RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 CRBNQ96SW2 442 aa18.34■□□□□ 0.53
SCARB2-216ENST00000639300 TRHP20396 242 aaPredicted RBP18.33■□□□□ 0.52
SCARB2-216ENST00000639300 RTF1Q92541 710 aaKnown RBP18.32■□□□□ 0.52
SCARB2-216ENST00000639300 FYCO1Q9BQS8 1478 aa18.31■□□□□ 0.52
SCARB2-216ENST00000639300 PDE4AP27815 886 aa18.31■□□□□ 0.52
SCARB2-216ENST00000639300 CCDC184Q52MB2 194 aa18.3■□□□□ 0.52
SCARB2-216ENST00000639300 ELL2O00472 640 aaPredicted RBP18.3■□□□□ 0.52
SCARB2-216ENST00000639300 PAK3O75914 559 aaPredicted RBP18.3■□□□□ 0.52
SCARB2-216ENST00000639300 CNTLNQ9NXG0 1405 aa18.3■□□□□ 0.52
SCARB2-216ENST00000639300 SLC4A3P48751 1232 aa18.29■□□□□ 0.52
SCARB2-216ENST00000639300 AFAP1Q8N556 730 aa18.29■□□□□ 0.52
SCARB2-216ENST00000639300 POLA1P09884 1462 aaPredicted RBP18.29■□□□□ 0.52
SCARB2-216ENST00000639300 NBPF1Q3BBV0 1214 aa18.28■□□□□ 0.52
SCARB2-216ENST00000639300 COG6Q9Y2V7 657 aa18.28■□□□□ 0.52
SCARB2-216ENST00000639300 MFAP1P55081 439 aaKnown RBP18.28■□□□□ 0.52
SCARB2-216ENST00000639300 DNAJC5BQ9UF47 199 aa18.27■□□□□ 0.52
SCARB2-216ENST00000639300 PMFBP1Q8TBY8 1022 aa18.27■□□□□ 0.52
SCARB2-216ENST00000639300 PTMAP06454 111 aaKnown RBP18.27■□□□□ 0.51
SCARB2-216ENST00000639300 GZF1Q9H116 711 aaPredicted RBP18.26■□□□□ 0.51
SCARB2-216ENST00000639300 KCNJ4P48050 445 aa18.26■□□□□ 0.51
SCARB2-216ENST00000639300 TOPBP1Q92547 1522 aa18.26■□□□□ 0.51
SCARB2-216ENST00000639300 MINK1Q8N4C8 1332 aaPredicted RBP18.25■□□□□ 0.51
SCARB2-216ENST00000639300 TAOK2Q9UL54 1235 aa18.25■□□□□ 0.51
SCARB2-216ENST00000639300 VGFO15240 615 aaPredicted RBP18.24■□□□□ 0.51
SCARB2-216ENST00000639300 PLCB2Q00722 1185 aa18.24■□□□□ 0.51
SCARB2-216ENST00000639300 CDCA7LQ96GN5 454 aa18.24■□□□□ 0.51
SCARB2-216ENST00000639300 CALD1Q05682 793 aaKnown RBP18.24■□□□□ 0.51
SCARB2-216ENST00000639300 PRDM2Q13029 1718 aa18.23■□□□□ 0.51
SCARB2-216ENST00000639300 GRIN2BQ13224 1484 aa18.23■□□□□ 0.51
SCARB2-216ENST00000639300 CYB5RLQ6IPT4 315 aa18.23■□□□□ 0.51
SCARB2-216ENST00000639300 HFM1A2PYH4 1435 aa18.23■□□□□ 0.51
SCARB2-216ENST00000639300 TIAM1Q13009 1591 aa18.22■□□□□ 0.51
SCARB2-216ENST00000639300 E9PSI1 815 aa18.22■□□□□ 0.51
SCARB2-216ENST00000639300 PRG4Q92954 1404 aaPredicted RBP18.22■□□□□ 0.51
SCARB2-216ENST00000639300 WDR97A6NE52 1622 aa18.21■□□□□ 0.51
SCARB2-216ENST00000639300 CENPQQ7L2Z9 268 aaPredicted RBP18.21■□□□□ 0.51
SCARB2-216ENST00000639300 ADAMTS8Q9UP79 889 aa18.21■□□□□ 0.51
SCARB2-216ENST00000639300 CGNL1Q0VF96 1302 aa18.21■□□□□ 0.51
SCARB2-216ENST00000639300 TMEM132EQ6IEE7 984 aa18.2■□□□□ 0.5
SCARB2-216ENST00000639300 SLC4A10Q6U841 1118 aa18.2■□□□□ 0.5
SCARB2-216ENST00000639300 FGD1P98174 961 aa18.19■□□□□ 0.5
SCARB2-216ENST00000639300 CFAP70Q5T0N1 1121 aa18.19■□□□□ 0.5
SCARB2-216ENST00000639300 EVC2Q86UK5 1308 aa18.19■□□□□ 0.5
SCARB2-216ENST00000639300 GLIPR1L2Q4G1C9 344 aa18.19■□□□□ 0.5
SCARB2-216ENST00000639300 NGDNQ8NEJ9 315 aaKnown RBP18.18■□□□□ 0.5
SCARB2-216ENST00000639300 LTV1Q96GA3 475 aaPredicted RBP18.18■□□□□ 0.5
SCARB2-216ENST00000639300 NAP1L5Q96NT1 182 aaPredicted RBP18.18■□□□□ 0.5
SCARB2-216ENST00000639300 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
SCARB2-216ENST00000639300 BICRAQ9NZM4 1560 aa18.17■□□□□ 0.5
SCARB2-216ENST00000639300 NAIPQ13075 1403 aa18.16■□□□□ 0.5
SCARB2-216ENST00000639300 FAM161AQ3B820 660 aa18.16■□□□□ 0.5
SCARB2-216ENST00000639300 DNTTIP2Q5QJE6 756 aaKnown RBP18.16■□□□□ 0.5
SCARB2-216ENST00000639300 FANCIQ9NVI1 1328 aa18.16■□□□□ 0.5
SCARB2-216ENST00000639300 NAP1L2Q9ULW6 460 aaPredicted RBP18.15■□□□□ 0.5
SCARB2-216ENST00000639300 FOXD4L1Q9NU39 408 aa18.15■□□□□ 0.5
SCARB2-216ENST00000639300 STK31Q9BXU1 1019 aa18.15■□□□□ 0.5
SCARB2-216ENST00000639300 C11orf95C9JLR9 678 aaPredicted RBP18.14■□□□□ 0.49
SCARB2-216ENST00000639300 ZKSCAN2Q63HK3 967 aa18.14■□□□□ 0.49
SCARB2-216ENST00000639300 EFCAB5A4FU69 1503 aa18.14■□□□□ 0.49
SCARB2-216ENST00000639300 AMPHP49418 695 aa18.13■□□□□ 0.49
SCARB2-216ENST00000639300 PNISRQ8TF01 805 aaKnown RBP18.13■□□□□ 0.49
SCARB2-216ENST00000639300 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
SCARB2-216ENST00000639300 MIA2Q96PC5 1412 aa18.12■□□□□ 0.49
SCARB2-216ENST00000639300 MCCP23508 829 aa18.11■□□□□ 0.49
SCARB2-216ENST00000639300 OSCARQ8IYS5 282 aa18.11■□□□□ 0.49
SCARB2-216ENST00000639300 GGNBP2Q9H3C7 697 aa18.11■□□□□ 0.49
SCARB2-216ENST00000639300 ZRSR1Q15695 479 aaKnown RBP18.11■□□□□ 0.49
SCARB2-216ENST00000639300 BRD4O60885 1362 aaPredicted RBP18.11■□□□□ 0.49
SCARB2-216ENST00000639300 L1TD1Q5T7N2 865 aaKnown RBP18.1■□□□□ 0.49
SCARB2-216ENST00000639300 KIAA1107Q9UPP5 1409 aa18.1■□□□□ 0.49
SCARB2-216ENST00000639300 TROQ12816 1431 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-216ENST00000639300 EID1Q9Y6B2 187 aa18.09■□□□□ 0.49
SCARB2-216ENST00000639300 ANKRD45Q5TZF3 282 aa18.09■□□□□ 0.49
SCARB2-216ENST00000639300 RIPK4P57078 832 aa18.08■□□□□ 0.49
SCARB2-216ENST00000639300 PANK1Q8TE04 598 aa18.08■□□□□ 0.49
SCARB2-216ENST00000639300 CABP2Q9NPB3 220 aa18.08■□□□□ 0.49
SCARB2-216ENST00000639300 LMOD3Q0VAK6 560 aa18.08■□□□□ 0.48
SCARB2-216ENST00000639300 AKNAQ7Z591 1439 aa18.08■□□□□ 0.48
SCARB2-216ENST00000639300 MTHFSP49914 203 aa18.08■□□□□ 0.48
SCARB2-216ENST00000639300 C9orf84Q5VXU9 1444 aa18.08■□□□□ 0.48
SCARB2-216ENST00000639300 CDK13Q14004 1512 aaKnown RBP18.07■□□□□ 0.48
SCARB2-216ENST00000639300 COG3Q96JB2 828 aa18.07■□□□□ 0.48
SCARB2-216ENST00000639300 GBP4Q96PP9 640 aa18.07■□□□□ 0.48
SCARB2-216ENST00000639300 DIAPH1O60610 1272 aaKnown RBP18.07■□□□□ 0.48
SCARB2-216ENST00000639300 PPP2R1AP30153 589 aa18.07■□□□□ 0.48
SCARB2-216ENST00000639300 TRIM6-TRIM34B2RNG4 842 aa18.07■□□□□ 0.48
SCARB2-216ENST00000639300 KIAA1211Q6ZU35 1233 aa18.07■□□□□ 0.48
SCARB2-216ENST00000639300 EHBP1L1Q8N3D4 1523 aa18.07■□□□□ 0.48
SCARB2-216ENST00000639300 RUNDC1Q96C34 613 aa18.06■□□□□ 0.48
SCARB2-216ENST00000639300 CSB-PGBD3P0DP91 1061 aa18.06■□□□□ 0.48
SCARB2-216ENST00000639300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.06■□□□□ 0.48
SCARB2-216ENST00000639300 GOLGA6L4A6NEF3 574 aa18.05■□□□□ 0.48
SCARB2-216ENST00000639300 CFAP44Q96MT7 982 aa18.05■□□□□ 0.48
SCARB2-216ENST00000639300 NOL8Q76FK4 1167 aaKnown RBP18.05■□□□□ 0.48
SCARB2-216ENST00000639300 STAC3Q96MF2 364 aa18.05■□□□□ 0.48
SCARB2-216ENST00000639300 ZNF330Q9Y3S2 320 aaPredicted RBP18.05■□□□□ 0.48
SCARB2-216ENST00000639300 DAPK1P53355 1430 aa18.05■□□□□ 0.48
SCARB2-216ENST00000639300 HMMRO75330 724 aa18.05■□□□□ 0.48
SCARB2-216ENST00000639300 SLC12A5Q9H2X9 1139 aa18.05■□□□□ 0.48
SCARB2-216ENST00000639300 DZIP1LQ8IYY4 767 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms