RNA–Protein interactions for RNA: ENST00000638175.1

SCARB2-206, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-206ENST00000638175 WRNQ14191 1432 aaPredicted RBP eCLIP10.73□□□□□ -0.69
SCARB2-206ENST00000638175 FGD5Q6ZNL6 1462 aa10.73□□□□□ -0.69
SCARB2-206ENST00000638175 EIF4G3O43432 1585 aaKnown RBP10.71□□□□□ -0.69
SCARB2-206ENST00000638175 LHX6Q9UPM6 363 aa10.71□□□□□ -0.69
SCARB2-206ENST00000638175 GPHNQ9NQX3 736 aaPredicted RBP10.7□□□□□ -0.7
SCARB2-206ENST00000638175 FOXK1P85037 733 aa10.69□□□□□ -0.7
SCARB2-206ENST00000638175 P3H3Q8IVL6 736 aa10.69□□□□□ -0.7
SCARB2-206ENST00000638175 PLPP6Q8IY26 295 aa10.69□□□□□ -0.7
SCARB2-206ENST00000638175 DSG2Q14126 1118 aa10.68□□□□□ -0.7
SCARB2-206ENST00000638175 PBRM1Q86U86 1689 aa10.68□□□□□ -0.7
SCARB2-206ENST00000638175 KDM4FA0A1W2PPD8 638 aa10.67□□□□□ -0.7
SCARB2-206ENST00000638175 ABCA5Q8WWZ7 1642 aa10.66□□□□□ -0.7
SCARB2-206ENST00000638175 NBR1Q14596 966 aa10.66□□□□□ -0.7
SCARB2-206ENST00000638175 POTEEQ6S8J3 1075 aa10.66□□□□□ -0.7
SCARB2-206ENST00000638175 PTCD2Q8WV60 388 aaKnown RBP10.66□□□□□ -0.7
SCARB2-206ENST00000638175 WDR70Q9NW82 654 aa10.66□□□□□ -0.7
SCARB2-206ENST00000638175 NCKAP5LQ9HCH0 1330 aa10.65□□□□□ -0.7
SCARB2-206ENST00000638175 ABCA10Q8WWZ4 1543 aa10.65□□□□□ -0.7
SCARB2-206ENST00000638175 ANKRD13DQ6ZTN6 518 aa10.65□□□□□ -0.7
SCARB2-206ENST00000638175 CRISPLD2Q9H0B8 497 aa10.65□□□□□ -0.7
SCARB2-206ENST00000638175 SOGA1O94964 1423 aa10.65□□□□□ -0.7
SCARB2-206ENST00000638175 MFSD10Q14728 455 aa10.64□□□□□ -0.71
SCARB2-206ENST00000638175 KCNV2Q8TDN2 545 aa10.64□□□□□ -0.71
SCARB2-206ENST00000638175 ZNF608Q9ULD9 1512 aaPredicted RBP10.63□□□□□ -0.71
SCARB2-206ENST00000638175 RAD54L2Q9Y4B4 1467 aa10.63□□□□□ -0.71
SCARB2-206ENST00000638175 LSM11P83369 360 aaKnown RBP eCLIP10.63□□□□□ -0.71
SCARB2-206ENST00000638175 MYT1LQ9UL68 1186 aa10.63□□□□□ -0.71
SCARB2-206ENST00000638175 AXIN2Q9Y2T1 843 aa10.63□□□□□ -0.71
SCARB2-206ENST00000638175 RNF166Q96A37 237 aaPredicted RBP10.62□□□□□ -0.71
SCARB2-206ENST00000638175 PDE4AP27815 886 aa10.61□□□□□ -0.71
SCARB2-206ENST00000638175 CHD1O14646 1710 aa10.61□□□□□ -0.71
SCARB2-206ENST00000638175 PBX2P40425 430 aa10.58□□□□□ -0.72
SCARB2-206ENST00000638175 GAPVD1Q14C86 1478 aa10.57□□□□□ -0.72
SCARB2-206ENST00000638175 E2F4Q16254 413 aa10.57□□□□□ -0.72
SCARB2-206ENST00000638175 AQRO60306 1485 aaKnown RBP eCLIP10.56□□□□□ -0.72
SCARB2-206ENST00000638175 GRIN2BQ13224 1484 aa10.56□□□□□ -0.72
SCARB2-206ENST00000638175 MAGI1Q96QZ7 1491 aaPredicted RBP10.56□□□□□ -0.72
SCARB2-206ENST00000638175 LARP6Q9BRS8 491 aaKnown RBP10.56□□□□□ -0.72
SCARB2-206ENST00000638175 ERICH3Q5RHP9 1530 aa10.55□□□□□ -0.72
SCARB2-206ENST00000638175 ARHGEF1Q92888 912 aaKnown RBP10.55□□□□□ -0.72
SCARB2-206ENST00000638175 CUL7Q14999 1698 aa10.54□□□□□ -0.72
SCARB2-206ENST00000638175 PTGER2P43116 358 aa10.54□□□□□ -0.72
SCARB2-206ENST00000638175 ADAMTS12P58397 1594 aa10.54□□□□□ -0.72
SCARB2-206ENST00000638175 OXER1Q8TDS5 423 aa10.54□□□□□ -0.72
SCARB2-206ENST00000638175 UPF1Q92900 1129 aaKnown RBP eCLIP10.54□□□□□ -0.72
SCARB2-206ENST00000638175 DDX27Q96GQ7 796 aaKnown RBP10.54□□□□□ -0.72
SCARB2-206ENST00000638175 TDRD9Q8NDG6 1382 aaKnown RBP10.53□□□□□ -0.72
SCARB2-206ENST00000638175 PSDA5PKW4 1024 aaPredicted RBP10.53□□□□□ -0.72
SCARB2-206ENST00000638175 TBC1D12O60347 775 aa10.53□□□□□ -0.72
SCARB2-206ENST00000638175 CAMK2BQ13554 666 aa10.53□□□□□ -0.72
SCARB2-206ENST00000638175 PPP1R15BQ5SWA1 713 aa10.53□□□□□ -0.72
SCARB2-206ENST00000638175 ARIH1Q9Y4X5 557 aaPredicted RBP10.53□□□□□ -0.72
SCARB2-206ENST00000638175 SNAPC4Q5SXM2 1469 aa10.53□□□□□ -0.72
SCARB2-206ENST00000638175 ARHGAP33O14559 1287 aa10.52□□□□□ -0.73
SCARB2-206ENST00000638175 KIF27Q86VH2 1401 aa10.5□□□□□ -0.73
SCARB2-206ENST00000638175 PSEN2P49810 448 aa10.5□□□□□ -0.73
SCARB2-206ENST00000638175 SYNJ2O15056 1496 aa10.49□□□□□ -0.73
SCARB2-206ENST00000638175 PRKCSHP14314 528 aaPredicted RBP10.49□□□□□ -0.73
SCARB2-206ENST00000638175 TPRNQ4KMQ1 711 aa10.49□□□□□ -0.73
SCARB2-206ENST00000638175 DMRTA1Q5VZB9 504 aa10.49□□□□□ -0.73
SCARB2-206ENST00000638175 PPP4R3BQ5MIZ7 849 aa10.48□□□□□ -0.73
SCARB2-206ENST00000638175 ADGRD1Q6QNK2 874 aa10.47□□□□□ -0.73
SCARB2-206ENST00000638175 FHAD1B1AJZ9 1412 aa10.45□□□□□ -0.74
SCARB2-206ENST00000638175 GRIN2AQ12879 1464 aa10.44□□□□□ -0.74
SCARB2-206ENST00000638175 CLASP1Q7Z460 1538 aa10.43□□□□□ -0.74
SCARB2-206ENST00000638175 TK2O00142 265 aa10.42□□□□□ -0.74
SCARB2-206ENST00000638175 ZNF454Q8N9F8 522 aa10.42□□□□□ -0.74
SCARB2-206ENST00000638175 KCNK17Q96T54 332 aa10.42□□□□□ -0.74
SCARB2-206ENST00000638175 EEA1Q15075 1411 aa10.41□□□□□ -0.74
SCARB2-206ENST00000638175 HRO43593 1189 aa10.41□□□□□ -0.74
SCARB2-206ENST00000638175 ANO8Q9HCE9 1232 aaPredicted RBP10.41□□□□□ -0.74
SCARB2-206ENST00000638175 CTTNBP2Q8WZ74 1663 aa10.41□□□□□ -0.74
SCARB2-206ENST00000638175 CEP170Q5SW79 1584 aa10.4□□□□□ -0.74
SCARB2-206ENST00000638175 TESPA1A2RU30 521 aaPredicted RBP10.4□□□□□ -0.74
SCARB2-206ENST00000638175 RUSC2Q8N2Y8 1516 aa10.39□□□□□ -0.75
SCARB2-206ENST00000638175 EVI5O60447 810 aa10.39□□□□□ -0.75
SCARB2-206ENST00000638175 FOSBP53539 338 aa10.39□□□□□ -0.75
SCARB2-206ENST00000638175 EMILIN3Q9NT22 766 aa10.39□□□□□ -0.75
SCARB2-206ENST00000638175 IGF1RP08069 1367 aa10.39□□□□□ -0.75
SCARB2-206ENST00000638175 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.38□□□□□ -0.75
SCARB2-206ENST00000638175 CHMP7Q8WUX9 453 aaPredicted RBP10.38□□□□□ -0.75
SCARB2-206ENST00000638175 NUP160Q12769 1436 aa10.38□□□□□ -0.75
SCARB2-206ENST00000638175 SHROOM2Q13796 1616 aa10.37□□□□□ -0.75
SCARB2-206ENST00000638175 BCL2L12Q9HB09 334 aa10.37□□□□□ -0.75
SCARB2-206ENST00000638175 SEMA3EO15041 775 aa10.36□□□□□ -0.75
SCARB2-206ENST00000638175 MAP3K9P80192 1104 aa10.35□□□□□ -0.75
SCARB2-206ENST00000638175 LMOD2Q6P5Q4 547 aa10.35□□□□□ -0.75
SCARB2-206ENST00000638175 VPS9D1Q9Y2B5 631 aa10.35□□□□□ -0.75
SCARB2-206ENST00000638175 KIF21BO75037 1637 aa10.35□□□□□ -0.75
SCARB2-206ENST00000638175 RIMBP3CA6NJZ7 1639 aa10.34□□□□□ -0.75
SCARB2-206ENST00000638175 RIMBP3BA6NNM3 1639 aa10.34□□□□□ -0.75
SCARB2-206ENST00000638175 RIMBP3Q9UFD9 1639 aa10.34□□□□□ -0.75
SCARB2-206ENST00000638175 CARMIL1Q5VZK9 1371 aa10.34□□□□□ -0.75
SCARB2-206ENST00000638175 RAPGEF2Q9Y4G8 1499 aa10.34□□□□□ -0.75
SCARB2-206ENST00000638175 PDIA6Q15084 440 aa10.33□□□□□ -0.76
SCARB2-206ENST00000638175 JPH4Q96JJ6 628 aa10.33□□□□□ -0.76
SCARB2-206ENST00000638175 KCNH8Q96L42 1107 aa10.33□□□□□ -0.76
SCARB2-206ENST00000638175 PRXQ9BXM0 1461 aa10.33□□□□□ -0.76
SCARB2-206ENST00000638175 TULP1O00294 542 aaPredicted RBP10.32□□□□□ -0.76
SCARB2-206ENST00000638175 ADAM33Q9BZ11 813 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms