -2.06
MSH3YCR092C XDJ1P39102 459 aa2.2□□□□□ -2.06
MSH3YCR092C ARH1P48360 493 aa2.2□□□□□ -2.06
MSH3YCR092C AI4P03878 556 aa2.19□□□□□ -2.06
MSH3YCR092C MPH3P0CE00 602 aa2.19□□□□□ -2.06
MSH3YCR092C NOP53Q12080 455 aaKnown RBP2.19□□□□□ -2.06
MSH3YCR092C GCD11P32481 527 aaKnown RBP2.19□□□□□ -2.06
MSH3YCR092C SRF1Q12516 437 aa2.19□□□□□ -2.06
MSH3YCR092C MID1P41821 548 aa2.19□□□□□ -2.06
MSH3YCR092C ALD4P46367 519 aaKnown RBP2.18□□□□□ -2.06
MSH3YCR092C HAP5Q02516 242 aa2.18□□□□□ -2.06
MSH3YCR092C YRF1-4O13559 1382 aa2.18□□□□□ -2.06
MSH3YCR092C ILV3P39522 585 aaKnown RBP2.17□□□□□ -2.06
MSH3YCR092C TBF1Q02457 562 aa2.17□□□□□ -2.06
MSH3YCR092C IMH1Q06704 911 aaKnown RBP2.17□□□□□ -2.06
MSH3YCR092C VHR2P40041 505 aa2.16□□□□□ -2.06
MSH3YCR092C YGR273CP53329 174 aa2.16□□□□□ -2.06
MSH3YCR092C FIG2P25653 1609 aa2.16□□□□□ -2.06
MSH3YCR092C VPS70P47161 811 aa2.16□□□□□ -2.06
MSH3YCR092C HST3P53687 447 aa2.16□□□□□ -2.06
MSH3YCR092C CTF4Q01454 927 aa2.16□□□□□ -2.06
MSH3YCR092C UGA2P38067 497 aa2.16□□□□□ -2.06
MSH3YCR092C ALD2P47771 506 aa2.16□□□□□ -2.06
MSH3YCR092C UTP22P53254 1237 aaPredicted RBP2.16□□□□□ -2.06
MSH3YCR092C TYW1Q08960 810 aaKnown RBP2.16□□□□□ -2.06
MSH3YCR092C MHP1P43638 1398 aa2.15□□□□□ -2.06
MSH3YCR092C BNI4P53858 892 aa2.15□□□□□ -2.06
MSH3YCR092C YML082WQ04533 649 aaKnown RBP2.15□□□□□ -2.07
MSH3YCR092C ESL2P36168 1195 aa2.14□□□□□ -2.07
MSH3YCR092C PAF1P38351 445 aa2.14□□□□□ -2.07
MSH3YCR092C MDG1P53885 366 aa2.14□□□□□ -2.07
MSH3YCR092C MPC54Q08550 464 aa2.14□□□□□ -2.07
MSH3YCR092C SSK22P25390 1331 aaPredicted RBP2.14□□□□□ -2.07
MSH3YCR092C MRX12P47084 519 aa2.14□□□□□ -2.07
MSH3YCR092C ISU2Q12056 156 aa2.14□□□□□ -2.07
MSH3YCR092C CPS1P27614 576 aa2.14□□□□□ -2.07
MSH3YCR092C SLI15P38283 698 aa2.14□□□□□ -2.07
MSH3YCR092C DPL1Q05567 589 aa2.14□□□□□ -2.07
MSH3YCR092C ENV9Q08651 330 aa2.14□□□□□ -2.07
MSH3YCR092C RAD4P14736 754 aa2.13□□□□□ -2.07
MSH3YCR092C TYS1P36421 394 aaKnown RBP2.13□□□□□ -2.07
MSH3YCR092C MTR4P47047 1073 aaKnown RBP2.13□□□□□ -2.07
MSH3YCR092C NMA111P53920 997 aa2.13□□□□□ -2.07
MSH3YCR092C FRK1Q03002 865 aaPredicted RBP2.13□□□□□ -2.07
MSH3YCR092C YRR1Q12172 810 aa2.13□□□□□ -2.07
MSH3YCR092C MLP1Q02455 1875 aaKnown RBP2.13□□□□□ -2.07
MSH3YCR092C TRK1P12685 1235 aa2.12□□□□□ -2.07
MSH3YCR092C ATF2P53296 535 aa2.12□□□□□ -2.07
MSH3YCR092C MEC3Q02574 474 aa2.12□□□□□ -2.07
MSH3YCR092C HKR1P41809 1802 aa2.12□□□□□ -2.07
MSH3YCR092C KEX1P09620 729 aa2.11□□□□□ -2.07
MSH3YCR092C CKB1P43639 278 aa2.11□□□□□ -2.07
MSH3YCR092C DIB1Q06819 143 aaPredicted RBP2.11□□□□□ -2.07
MSH3YCR092C KIP2P28743 706 aa2.11□□□□□ -2.07
MSH3YCR092C ALD3P54114 506 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms