RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C BUD31P25337 157 aaPredicted RBP17.09■□□□□ 0.33
SSA1YAL005C YNL050CP53952 270 aa17.08■□□□□ 0.33
SSA1YAL005C ATG13Q06628 738 aa17.08■□□□□ 0.33
SSA1YAL005C RTT109Q07794 436 aa17.08■□□□□ 0.32
SSA1YAL005C VPS27P40343 622 aaKnown RBP17.07■□□□□ 0.32
SSA1YAL005C SAP155P43612 1002 aa17.07■□□□□ 0.32
SSA1YAL005C SUI2P20459 304 aaKnown RBP17.06■□□□□ 0.32
SSA1YAL005C NPR2P39923 615 aa17.06■□□□□ 0.32
SSA1YAL005C HEF3P53978 1044 aaKnown RBP17.06■□□□□ 0.32
SSA1YAL005C LAM6Q08001 693 aa17.06■□□□□ 0.32
SSA1YAL005C TPD3P31383 635 aa17.05■□□□□ 0.32
SSA1YAL005C YJL181WP46987 611 aa17.02■□□□□ 0.31
SSA1YAL005C CDC45Q08032 650 aa17.02■□□□□ 0.31
SSA1YAL005C RIM15P43565 1770 aa17.01■□□□□ 0.31
SSA1YAL005C KCC4P25389 1037 aa17.01■□□□□ 0.31
SSA1YAL005C PRP40P33203 583 aaKnown RBP17.01■□□□□ 0.31
SSA1YAL005C ZDS1P50111 915 aaKnown RBP16.99■□□□□ 0.31
SSA1YAL005C YBP2P53169 641 aa16.99■□□□□ 0.31
SSA1YAL005C UBP1P25037 809 aa16.98■□□□□ 0.31
SSA1YAL005C RVB2Q12464 471 aaKnown RBP16.98■□□□□ 0.31
SSA1YAL005C EDE1P34216 1381 aa16.97■□□□□ 0.31
SSA1YAL005C RRT14P40470 206 aa16.96■□□□□ 0.31
SSA1YAL005C ALE1Q08548 619 aa16.96■□□□□ 0.3
SSA1YAL005C UGA3P26370 528 aa16.95■□□□□ 0.3
SSA1YAL005C LYS4P49367 693 aaPredicted RBP16.95■□□□□ 0.3
SSA1YAL005C TUM1Q08686 304 aaKnown RBP16.95■□□□□ 0.3
SSA1YAL005C MAM1P40065 302 aa16.94■□□□□ 0.3
SSA1YAL005C GYP7P48365 746 aa16.93■□□□□ 0.3
SSA1YAL005C YBR287WP38355 427 aa16.92■□□□□ 0.3
SSA1YAL005C BMS1Q08965 1183 aaKnown RBP16.92■□□□□ 0.3
SSA1YAL005C NSE3Q05541 303 aa16.92■□□□□ 0.3
SSA1YAL005C COQ4O13525 335 aa16.91■□□□□ 0.3
SSA1YAL005C GRX1P25373 110 aaKnown RBP16.91■□□□□ 0.3
SSA1YAL005C PRI1P10363 409 aa16.89■□□□□ 0.29
SSA1YAL005C RMT2Q03305 412 aa16.88■□□□□ 0.29
SSA1YAL005C MSB4Q12317 492 aa16.88■□□□□ 0.29
SSA1YAL005C SRT1Q03175 343 aa16.85■□□□□ 0.29
SSA1YAL005C LYS2P07702 1392 aa16.85■□□□□ 0.29
SSA1YAL005C FUN12P39730 1002 aaKnown RBP16.84■□□□□ 0.29
SSA1YAL005C CTH1P47976 325 aa16.84■□□□□ 0.29
SSA1YAL005C GRE2Q12068 342 aaKnown RBP16.84■□□□□ 0.29
SSA1YAL005C YRB30P53107 440 aaPredicted RBP16.83■□□□□ 0.28
SSA1YAL005C NOP53Q12080 455 aaKnown RBP16.83■□□□□ 0.28
SSA1YAL005C RAD4P14736 754 aa16.82■□□□□ 0.28
SSA1YAL005C NAB6Q03735 1134 aaKnown RBP RIP-Chip data16.82■□□□□ 0.28not detected
SSA1YAL005C YBL086CP38177 466 aa16.81■□□□□ 0.28
SSA1YAL005C ZDS2P54786 942 aa16.81■□□□□ 0.28
SSA1YAL005C YOL057WQ08225 711 aa16.79■□□□□ 0.28
SSA1YAL005C ALD2P47771 506 aa16.75■□□□□ 0.27
SSA1YAL005C YIL092WP40497 633 aa16.74■□□□□ 0.27
SSA1YAL005C BUD27P43573 796 aaKnown RBP RIP-Chip data16.74■□□□□ 0.27not detected
SSA1YAL005C SSP2Q08646 371 aa16.74■□□□□ 0.27
SSA1YAL005C PHM7Q12252 991 aa16.74■□□□□ 0.27
SSA1YAL005C DAL5P15365 543 aa16.73■□□□□ 0.27
SSA1YAL005C BDF1P35817 686 aa16.73■□□□□ 0.27
SSA1YAL005C GTT3P39996 337 aa16.73■□□□□ 0.27
SSA1YAL005C TEA1P47988 759 aa16.73■□□□□ 0.27
SSA1YAL005C MAK21Q12176 1025 aaKnown RBP16.73■□□□□ 0.27
SSA1YAL005C SSA2P10592 639 aaKnown RBP16.72■□□□□ 0.27
SSA1YAL005C BUG1Q12191 341 aa16.72■□□□□ 0.27
SSA1YAL005C NYV1Q12255 253 aa16.72■□□□□ 0.27
SSA1YAL005C APL2P36000 726 aaPredicted RBP16.72■□□□□ 0.27
SSA1YAL005C ARG8P18544 423 aa16.71■□□□□ 0.27
SSA1YAL005C MDG1P53885 366 aa16.71■□□□□ 0.27
SSA1YAL005C RPG1P38249 964 aaKnown RBP16.7■□□□□ 0.26
SSA1YAL005C VPS64Q03944 604 aa16.7■□□□□ 0.26
SSA1YAL005C YDR306CQ06640 478 aa16.7■□□□□ 0.26
SSA1YAL005C YPR204WQ08995 1032 aa16.7■□□□□ 0.26
SSA1YAL005C UGA2P38067 497 aa16.69■□□□□ 0.26
SSA1YAL005C YFR016CP43597 1233 aaKnown RBP16.69■□□□□ 0.26
SSA1YAL005C DCD1P06773 312 aa16.68■□□□□ 0.26
SSA1YAL005C YGR122WP53272 402 aa16.68■□□□□ 0.26
SSA1YAL005C SER1P33330 395 aaKnown RBP16.67■□□□□ 0.26
SSA1YAL005C YGL082WP53155 381 aa16.67■□□□□ 0.26
SSA1YAL005C UTP10P42945 1769 aaKnown RBP16.67■□□□□ 0.26
SSA1YAL005C RAD2P07276 1031 aa16.66■□□□□ 0.26
SSA1YAL005C DNM1P54861 757 aa16.66■□□□□ 0.26
SSA1YAL005C MRP7P12687 371 aa16.65■□□□□ 0.26
SSA1YAL005C UTP22P53254 1237 aaPredicted RBP16.65■□□□□ 0.26
SSA1YAL005C SWI1P09547 1314 aa16.65■□□□□ 0.26
SSA1YAL005C YPP1P46951 817 aa16.64■□□□□ 0.25
SSA1YAL005C CSI1Q04368 295 aa16.64■□□□□ 0.25
SSA1YAL005C ALD3P54114 506 aa16.63■□□□□ 0.25
SSA1YAL005C CST6P40535 587 aa16.62■□□□□ 0.25
SSA1YAL005C RAD24P32641 659 aa16.62■□□□□ 0.25
SSA1YAL005C TOS1P38288 455 aa16.62■□□□□ 0.25
SSA1YAL005C NUP133P36161 1157 aa16.61■□□□□ 0.25
SSA1YAL005C YJR008WP47085 338 aa16.6■□□□□ 0.25
SSA1YAL005C RIX7Q07844 837 aaKnown RBP16.6■□□□□ 0.25
SSA1YAL005C SWC3P31376 625 aa16.59■□□□□ 0.25
SSA1YAL005C CTI6Q08923 506 aa16.59■□□□□ 0.25
SSA1YAL005C TRP5P00931 707 aaKnown RBP16.58■□□□□ 0.25
SSA1YAL005C YLR271WQ06152 274 aa16.57■□□□□ 0.24
SSA1YAL005C NOP8Q08287 484 aaPredicted RBP16.57■□□□□ 0.24
SSA1YAL005C RPS19AP07280 144 aaKnown RBP16.55■□□□□ 0.24
SSA1YAL005C RPS19BP07281 144 aaPredicted RBP16.55■□□□□ 0.24
SSA1YAL005C HPC2Q01448 625 aa16.55■□□□□ 0.24
SSA1YAL005C LPD1P09624 499 aaKnown RBP16.55■□□□□ 0.24
SSA1YAL005C FCP1Q03254 732 aa16.55■□□□□ 0.24
SSA1YAL005C POL32P47110 350 aa16.54■□□□□ 0.24
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms