RNA–Protein interactions for RNA: ENST00000636340.1

GABRA1-213, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-213ENST00000636340 TCOF1Q13428 1488 aaKnown RBP8.75□□□□□ -1.01
GABRA1-213ENST00000636340 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.74□□□□□ -1.01
GABRA1-213ENST00000636340 SYNJ2O15056 1496 aa8.74□□□□□ -1.01
GABRA1-213ENST00000636340 GRIN2AQ12879 1464 aa8.73□□□□□ -1.01
GABRA1-213ENST00000636340 TRIM52Q96A61 297 aa8.73□□□□□ -1.01
GABRA1-213ENST00000636340 AKNAQ7Z591 1439 aa8.72□□□□□ -1.01
GABRA1-213ENST00000636340 CEP170Q5SW79 1584 aa8.72□□□□□ -1.01
GABRA1-213ENST00000636340 GCC2Q8IWJ2 1684 aa8.72□□□□□ -1.01
GABRA1-213ENST00000636340 HECW1Q76N89 1606 aa8.72□□□□□ -1.01
GABRA1-213ENST00000636340 RBM42Q9BTD8 480 aaKnown RBP8.71□□□□□ -1.02
GABRA1-213ENST00000636340 KDM6BO15054 1643 aa8.7□□□□□ -1.02
GABRA1-213ENST00000636340 SEMA3EO15041 775 aa8.7□□□□□ -1.02
GABRA1-213ENST00000636340 ANP32EQ9BTT0 268 aa8.7□□□□□ -1.02
GABRA1-213ENST00000636340 BRPF1P55201 1214 aaPredicted RBP8.69□□□□□ -1.02
GABRA1-213ENST00000636340 TMEM132AQ24JP5 1023 aa8.69□□□□□ -1.02
GABRA1-213ENST00000636340 WASHC2AQ641Q2 1341 aa8.69□□□□□ -1.02
GABRA1-213ENST00000636340 NEFLP07196 543 aa8.68□□□□□ -1.02
GABRA1-213ENST00000636340 WDR70Q9NW82 654 aa8.68□□□□□ -1.02
GABRA1-213ENST00000636340 EPRSP07814 1512 aaKnown RBP8.68□□□□□ -1.02
GABRA1-213ENST00000636340 HSPA5P11021 654 aaKnown RBP8.68□□□□□ -1.02
GABRA1-213ENST00000636340 RRP7BPQ9NSQ0 103 aa8.68□□□□□ -1.02
GABRA1-213ENST00000636340 MIA2Q96PC5 1412 aa8.68□□□□□ -1.02
GABRA1-213ENST00000636340 RYDENQ9NUL5 291 aaKnown RBP8.67□□□□□ -1.02
GABRA1-213ENST00000636340 RBM19Q9Y4C8 960 aaKnown RBP8.66□□□□□ -1.02
GABRA1-213ENST00000636340 CCDC61Q9Y6R9 512 aa8.66□□□□□ -1.02
GABRA1-213ENST00000636340 IQGAP2Q13576 1575 aa8.66□□□□□ -1.02
GABRA1-213ENST00000636340 NUP160Q12769 1436 aa8.65□□□□□ -1.02
GABRA1-213ENST00000636340 PDAP1Q13442 181 aaKnown RBP8.65□□□□□ -1.02
GABRA1-213ENST00000636340 CHIC2Q9UKJ5 165 aa8.65□□□□□ -1.02
GABRA1-213ENST00000636340 ERCC6L2Q5T890 1561 aa8.65□□□□□ -1.02
GABRA1-213ENST00000636340 MPHOSPH9Q99550 1183 aa8.65□□□□□ -1.03
GABRA1-213ENST00000636340 CNTLNQ9NXG0 1405 aa8.64□□□□□ -1.03
GABRA1-213ENST00000636340 CDK13Q14004 1512 aaKnown RBP8.64□□□□□ -1.03
GABRA1-213ENST00000636340 IFNL1Q8IU54 200 aa8.64□□□□□ -1.03
GABRA1-213ENST00000636340 EFCAB3Q8N7B9 438 aa8.64□□□□□ -1.03
GABRA1-213ENST00000636340 NCOA1Q15788 1441 aa8.64□□□□□ -1.03
GABRA1-213ENST00000636340 PSEN1P49768 467 aa8.64□□□□□ -1.03
GABRA1-213ENST00000636340 EIF4G2P78344 907 aaKnown RBP eCLIP8.64□□□□□ -1.03
GABRA1-213ENST00000636340 ZNF467Q7Z7K2 595 aaPredicted RBP8.64□□□□□ -1.03
GABRA1-213ENST00000636340 FARP1Q9Y4F1 1045 aaPredicted RBP8.64□□□□□ -1.03
GABRA1-213ENST00000636340 CLASP1Q7Z460 1538 aa8.63□□□□□ -1.03
GABRA1-213ENST00000636340 ZC3H15Q8WU90 426 aaKnown RBP8.63□□□□□ -1.03
GABRA1-213ENST00000636340 L3MBTL2Q969R5 705 aa8.63□□□□□ -1.03
GABRA1-213ENST00000636340 SLC24A3Q9HC58 644 aa8.63□□□□□ -1.03
GABRA1-213ENST00000636340 PHF8Q9UPP1 1060 aa8.63□□□□□ -1.03
GABRA1-213ENST00000636340 ROCK1Q13464 1354 aa8.63□□□□□ -1.03
GABRA1-213ENST00000636340 ANKRD30BQ9BXX2 1392 aa8.63□□□□□ -1.03
GABRA1-213ENST00000636340 C11orf95C9JLR9 678 aaPredicted RBP8.62□□□□□ -1.03
GABRA1-213ENST00000636340 HNRNPUQ00839 825 aaKnown RBP eCLIP8.62□□□□□ -1.03
GABRA1-213ENST00000636340 RPRD2Q5VT52 1461 aaKnown RBP8.62□□□□□ -1.03
GABRA1-213ENST00000636340 TEX14Q8IWB6 1497 aa8.62□□□□□ -1.03
GABRA1-213ENST00000636340 CCDC7Q96M83 1385 aa8.62□□□□□ -1.03
GABRA1-213ENST00000636340 JPH4Q96JJ6 628 aa8.62□□□□□ -1.03
GABRA1-213ENST00000636340 CABP2Q9NPB3 220 aa8.62□□□□□ -1.03
GABRA1-213ENST00000636340 DAPK1P53355 1430 aa8.61□□□□□ -1.03
GABRA1-213ENST00000636340 NCKAP5LQ9HCH0 1330 aa8.61□□□□□ -1.03
GABRA1-213ENST00000636340 CCDC184Q52MB2 194 aa8.61□□□□□ -1.03
GABRA1-213ENST00000636340 FBXO22Q8NEZ5 403 aa8.61□□□□□ -1.03
GABRA1-213ENST00000636340 DNMT1P26358 1616 aaKnown RBP8.61□□□□□ -1.03
GABRA1-213ENST00000636340 KIAA0586Q9BVV6 1533 aa8.61□□□□□ -1.03
GABRA1-213ENST00000636340 ABCC5O15440 1437 aa8.61□□□□□ -1.03
GABRA1-213ENST00000636340 SPATA31E1Q6ZUB1 1445 aa8.61□□□□□ -1.03
GABRA1-213ENST00000636340 NBPF8Q3BBV2 869 aa8.6□□□□□ -1.03
GABRA1-213ENST00000636340 PRG4Q92954 1404 aaPredicted RBP8.59□□□□□ -1.03
GABRA1-213ENST00000636340 MAP3K13O43283 966 aa8.59□□□□□ -1.03
GABRA1-213ENST00000636340 ERICH6BQ5W0A0 696 aa8.59□□□□□ -1.03
GABRA1-213ENST00000636340 C14orf37Q86TY3 774 aa8.59□□□□□ -1.03
GABRA1-213ENST00000636340 PRKRIP1Q9H875 184 aaPredicted RBP8.59□□□□□ -1.03
GABRA1-213ENST00000636340 DISP1Q96F81 1524 aa8.59□□□□□ -1.04
GABRA1-213ENST00000636340 NUP153P49790 1475 aaKnown RBP8.58□□□□□ -1.04
GABRA1-213ENST00000636340 POLR1AO95602 1720 aaPredicted RBP8.58□□□□□ -1.04
GABRA1-213ENST00000636340 KIAA0556O60303 1618 aa8.57□□□□□ -1.04
GABRA1-213ENST00000636340 ARID3CA6NKF2 412 aa8.57□□□□□ -1.04
GABRA1-213ENST00000636340 NEUROD2Q15784 382 aa8.57□□□□□ -1.04
GABRA1-213ENST00000636340 E2F4Q16254 413 aa8.57□□□□□ -1.04
GABRA1-213ENST00000636340 SHROOM2Q13796 1616 aa8.57□□□□□ -1.04
GABRA1-213ENST00000636340 RIMBP3CA6NJZ7 1639 aa8.57□□□□□ -1.04
GABRA1-213ENST00000636340 RIMBP3BA6NNM3 1639 aa8.57□□□□□ -1.04
GABRA1-213ENST00000636340 RIMBP3Q9UFD9 1639 aa8.57□□□□□ -1.04
GABRA1-213ENST00000636340 PZPP20742 1482 aa8.56□□□□□ -1.04
GABRA1-213ENST00000636340 ZNF644Q9H582 1327 aaPredicted RBP8.56□□□□□ -1.04
GABRA1-213ENST00000636340 IRX6P78412 446 aaPredicted RBP8.56□□□□□ -1.04
GABRA1-213ENST00000636340 MBD5Q9P267 1494 aa8.56□□□□□ -1.04
GABRA1-213ENST00000636340 KIF7Q2M1P5 1343 aa8.56□□□□□ -1.04
GABRA1-213ENST00000636340 FANCIQ9NVI1 1328 aa8.56□□□□□ -1.04
GABRA1-213ENST00000636340 PRKAR2AP13861 404 aaKnown RBP8.56□□□□□ -1.04
GABRA1-213ENST00000636340 ZBED9Q6R2W3 1325 aa8.55□□□□□ -1.04
GABRA1-213ENST00000636340 RAPGEF6Q8TEU7 1601 aa8.55□□□□□ -1.04
GABRA1-213ENST00000636340 MS4A4AQ96JQ5 239 aa8.55□□□□□ -1.04
GABRA1-213ENST00000636340 CYB5RLQ6IPT4 315 aa8.54□□□□□ -1.04
GABRA1-213ENST00000636340 ARHGEF1Q92888 912 aaKnown RBP8.54□□□□□ -1.04
GABRA1-213ENST00000636340 PPP4R2Q9NY27 417 aa8.54□□□□□ -1.04
GABRA1-213ENST00000636340 TESPA1A2RU30 521 aaPredicted RBP8.54□□□□□ -1.04
GABRA1-213ENST00000636340 LARP6Q9BRS8 491 aaKnown RBP8.53□□□□□ -1.04
GABRA1-213ENST00000636340 CDK11AQ9UQ88 783 aaPredicted RBP8.53□□□□□ -1.04
GABRA1-213ENST00000636340 ADGRL2O95490 1459 aa8.53□□□□□ -1.04
GABRA1-213ENST00000636340 DHX29Q7Z478 1369 aaKnown RBP8.53□□□□□ -1.04
GABRA1-213ENST00000636340 MRS2Q9HD23 443 aa8.53□□□□□ -1.04
GABRA1-213ENST00000636340 TROQ12816 1431 aaPredicted RBP8.52□□□□□ -1.05
GABRA1-213ENST00000636340 FAM9BQ8IZU0 186 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms