RNA–Protein interactions for RNA: ENST00000637044.1

GABRA1-216, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 4,108 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-216ENST00000637044 PPP6R1Q9UPN7 881 aa11.38□□□□□ -0.59
GABRA1-216ENST00000637044 A2MP01023 1474 aa11.38□□□□□ -0.59
GABRA1-216ENST00000637044 TMC1Q8TDI8 760 aa11.38□□□□□ -0.59
GABRA1-216ENST00000637044 MRS2Q9HD23 443 aa11.37□□□□□ -0.59
GABRA1-216ENST00000637044 SLC52A1Q9NWF4 448 aa11.37□□□□□ -0.59
GABRA1-216ENST00000637044 HNRNPUQ00839 825 aaKnown RBP eCLIP11.37□□□□□ -0.59
GABRA1-216ENST00000637044 TSPOAP1O95153 1857 aa11.36□□□□□ -0.59
GABRA1-216ENST00000637044 THEMISQ8N1K5 641 aaPredicted RBP11.36□□□□□ -0.59
GABRA1-216ENST00000637044 HSPA5P11021 654 aaKnown RBP11.36□□□□□ -0.59
GABRA1-216ENST00000637044 SAFB2Q14151 953 aaKnown RBP eCLIP11.35□□□□□ -0.59
GABRA1-216ENST00000637044 FAM9BQ8IZU0 186 aa11.35□□□□□ -0.59
GABRA1-216ENST00000637044 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.35□□□□□ -0.59
GABRA1-216ENST00000637044 TCOF1Q13428 1488 aaKnown RBP11.34□□□□□ -0.59
GABRA1-216ENST00000637044 RTEL1-TNFRSF6BF6WH68 1400 aa11.34□□□□□ -0.59
GABRA1-216ENST00000637044 MAPKBP1O60336 1514 aa11.34□□□□□ -0.59
GABRA1-216ENST00000637044 FBXO31Q5XUX0 539 aaPredicted RBP11.34□□□□□ -0.59
GABRA1-216ENST00000637044 TTC37Q6PGP7 1564 aa11.34□□□□□ -0.59
GABRA1-216ENST00000637044 PTPRKQ15262 1439 aa11.34□□□□□ -0.59
GABRA1-216ENST00000637044 NEFMP07197 916 aa11.33□□□□□ -0.6
GABRA1-216ENST00000637044 TXNDC2Q86VQ3 553 aa11.33□□□□□ -0.6
GABRA1-216ENST00000637044 MYO5CQ9NQX4 1742 aa11.32□□□□□ -0.6
GABRA1-216ENST00000637044 ATP10AO60312 1499 aa11.32□□□□□ -0.6
GABRA1-216ENST00000637044 TMF1P82094 1093 aa11.31□□□□□ -0.6
GABRA1-216ENST00000637044 DUOX2Q9NRD8 1548 aa11.31□□□□□ -0.6
GABRA1-216ENST00000637044 CFAP74Q9C0B2 1584 aa11.3□□□□□ -0.6
GABRA1-216ENST00000637044 SCAF1Q9H7N4 1312 aaKnown RBP11.3□□□□□ -0.6
GABRA1-216ENST00000637044 ERICH6Q7L0X2 663 aa11.3□□□□□ -0.6
GABRA1-216ENST00000637044 ROCK2O75116 1388 aaKnown RBP11.3□□□□□ -0.6
GABRA1-216ENST00000637044 YEATS2Q9ULM3 1422 aa11.29□□□□□ -0.6
GABRA1-216ENST00000637044 PLEKHG5O94827 1062 aa11.29□□□□□ -0.6
GABRA1-216ENST00000637044 ANKLE2Q86XL3 938 aa11.29□□□□□ -0.6
GABRA1-216ENST00000637044 ATP7AQ04656 1500 aa11.29□□□□□ -0.6
GABRA1-216ENST00000637044 ERBINQ96RT1 1412 aa11.29□□□□□ -0.6
GABRA1-216ENST00000637044 SHANK2Q9UPX8 1470 aa11.29□□□□□ -0.6
GABRA1-216ENST00000637044 CCER2I3L3R5 266 aa11.28□□□□□ -0.6
GABRA1-216ENST00000637044 SRPK2P78362 688 aaKnown RBP11.28□□□□□ -0.6
GABRA1-216ENST00000637044 TRAK1Q9UPV9 953 aa11.28□□□□□ -0.6
GABRA1-216ENST00000637044 KNSTRNQ9Y448 316 aa11.28□□□□□ -0.6
GABRA1-216ENST00000637044 STAC3Q96MF2 364 aa11.28□□□□□ -0.6
GABRA1-216ENST00000637044 MBD5Q9P267 1494 aa11.28□□□□□ -0.6
GABRA1-216ENST00000637044 IDI1Q13907 227 aa11.28□□□□□ -0.6
GABRA1-216ENST00000637044 ZFYVE16Q7Z3T8 1539 aa11.27□□□□□ -0.6
GABRA1-216ENST00000637044 WDR43Q15061 677 aaKnown RBP eCLIP11.27□□□□□ -0.61
GABRA1-216ENST00000637044 LMOD2Q6P5Q4 547 aa11.26□□□□□ -0.61
GABRA1-216ENST00000637044 MAGI2Q86UL8 1455 aa11.25□□□□□ -0.61
GABRA1-216ENST00000637044 PREX2Q70Z35 1606 aa11.25□□□□□ -0.61
GABRA1-216ENST00000637044 SAMD9LQ8IVG5 1584 aa11.25□□□□□ -0.61
GABRA1-216ENST00000637044 ABCC1P33527 1531 aa11.25□□□□□ -0.61
GABRA1-216ENST00000637044 KDM6BO15054 1643 aa11.25□□□□□ -0.61
GABRA1-216ENST00000637044 DNMT1P26358 1616 aaKnown RBP11.25□□□□□ -0.61
GABRA1-216ENST00000637044 ARAP3Q8WWN8 1544 aa11.24□□□□□ -0.61
GABRA1-216ENST00000637044 TNRQ92752 1358 aa11.24□□□□□ -0.61
GABRA1-216ENST00000637044 ABCA9Q8IUA7 1624 aa11.24□□□□□ -0.61
GABRA1-216ENST00000637044 MLH3Q9UHC1 1453 aa11.24□□□□□ -0.61
GABRA1-216ENST00000637044 HAP1P54257 671 aaPredicted RBP11.24□□□□□ -0.61
GABRA1-216ENST00000637044 ZMYM3Q14202 1370 aa11.24□□□□□ -0.61
GABRA1-216ENST00000637044 EIF3AQ14152 1382 aaKnown RBP11.24□□□□□ -0.61
GABRA1-216ENST00000637044 SLC26A8Q96RN1 970 aa11.23□□□□□ -0.61
GABRA1-216ENST00000637044 ARHGEF12Q9NZN5 1544 aa11.22□□□□□ -0.61
GABRA1-216ENST00000637044 ARHGEF5Q12774 1597 aa11.22□□□□□ -0.61
GABRA1-216ENST00000637044 CNTLNQ9NXG0 1405 aa11.22□□□□□ -0.61
GABRA1-216ENST00000637044 TMEM132EQ6IEE7 984 aa11.21□□□□□ -0.61
GABRA1-216ENST00000637044 RPGRIP1LQ68CZ1 1315 aa11.21□□□□□ -0.61
GABRA1-216ENST00000637044 NUTM2FA1L443 756 aa11.21□□□□□ -0.61
GABRA1-216ENST00000637044 CFAP70Q5T0N1 1121 aa11.21□□□□□ -0.61
GABRA1-216ENST00000637044 DIP2BQ9P265 1576 aa11.21□□□□□ -0.61
GABRA1-216ENST00000637044 ADGRL2O95490 1459 aa11.21□□□□□ -0.62
GABRA1-216ENST00000637044 ZBTB7CA1YPR0 619 aa11.2□□□□□ -0.62
GABRA1-216ENST00000637044 CDC42BPAQ5VT25 1732 aa11.19□□□□□ -0.62
GABRA1-216ENST00000637044 USP47Q96K76 1375 aa11.19□□□□□ -0.62
GABRA1-216ENST00000637044 FKBP8Q14318 412 aa11.19□□□□□ -0.62
GABRA1-216ENST00000637044 ANKRD30BQ9BXX2 1392 aa11.19□□□□□ -0.62
GABRA1-216ENST00000637044 GLI2P10070 1586 aa11.18□□□□□ -0.62
GABRA1-216ENST00000637044 CANXP27824 592 aaKnown RBP11.18□□□□□ -0.62
GABRA1-216ENST00000637044 PROSER2Q86WR7 435 aaPredicted RBP11.18□□□□□ -0.62
GABRA1-216ENST00000637044 CFAP53Q96M91 514 aa11.18□□□□□ -0.62
GABRA1-216ENST00000637044 MINK1Q8N4C8 1332 aaPredicted RBP11.17□□□□□ -0.62
GABRA1-216ENST00000637044 HSPA2P54652 639 aa11.17□□□□□ -0.62
GABRA1-216ENST00000637044 ST20-MTHFSA0A0A6YYL1 179 aa11.17□□□□□ -0.62
GABRA1-216ENST00000637044 HECW2Q9P2P5 1572 aa11.17□□□□□ -0.62
GABRA1-216ENST00000637044 SALL2Q9Y467 1007 aaPredicted RBP11.16□□□□□ -0.62
GABRA1-216ENST00000637044 KTN1Q86UP2 1357 aaKnown RBP11.16□□□□□ -0.62
GABRA1-216ENST00000637044 RALBP1Q15311 655 aa11.16□□□□□ -0.62
GABRA1-216ENST00000637044 DMRT2Q9Y5R5 561 aa11.16□□□□□ -0.62
GABRA1-216ENST00000637044 FAM135AQ9P2D6 1515 aa11.15□□□□□ -0.62
GABRA1-216ENST00000637044 HDGFL2Q7Z4V5 671 aaPredicted RBP11.15□□□□□ -0.62
GABRA1-216ENST00000637044 NGDNQ8NEJ9 315 aaKnown RBP11.15□□□□□ -0.62
GABRA1-216ENST00000637044 PAK3O75914 559 aaPredicted RBP11.15□□□□□ -0.62
GABRA1-216ENST00000637044 ATF3P18847 181 aa11.14□□□□□ -0.63
GABRA1-216ENST00000637044 CC2D1BQ5T0F9 858 aaKnown RBP11.14□□□□□ -0.63
GABRA1-216ENST00000637044 CENPJQ9HC77 1338 aaPredicted RBP11.13□□□□□ -0.63
GABRA1-216ENST00000637044 CDC42BPBQ9Y5S2 1711 aa11.13□□□□□ -0.63
GABRA1-216ENST00000637044 NBPF1Q3BBV0 1214 aa11.13□□□□□ -0.63
GABRA1-216ENST00000637044 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.13□□□□□ -0.63
GABRA1-216ENST00000637044 LRRIQ1Q96JM4 1722 aa11.13□□□□□ -0.63
GABRA1-216ENST00000637044 EVC2Q86UK5 1308 aa11.12□□□□□ -0.63
GABRA1-216ENST00000637044 PPM1GO15355 546 aaPredicted RBP11.12□□□□□ -0.63
GABRA1-216ENST00000637044 UHRF1BP1Q6BDS2 1440 aa11.11□□□□□ -0.63
GABRA1-216ENST00000637044 SOX12O15370 315 aa11.11□□□□□ -0.63
GABRA1-216ENST00000637044 TERF2IPQ9NYB0 399 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms