RNA–Protein interactions for RNA: ENST00000638716.1

HNRNPU-216, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5 BASIC

Gene HNRNPU, Length 2,640 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-216ENST00000638716 RIMBP3CA6NJZ7 1639 aa12.92□□□□□ -0.34
HNRNPU-216ENST00000638716 RIMBP3BA6NNM3 1639 aa12.92□□□□□ -0.34
HNRNPU-216ENST00000638716 RIMBP3Q9UFD9 1639 aa12.92□□□□□ -0.34
HNRNPU-216ENST00000638716 ST20-MTHFSA0A0A6YYL1 179 aa12.92□□□□□ -0.34
HNRNPU-216ENST00000638716 TMC1Q8TDI8 760 aa12.92□□□□□ -0.34
HNRNPU-216ENST00000638716 DCAF11Q8TEB1 546 aa12.92□□□□□ -0.34
HNRNPU-216ENST00000638716 SAMD9LQ8IVG5 1584 aa12.91□□□□□ -0.34
HNRNPU-216ENST00000638716 PREX2Q70Z35 1606 aa12.91□□□□□ -0.34
HNRNPU-216ENST00000638716 TRPM1Q7Z4N2 1603 aa12.9□□□□□ -0.34
HNRNPU-216ENST00000638716 ERICH6Q7L0X2 663 aa12.9□□□□□ -0.34
HNRNPU-216ENST00000638716 SENP3-EIF4A1A0A087X0R7 540 aa12.9□□□□□ -0.35
HNRNPU-216ENST00000638716 FAM135AQ9P2D6 1515 aa12.89□□□□□ -0.35
HNRNPU-216ENST00000638716 LRPPRCP42704 1394 aaKnown RBP12.88□□□□□ -0.35
HNRNPU-216ENST00000638716 CCDC141Q6ZP82 1450 aa12.88□□□□□ -0.35
HNRNPU-216ENST00000638716 MYBBP1AQ9BQG0 1328 aaKnown RBP12.88□□□□□ -0.35
HNRNPU-216ENST00000638716 MYO5CQ9NQX4 1742 aa12.87□□□□□ -0.35
HNRNPU-216ENST00000638716 BRD4O60885 1362 aaPredicted RBP12.87□□□□□ -0.35
HNRNPU-216ENST00000638716 KTN1Q86UP2 1357 aaKnown RBP12.87□□□□□ -0.35
HNRNPU-216ENST00000638716 RALBP1Q15311 655 aa12.87□□□□□ -0.35
HNRNPU-216ENST00000638716 CCDC136Q96JN2 1154 aa12.86□□□□□ -0.35
HNRNPU-216ENST00000638716 PRAG1Q86YV5 1406 aa12.85□□□□□ -0.35
HNRNPU-216ENST00000638716 UNC13BO14795 1591 aa12.85□□□□□ -0.35
HNRNPU-216ENST00000638716 CCDC144AA2RUR9 1427 aa12.84□□□□□ -0.35
HNRNPU-216ENST00000638716 RSPH4AQ5TD94 716 aa12.84□□□□□ -0.35
HNRNPU-216ENST00000638716 MAST1Q9Y2H9 1570 aa12.83□□□□□ -0.36
HNRNPU-216ENST00000638716 SYCP2Q9BX26 1530 aa12.83□□□□□ -0.36
HNRNPU-216ENST00000638716 LAMC1P11047 1609 aa12.82□□□□□ -0.36
HNRNPU-216ENST00000638716 TTC37Q6PGP7 1564 aa12.81□□□□□ -0.36
HNRNPU-216ENST00000638716 IQGAP3Q86VI3 1631 aa12.81□□□□□ -0.36
HNRNPU-216ENST00000638716 RGL3Q3MIN7 710 aa12.81□□□□□ -0.36
HNRNPU-216ENST00000638716 CHD1O14646 1710 aa12.81□□□□□ -0.36
HNRNPU-216ENST00000638716 PLA2R1Q13018 1463 aa12.81□□□□□ -0.36
HNRNPU-216ENST00000638716 PARD3Q8TEW0 1356 aa12.8□□□□□ -0.36
HNRNPU-216ENST00000638716 NBPF1Q3BBV0 1214 aa12.8□□□□□ -0.36
HNRNPU-216ENST00000638716 A2MP01023 1474 aa12.8□□□□□ -0.36
HNRNPU-216ENST00000638716 ARHGAP5Q13017 1502 aa12.8□□□□□ -0.36
HNRNPU-216ENST00000638716 PRDM15P57071 1507 aaPredicted RBP12.8□□□□□ -0.36
HNRNPU-216ENST00000638716 NLRP13Q86W25 1043 aa12.79□□□□□ -0.36
HNRNPU-216ENST00000638716 BCL11AQ9H165 835 aa12.79□□□□□ -0.36
HNRNPU-216ENST00000638716 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.79□□□□□ -0.36
HNRNPU-216ENST00000638716 PER1O15534 1290 aaPredicted RBP12.79□□□□□ -0.36
HNRNPU-216ENST00000638716 PLXNC1O60486 1568 aa12.79□□□□□ -0.36
HNRNPU-216ENST00000638716 GPRASP1Q5JY77 1395 aa12.79□□□□□ -0.36
HNRNPU-216ENST00000638716 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.78□□□□□ -0.362e-14■■□□□ 13.7
HNRNPU-216ENST00000638716 COL17A1Q9UMD9 1497 aaPredicted RBP12.78□□□□□ -0.36
HNRNPU-216ENST00000638716 EIF2AK4Q9P2K8 1649 aaKnown RBP12.77□□□□□ -0.36
HNRNPU-216ENST00000638716 RRP1P56182 461 aaKnown RBP12.77□□□□□ -0.37
HNRNPU-216ENST00000638716 NOP58Q9Y2X3 529 aaKnown RBP12.76□□□□□ -0.37
HNRNPU-216ENST00000638716 SALL2Q9Y467 1007 aaPredicted RBP12.76□□□□□ -0.37
HNRNPU-216ENST00000638716 PLEKHH2Q8IVE3 1493 aa12.76□□□□□ -0.37
HNRNPU-216ENST00000638716 RCAN3Q9UKA8 241 aa12.75□□□□□ -0.37
HNRNPU-216ENST00000638716 DISP3Q9P2K9 1392 aa12.75□□□□□ -0.37
HNRNPU-216ENST00000638716 TESK2Q96S53 571 aa12.75□□□□□ -0.37
HNRNPU-216ENST00000638716 SHROOM2Q13796 1616 aa12.75□□□□□ -0.37
HNRNPU-216ENST00000638716 PDE3BQ13370 1112 aa12.75□□□□□ -0.37
HNRNPU-216ENST00000638716 DUOX2Q9NRD8 1548 aa12.74□□□□□ -0.37
HNRNPU-216ENST00000638716 WASHC2CQ9Y4E1 1318 aa12.74□□□□□ -0.37
HNRNPU-216ENST00000638716 EXOC6Q8TAG9 804 aa12.74□□□□□ -0.37
HNRNPU-216ENST00000638716 ERBINQ96RT1 1412 aa12.73□□□□□ -0.37
HNRNPU-216ENST00000638716 PAK3O75914 559 aaPredicted RBP12.73□□□□□ -0.37
HNRNPU-216ENST00000638716 CC2D1BQ5T0F9 858 aaKnown RBP12.73□□□□□ -0.37
HNRNPU-216ENST00000638716 RNF17Q9BXT8 1623 aaKnown RBP12.73□□□□□ -0.37
HNRNPU-216ENST00000638716 ATP10AO60312 1499 aa12.73□□□□□ -0.37
HNRNPU-216ENST00000638716 MAGI2Q86UL8 1455 aa12.73□□□□□ -0.37
HNRNPU-216ENST00000638716 PANK3Q9H999 370 aa12.72□□□□□ -0.37
HNRNPU-216ENST00000638716 ANP32AP39687 249 aaKnown RBP12.72□□□□□ -0.37
HNRNPU-216ENST00000638716 CDCA7LQ96GN5 454 aa12.71□□□□□ -0.37
HNRNPU-216ENST00000638716 MYT1LQ9UL68 1186 aa12.71□□□□□ -0.37
HNRNPU-216ENST00000638716 BLMP54132 1417 aaPredicted RBP12.71□□□□□ -0.38
HNRNPU-216ENST00000638716 ABCC2Q92887 1545 aa12.71□□□□□ -0.38
HNRNPU-216ENST00000638716 IPO9Q96P70 1041 aaKnown RBP12.71□□□□□ -0.38
HNRNPU-216ENST00000638716 ZMYM4Q5VZL5 1548 aa12.7□□□□□ -0.38
HNRNPU-216ENST00000638716 TMF1P82094 1093 aa12.7□□□□□ -0.38
HNRNPU-216ENST00000638716 ERCC6L2Q5T890 1561 aa12.7□□□□□ -0.38
HNRNPU-216ENST00000638716 INSRP06213 1382 aa12.7□□□□□ -0.38
HNRNPU-216ENST00000638716 IQGAP1P46940 1657 aa12.69□□□□□ -0.38
HNRNPU-216ENST00000638716 PRKCSHP14314 528 aaPredicted RBP12.69□□□□□ -0.38
HNRNPU-216ENST00000638716 CEP152O94986 1710 aa12.68□□□□□ -0.38
HNRNPU-216ENST00000638716 MADDQ8WXG6 1647 aa12.67□□□□□ -0.38
HNRNPU-216ENST00000638716 SPHKAPQ2M3C7 1700 aa12.67□□□□□ -0.38
HNRNPU-216ENST00000638716 ZCCHC11Q5TAX3 1644 aaKnown RBP12.67□□□□□ -0.38
HNRNPU-216ENST00000638716 DAXXQ9UER7 740 aaPredicted RBP12.67□□□□□ -0.38
HNRNPU-216ENST00000638716 TCERG1O14776 1098 aaKnown RBP12.66□□□□□ -0.38
HNRNPU-216ENST00000638716 PLCH2O75038 1416 aa12.66□□□□□ -0.38
HNRNPU-216ENST00000638716 NBR1Q14596 966 aa12.66□□□□□ -0.38
HNRNPU-216ENST00000638716 ZBTB47Q9UFB7 747 aaPredicted RBP12.66□□□□□ -0.38
HNRNPU-216ENST00000638716 ABCC1P33527 1531 aa12.65□□□□□ -0.38
HNRNPU-216ENST00000638716 PLIN1O60240 522 aa12.64□□□□□ -0.39
HNRNPU-216ENST00000638716 DEKP35659 375 aaKnown RBP12.64□□□□□ -0.39
HNRNPU-216ENST00000638716 WDR7Q9Y4E6 1490 aa12.64□□□□□ -0.39
HNRNPU-216ENST00000638716 EFCAB2Q5VUJ9 269 aa12.63□□□□□ -0.39
HNRNPU-216ENST00000638716 TRAPPC8Q9Y2L5 1435 aa12.63□□□□□ -0.39
HNRNPU-216ENST00000638716 PDE4AP27815 886 aa12.62□□□□□ -0.39
HNRNPU-216ENST00000638716 ADAMTS8Q9UP79 889 aa12.62□□□□□ -0.39
HNRNPU-216ENST00000638716 CYB5RLQ6IPT4 315 aa12.62□□□□□ -0.39
HNRNPU-216ENST00000638716 TRPM2O94759 1503 aa12.62□□□□□ -0.39
HNRNPU-216ENST00000638716 CLTCL1P53675 1640 aa12.61□□□□□ -0.39
HNRNPU-216ENST00000638716 CRBNQ96SW2 442 aa12.61□□□□□ -0.39
HNRNPU-216ENST00000638716 SYNMO15061 1565 aa12.61□□□□□ -0.39
HNRNPU-216ENST00000638716 MYOM1P52179 1685 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms