RNA–Protein interactions for RNA: RDN18-2

RDN18-2, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-2, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-2RDN18-2 AOS1Q06624 347 aa12.6□□□□□ -0.39
RDN18-2RDN18-2 COQ4O13525 335 aa12.58□□□□□ -0.4
RDN18-2RDN18-2 YIR014WP40570 242 aa12.58□□□□□ -0.4
RDN18-2RDN18-2 EDE1P34216 1381 aa12.58□□□□□ -0.4
RDN18-2RDN18-2 RCR1P38212 213 aa12.57□□□□□ -0.4
RDN18-2RDN18-2 CSI1Q04368 295 aa12.57□□□□□ -0.4
RDN18-2RDN18-2 XKS1P42826 600 aa12.56□□□□□ -0.4
RDN18-2RDN18-2 CTF4Q01454 927 aa12.54□□□□□ -0.4
RDN18-2RDN18-2 YPP1P46951 817 aa12.53□□□□□ -0.4
RDN18-2RDN18-2 TCB1Q12466 1186 aa12.53□□□□□ -0.4
RDN18-2RDN18-2 YGR122WP53272 402 aa12.53□□□□□ -0.4
RDN18-2RDN18-2 YRF1-3P0CX14 1859 aa12.52□□□□□ -0.4
RDN18-2RDN18-2 YRF1-7P0CX15 1859 aa12.52□□□□□ -0.4
RDN18-2RDN18-2 YRF1-6P53819 1859 aa12.52□□□□□ -0.4
RDN18-2RDN18-2 YNG2P38806 282 aaKnown RBP12.51□□□□□ -0.41
RDN18-2RDN18-2 SPO1P53541 631 aa12.51□□□□□ -0.41
RDN18-2RDN18-2 NUP145P49687 1317 aa12.51□□□□□ -0.41
RDN18-2RDN18-2 INP54Q08227 384 aaKnown RBP12.51□□□□□ -0.41
RDN18-2RDN18-2 RPS19AP07280 144 aaKnown RBP12.5□□□□□ -0.41
RDN18-2RDN18-2 RPS19BP07281 144 aaPredicted RBP12.5□□□□□ -0.41
RDN18-2RDN18-2 KCC4P25389 1037 aa12.49□□□□□ -0.41
RDN18-2RDN18-2 UGA3P26370 528 aa12.49□□□□□ -0.41
RDN18-2RDN18-2 RAD24P32641 659 aa12.48□□□□□ -0.41
RDN18-2RDN18-2 NSE3Q05541 303 aa12.48□□□□□ -0.41
RDN18-2RDN18-2 RSF2P46974 1380 aa12.48□□□□□ -0.41
RDN18-2RDN18-2 LYS2P07702 1392 aa12.46□□□□□ -0.41
RDN18-2RDN18-2 RAD4P14736 754 aa12.46□□□□□ -0.41
RDN18-2RDN18-2 YOL057WQ08225 711 aa12.46□□□□□ -0.41
RDN18-2RDN18-2 PCT1P13259 424 aa12.45□□□□□ -0.42
RDN18-2RDN18-2 MIF2P35201 549 aa12.45□□□□□ -0.42
RDN18-2RDN18-2 REB1P21538 810 aa12.44□□□□□ -0.42
RDN18-2RDN18-2 ZDS2P54786 942 aa12.44□□□□□ -0.42
RDN18-2RDN18-2 NKP2Q06162 153 aa12.44□□□□□ -0.42
RDN18-2RDN18-2 ALE1Q08548 619 aa12.44□□□□□ -0.42
RDN18-2RDN18-2 SWC3P31376 625 aa12.43□□□□□ -0.42
RDN18-2RDN18-2 MRP7P12687 371 aa12.42□□□□□ -0.42
RDN18-2RDN18-2 NMD2P38798 1089 aaKnown RBP12.42□□□□□ -0.42
RDN18-2RDN18-2 ADE16P54113 591 aaKnown RBP12.42□□□□□ -0.42
RDN18-2RDN18-2 YDR306CQ06640 478 aa12.42□□□□□ -0.42
RDN18-2RDN18-2 ENT1Q12518 454 aa12.42□□□□□ -0.42
RDN18-2RDN18-2 RFC1P38630 861 aaKnown RBP12.41□□□□□ -0.42
RDN18-2RDN18-2 OSM1P21375 501 aaKnown RBP12.39□□□□□ -0.43
RDN18-2RDN18-2 ECM16Q04217 1267 aaKnown RBP12.39□□□□□ -0.43
RDN18-2RDN18-2 NOP8Q08287 484 aaPredicted RBP12.39□□□□□ -0.43
RDN18-2RDN18-2 EAF7P53911 425 aaKnown RBP12.39□□□□□ -0.43
RDN18-2RDN18-2 BOI2P39969 1040 aa12.38□□□□□ -0.43
RDN18-2RDN18-2 RAD50P12753 1312 aa12.38□□□□□ -0.43
RDN18-2RDN18-2 GCD7P32502 381 aaPredicted RBP12.37□□□□□ -0.43
RDN18-2RDN18-2 IES2P40154 320 aa12.37□□□□□ -0.43
RDN18-2RDN18-2 RLF2Q12495 606 aa12.37□□□□□ -0.43
RDN18-2RDN18-2 FRK1Q03002 865 aaPredicted RBP12.36□□□□□ -0.43
RDN18-2RDN18-2 ENV9Q08651 330 aa12.36□□□□□ -0.43
RDN18-2RDN18-2 CLC1P17891 233 aa12.35□□□□□ -0.43
RDN18-2RDN18-2 DJP1P40564 432 aa12.35□□□□□ -0.43
RDN18-2RDN18-2 NUP133P36161 1157 aa12.34□□□□□ -0.43
RDN18-2RDN18-2 BRN1P38170 754 aa12.34□□□□□ -0.43
RDN18-2RDN18-2 APP1P53933 587 aa12.34□□□□□ -0.43
RDN18-2RDN18-2 SWI1P09547 1314 aa12.34□□□□□ -0.43
RDN18-2RDN18-2 DLD1P32891 587 aa12.34□□□□□ -0.43
RDN18-2RDN18-2 MEC3Q02574 474 aa12.34□□□□□ -0.43
RDN18-2RDN18-2 YKL133CP36066 463 aa12.33□□□□□ -0.44
RDN18-2RDN18-2 GCR2Q01722 534 aa12.33□□□□□ -0.44
RDN18-2RDN18-2 CDC16P09798 840 aa12.32□□□□□ -0.44
RDN18-2RDN18-2 SNF7P39929 240 aaKnown RBP12.32□□□□□ -0.44
RDN18-2RDN18-2 DNM1P54861 757 aa12.32□□□□□ -0.44
RDN18-2RDN18-2 CST6P40535 587 aa12.31□□□□□ -0.44
RDN18-2RDN18-2 DUR1,2P32528 1835 aaKnown RBP12.3□□□□□ -0.44
RDN18-2RDN18-2 ROX1P25042 368 aa12.3□□□□□ -0.44
RDN18-2RDN18-2 HXT13P39924 564 aa12.3□□□□□ -0.44
RDN18-2RDN18-2 RIM15P43565 1770 aa12.29□□□□□ -0.44
RDN18-2RDN18-2 ROM2P51862 1356 aaKnown RBP12.29□□□□□ -0.44
RDN18-2RDN18-2 YBP2P53169 641 aa12.29□□□□□ -0.44
RDN18-2RDN18-2 HXT17P53631 564 aa12.29□□□□□ -0.44
RDN18-2RDN18-2 ATG13Q06628 738 aa12.29□□□□□ -0.44
RDN18-2RDN18-2 BDP1P46678 594 aa12.28□□□□□ -0.44
RDN18-2RDN18-2 YJR008WP47085 338 aa12.28□□□□□ -0.44
RDN18-2RDN18-2 VPS64Q03944 604 aa12.28□□□□□ -0.44
RDN18-2RDN18-2 TUM1Q08686 304 aaKnown RBP12.28□□□□□ -0.44
RDN18-2RDN18-2 VPS24P36095 224 aaKnown RBP12.27□□□□□ -0.44
RDN18-2RDN18-2 RMT2Q03305 412 aa12.27□□□□□ -0.44
RDN18-2RDN18-2 LPD1P09624 499 aaKnown RBP12.27□□□□□ -0.45
RDN18-2RDN18-2 APL2P36000 726 aaPredicted RBP12.27□□□□□ -0.45
RDN18-2RDN18-2 HGH1P48362 394 aaKnown RBP12.26□□□□□ -0.45
RDN18-2RDN18-2 UBP12P39538 1254 aa12.25□□□□□ -0.45
RDN18-2RDN18-2 SRS2P12954 1174 aa12.25□□□□□ -0.45
RDN18-2RDN18-2 LSP1Q12230 341 aaKnown RBP12.25□□□□□ -0.45
RDN18-2RDN18-2 HXT10P43581 546 aa12.24□□□□□ -0.45
RDN18-2RDN18-2 YPR204WQ08995 1032 aa12.24□□□□□ -0.45
RDN18-2RDN18-2 NOP53Q12080 455 aaKnown RBP12.24□□□□□ -0.45
RDN18-2RDN18-2 VAS1P07806 1104 aaKnown RBP12.23□□□□□ -0.45
RDN18-2RDN18-2 ITC1P53125 1264 aa12.23□□□□□ -0.45
RDN18-2RDN18-2 MSP1P28737 362 aa12.23□□□□□ -0.45
RDN18-2RDN18-2 RMD1Q03441 430 aa12.23□□□□□ -0.45
RDN18-2RDN18-2 IMH1Q06704 911 aaKnown RBP12.23□□□□□ -0.45
RDN18-2RDN18-2 YAH1Q12184 172 aaKnown RBP12.23□□□□□ -0.45
RDN18-2RDN18-2 ARG8P18544 423 aa12.22□□□□□ -0.45
RDN18-2RDN18-2 YPR148CQ06523 435 aa12.22□□□□□ -0.45
RDN18-2RDN18-2 COBP00163 385 aa12.21□□□□□ -0.45
RDN18-2RDN18-2 DCD1P06773 312 aa12.21□□□□□ -0.46
RDN18-2RDN18-2 SET1P38827 1080 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms