RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	GORAB	Q5T7V8	394 aa		7.84	□□□□□ -1.15
NECAP1-222	ENST00000640072	RALBP1	Q15311	655 aa		7.84	□□□□□ -1.15
NECAP1-222	ENST00000640072	HSP90AB3P	Q58FF7	597 aa		7.84	□□□□□ -1.15
NECAP1-222	ENST00000640072	CEP120	Q8N960	986 aa		7.84	□□□□□ -1.15
NECAP1-222	ENST00000640072	CARD10	Q9BWT7	1032 aa		7.84	□□□□□ -1.15
NECAP1-222	ENST00000640072	NFKBIB	Q15653	356 aa		7.84	□□□□□ -1.15
NECAP1-222	ENST00000640072	TCERG1	O14776	1098 aa	Known RBP	7.83	□□□□□ -1.16
NECAP1-222	ENST00000640072	ZNF513	Q8N8E2	541 aa	Predicted RBP	7.83	□□□□□ -1.16
NECAP1-222	ENST00000640072	MAP7D2	Q96T17	732 aa		7.83	□□□□□ -1.16
NECAP1-222	ENST00000640072	TERF2IP	Q9NYB0	399 aa		7.83	□□□□□ -1.16
NECAP1-222	ENST00000640072	MARCH6	O60337	910 aa		7.83	□□□□□ -1.16
NECAP1-222	ENST00000640072	FBXW7	Q969H0	707 aa		7.83	□□□□□ -1.16
NECAP1-222	ENST00000640072	DDRGK1	Q96HY6	314 aa		7.83	□□□□□ -1.16
NECAP1-222	ENST00000640072	ANP32C	O43423	234 aa		7.82	□□□□□ -1.16
NECAP1-222	ENST00000640072	TAF3	Q5VWG9	929 aa		7.82	□□□□□ -1.16
NECAP1-222	ENST00000640072	CCER2	I3L3R5	266 aa		7.82	□□□□□ -1.16
NECAP1-222	ENST00000640072	HNRNPUL2	Q1KMD3	747 aa	Known RBP	7.82	□□□□□ -1.16
NECAP1-222	ENST00000640072	TSHZ1	Q6ZSZ6	1077 aa		7.82	□□□□□ -1.16
NECAP1-222	ENST00000640072	SMAP1	Q8IYB5	467 aa	Predicted RBP	7.82	□□□□□ -1.16
NECAP1-222	ENST00000640072	GOLIM4	O00461	696 aa		7.82	□□□□□ -1.16
NECAP1-222	ENST00000640072	IRF6	O14896	467 aa		7.82	□□□□□ -1.16
NECAP1-222	ENST00000640072	TPD52L2	O43399	206 aa	Known RBP	7.82	□□□□□ -1.16
NECAP1-222	ENST00000640072	NGEF	Q8N5V2	710 aa		7.82	□□□□□ -1.16
NECAP1-222	ENST00000640072	FOXD4	Q12950	439 aa	Predicted RBP	7.81	□□□□□ -1.16
NECAP1-222	ENST00000640072	DCAF11	Q8TEB1	546 aa		7.81	□□□□□ -1.16
NECAP1-222	ENST00000640072	CLCN1	P35523	988 aa		7.81	□□□□□ -1.16
NECAP1-222	ENST00000640072	SSR1	P43307	286 aa	Known RBP	7.81	□□□□□ -1.16
NECAP1-222	ENST00000640072	FOSB	P53539	338 aa		7.81	□□□□□ -1.16
NECAP1-222	ENST00000640072	PEX14	O75381	377 aa		7.8	□□□□□ -1.16
NECAP1-222	ENST00000640072	HNRNPU	Q00839	825 aa	Known RBP eCLIP	7.8	□□□□□ -1.16
NECAP1-222	ENST00000640072	PPP4R3B	Q5MIZ7	849 aa		7.8	□□□□□ -1.16
NECAP1-222	ENST00000640072	GPBP1L1	Q9HC44	474 aa	Predicted RBP	7.8	□□□□□ -1.16
NECAP1-222	ENST00000640072	FAM13B	Q9NYF5	915 aa		7.8	□□□□□ -1.16
NECAP1-222	ENST00000640072	CADPS	Q9ULU8	1353 aa		7.8	□□□□□ -1.16
NECAP1-222	ENST00000640072	BANK1	Q8NDB2	785 aa		7.8	□□□□□ -1.16
NECAP1-222	ENST00000640072	STK24	Q9Y6E0	443 aa		7.8	□□□□□ -1.16
NECAP1-222	ENST00000640072	ZNF500	O60304	480 aa	Predicted RBP	7.79	□□□□□ -1.16
NECAP1-222	ENST00000640072	DHX16	O60231	1041 aa	Known RBP	7.79	□□□□□ -1.16
NECAP1-222	ENST00000640072	PKD2	Q13563	968 aa		7.79	□□□□□ -1.16
NECAP1-222	ENST00000640072	CREBRF	Q8IUR6	639 aa		7.79	□□□□□ -1.16
NECAP1-222	ENST00000640072	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	7.79	□□□□□ -1.16
NECAP1-222	ENST00000640072	CCDC96	Q2M329	555 aa		7.78	□□□□□ -1.16
NECAP1-222	ENST00000640072	NBPF9	Q3BBW0	867 aa		7.78	□□□□□ -1.16
NECAP1-222	ENST00000640072	OTUD6B	Q8N6M0	293 aa		7.78	□□□□□ -1.16
NECAP1-222	ENST00000640072	PPME1	Q9Y570	386 aa		7.78	□□□□□ -1.16
NECAP1-222	ENST00000640072	ANKRD13A	Q8IZ07	590 aa		7.77	□□□□□ -1.16
NECAP1-222	ENST00000640072	DDX10	Q13206	875 aa	Known RBP	7.77	□□□□□ -1.17
NECAP1-222	ENST00000640072	MYBPC2	Q14324	1141 aa		7.76	□□□□□ -1.17
NECAP1-222	ENST00000640072	CCDC181	Q5TID7	509 aa		7.76	□□□□□ -1.17
NECAP1-222	ENST00000640072	PPP1R1B	Q9UD71	204 aa	Predicted RBP	7.76	□□□□□ -1.17
NECAP1-222	ENST00000640072	PIK3R5	Q8WYR1	880 aa		7.76	□□□□□ -1.17
NECAP1-222	ENST00000640072	BAZ1B	Q9UIG0	1483 aa	Known RBP	7.75	□□□□□ -1.17
NECAP1-222	ENST00000640072	NRDC	O43847	1150 aa		7.75	□□□□□ -1.17
NECAP1-222	ENST00000640072	MAP2K1	Q02750	393 aa	Predicted RBP	7.75	□□□□□ -1.17
NECAP1-222	ENST00000640072	KIF4A	O95239	1232 aa		7.75	□□□□□ -1.17
NECAP1-222	ENST00000640072	TMX4	Q9H1E5	349 aa	Predicted RBP	7.75	□□□□□ -1.17
NECAP1-222	ENST00000640072	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
NECAP1-222	ENST00000640072	LMOD3	Q0VAK6	560 aa		7.74	□□□□□ -1.17
NECAP1-222	ENST00000640072	GET4	Q7L5D6	327 aa	Predicted RBP	7.74	□□□□□ -1.17
NECAP1-222	ENST00000640072	EVI5L	Q96CN4	794 aa		7.74	□□□□□ -1.17
NECAP1-222	ENST00000640072	MRVI1	Q9Y6F6	885 aa		7.74	□□□□□ -1.17
NECAP1-222	ENST00000640072	UNC13A	Q9UPW8	1703 aa		7.74	□□□□□ -1.17
NECAP1-222	ENST00000640072	MTERF4	Q7Z6M4	381 aa	Known RBP	7.73	□□□□□ -1.17
NECAP1-222	ENST00000640072	ATL2	Q8NHH9	583 aa		7.73	□□□□□ -1.17
NECAP1-222	ENST00000640072	CHMP4C	Q96CF2	233 aa		7.73	□□□□□ -1.17
NECAP1-222	ENST00000640072	ANKRD62	A6NC57	917 aa		7.73	□□□□□ -1.17
NECAP1-222	ENST00000640072	GOLGA6C	A6NDK9	693 aa		7.73	□□□□□ -1.17
NECAP1-222	ENST00000640072	GOLGA6B	A6NDN3	693 aa		7.73	□□□□□ -1.17
NECAP1-222	ENST00000640072	GOLGA6D	P0CG33	693 aa		7.73	□□□□□ -1.17
NECAP1-222	ENST00000640072	SSFA2	P28290	1259 aa		7.73	□□□□□ -1.17
NECAP1-222	ENST00000640072	HDAC1	Q13547	482 aa	Predicted RBP	7.73	□□□□□ -1.17
NECAP1-222	ENST00000640072	NBPF6	Q5VWK0	638 aa		7.73	□□□□□ -1.17
NECAP1-222	ENST00000640072	NBPF5P	Q86XG9	351 aa	Predicted RBP	7.73	□□□□□ -1.17
NECAP1-222	ENST00000640072	NME8	Q8N427	588 aa		7.73	□□□□□ -1.17
NECAP1-222	ENST00000640072	NBPF4	Q96M43	638 aa		7.73	□□□□□ -1.17
NECAP1-222	ENST00000640072	GOLGA6A	Q9NYA3	693 aa		7.73	□□□□□ -1.17
NECAP1-222	ENST00000640072	PNMA2	Q9UL42	364 aa		7.73	□□□□□ -1.17
NECAP1-222	ENST00000640072	KIAA1211	Q6ZU35	1233 aa		7.73	□□□□□ -1.17
NECAP1-222	ENST00000640072	CCDC97	Q96F63	343 aa	Predicted RBP	7.72	□□□□□ -1.17
NECAP1-222	ENST00000640072	MTA3	Q9BTC8	594 aa		7.72	□□□□□ -1.17
NECAP1-222	ENST00000640072	UTP14C	Q5TAP6	766 aa	Known RBP	7.72	□□□□□ -1.17
NECAP1-222	ENST00000640072	LMOD2	Q6P5Q4	547 aa		7.72	□□□□□ -1.17
NECAP1-222	ENST00000640072	RB1CC1	Q8TDY2	1594 aa		7.71	□□□□□ -1.17
NECAP1-222	ENST00000640072	KIF20A	O95235	890 aa		7.71	□□□□□ -1.17
NECAP1-222	ENST00000640072	MICAL1	Q8TDZ2	1067 aa		7.71	□□□□□ -1.17
NECAP1-222	ENST00000640072	RIOK3	O14730	519 aa	Known RBP	7.71	□□□□□ -1.18
NECAP1-222	ENST00000640072	FRAT2	O75474	233 aa	Predicted RBP	7.71	□□□□□ -1.18
NECAP1-222	ENST00000640072	STK26	Q9P289	416 aa		7.71	□□□□□ -1.18
NECAP1-222	ENST00000640072	GOLGA6L3	A6NEY3	463 aa		7.71	□□□□□ -1.18
NECAP1-222	ENST00000640072	ESPN	B1AK53	854 aa		7.7	□□□□□ -1.18
NECAP1-222	ENST00000640072	PRR29	P0C7W0	189 aa		7.7	□□□□□ -1.18
NECAP1-222	ENST00000640072	DMTN	Q08495	405 aa		7.7	□□□□□ -1.18
NECAP1-222	ENST00000640072	ZNF280D	Q6N043	979 aa		7.7	□□□□□ -1.18
NECAP1-222	ENST00000640072	CGN	Q9P2M7	1197 aa	Known RBP	7.7	□□□□□ -1.18
NECAP1-222	ENST00000640072	TESPA1	A2RU30	521 aa	Predicted RBP	7.7	□□□□□ -1.18
NECAP1-222	ENST00000640072	CT47B1	P0C2W7	299 aa	Predicted RBP	7.7	□□□□□ -1.18
NECAP1-222	ENST00000640072	EP400NL	Q6ZTU2	488 aa		7.7	□□□□□ -1.18
NECAP1-222	ENST00000640072	CALR	P27797	417 aa	Known RBP	7.69	□□□□□ -1.18
NECAP1-222	ENST00000640072	KRBA2	Q6ZNG9	492 aa		7.69	□□□□□ -1.18
NECAP1-222	ENST00000640072	SH3BP5	O60239	455 aa		7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms