RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-224ENST00000621573 FAM163AQ96GL9 167 aaPredicted RBP13.88□□□□□ -0.19
TARDBP-224ENST00000621573 BCANQ96GW7 911 aa13.88□□□□□ -0.19
TARDBP-224ENST00000621573 DNMBPQ6XZF7 1577 aa13.88□□□□□ -0.19
TARDBP-224ENST00000621573 ANO8Q9HCE9 1232 aaPredicted RBP13.87□□□□□ -0.19
TARDBP-224ENST00000621573 ZNF316A6NFI3 1004 aaPredicted RBP13.84□□□□□ -0.19
TARDBP-224ENST00000621573 CUX1P39880 1505 aa13.84□□□□□ -0.19
TARDBP-224ENST00000621573 WRNQ14191 1432 aaPredicted RBP eCLIP13.83□□□□□ -0.2
TARDBP-224ENST00000621573 IFT140Q96RY7 1462 aa13.82□□□□□ -0.2
TARDBP-224ENST00000621573 LCE2DQ5TA82 110 aaPredicted RBP13.82□□□□□ -0.2
TARDBP-224ENST00000621573 TESPA1A2RU30 521 aaPredicted RBP13.81□□□□□ -0.2
TARDBP-224ENST00000621573 PTGER2P43116 358 aa13.81□□□□□ -0.2
TARDBP-224ENST00000621573 SOGA1O94964 1423 aa13.81□□□□□ -0.2
TARDBP-224ENST00000621573 POLA1P09884 1462 aaPredicted RBP13.8□□□□□ -0.2
TARDBP-224ENST00000621573 MLLT3P42568 568 aaPredicted RBP13.8□□□□□ -0.2
TARDBP-224ENST00000621573 FGD5Q6ZNL6 1462 aa13.8□□□□□ -0.2
TARDBP-224ENST00000621573 DDX12PQ92771 950 aa13.78□□□□□ -0.2
TARDBP-224ENST00000621573 LHX6Q9UPM6 363 aa13.78□□□□□ -0.2
TARDBP-224ENST00000621573 RAD54L2Q9Y4B4 1467 aa13.78□□□□□ -0.2
TARDBP-224ENST00000621573 MARVELD3Q96A59 401 aa13.77□□□□□ -0.21
TARDBP-224ENST00000621573 GRXCR2A6NFK2 248 aa13.76□□□□□ -0.21
TARDBP-224ENST00000621573 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
TARDBP-224ENST00000621573 TDRD9Q8NDG6 1382 aaKnown RBP13.73□□□□□ -0.21
TARDBP-224ENST00000621573 EMP3P54852 163 aa13.73□□□□□ -0.21
TARDBP-224ENST00000621573 SYNJ1O43426 1573 aa13.72□□□□□ -0.21
TARDBP-224ENST00000621573 JPH4Q96JJ6 628 aa13.72□□□□□ -0.21
TARDBP-224ENST00000621573 PCDHGA10Q9Y5H3 936 aa13.72□□□□□ -0.21
TARDBP-224ENST00000621573 PHF14O94880 888 aa13.71□□□□□ -0.21
TARDBP-224ENST00000621573 FOSBP53539 338 aa13.71□□□□□ -0.21
TARDBP-224ENST00000621573 AQRO60306 1485 aaKnown RBP eCLIP13.71□□□□□ -0.21
TARDBP-224ENST00000621573 TOP2BQ02880 1626 aa13.71□□□□□ -0.22
TARDBP-224ENST00000621573 SMYD5Q6GMV2 418 aa13.7□□□□□ -0.22
TARDBP-224ENST00000621573 ZNF454Q8N9F8 522 aa13.7□□□□□ -0.22
TARDBP-224ENST00000621573 ERBB3P21860 1342 aa13.69□□□□□ -0.22
TARDBP-224ENST00000621573 TARBP1Q13395 1621 aaKnown RBP13.69□□□□□ -0.22
TARDBP-224ENST00000621573 OSBPP22059 807 aa13.69□□□□□ -0.22
TARDBP-224ENST00000621573 BIVM-ERCC5R4GMW8 1640 aa13.68□□□□□ -0.22
TARDBP-224ENST00000621573 PSDA5PKW4 1024 aaPredicted RBP13.67□□□□□ -0.22
TARDBP-224ENST00000621573 EPAS1Q99814 870 aa13.67□□□□□ -0.22
TARDBP-224ENST00000621573 FAM205CA6NFA0 338 aa13.66□□□□□ -0.22
TARDBP-224ENST00000621573 PRIM1P49642 420 aaKnown RBP13.66□□□□□ -0.22
TARDBP-224ENST00000621573 VARS2Q5ST30 1063 aaKnown RBP13.66□□□□□ -0.22
TARDBP-224ENST00000621573 TYW1BQ6NUM6 668 aa13.66□□□□□ -0.22
TARDBP-224ENST00000621573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.66□□□□□ -0.22
TARDBP-224ENST00000621573 TULP1O00294 542 aaPredicted RBP13.65□□□□□ -0.22
TARDBP-224ENST00000621573 ABCA10Q8WWZ4 1543 aa13.64□□□□□ -0.23
TARDBP-224ENST00000621573 PPP4R3BQ5MIZ7 849 aa13.64□□□□□ -0.23
TARDBP-224ENST00000621573 FBXW7Q969H0 707 aa13.64□□□□□ -0.23
TARDBP-224ENST00000621573 ZDHHC16Q969W1 377 aa13.64□□□□□ -0.23
TARDBP-224ENST00000621573 POTEB3A0JP26 581 aa13.63□□□□□ -0.23
TARDBP-224ENST00000621573 RBM26Q5T8P6 1007 aaKnown RBP13.63□□□□□ -0.23
TARDBP-224ENST00000621573 POTEBQ6S5H4 581 aa13.63□□□□□ -0.23
TARDBP-224ENST00000621573 EIF4G3O43432 1585 aaKnown RBP13.62□□□□□ -0.23
TARDBP-224ENST00000621573 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
TARDBP-224ENST00000621573 EN1Q05925 392 aaPredicted RBP13.61□□□□□ -0.23
TARDBP-224ENST00000621573 RBM33Q96EV2 1170 aaKnown RBP13.61□□□□□ -0.23
TARDBP-224ENST00000621573 HS3ST6Q96QI5 342 aa13.61□□□□□ -0.23
TARDBP-224ENST00000621573 ADAM33Q9BZ11 813 aa13.61□□□□□ -0.23
TARDBP-224ENST00000621573 LMOD2Q6P5Q4 547 aa13.6□□□□□ -0.23
TARDBP-224ENST00000621573 GRIN2BQ13224 1484 aa13.6□□□□□ -0.23
TARDBP-224ENST00000621573 MAP3K7O43318 606 aa13.58□□□□□ -0.24
TARDBP-224ENST00000621573 CHMP7Q8WUX9 453 aaPredicted RBP13.58□□□□□ -0.24
TARDBP-224ENST00000621573 WDR97A6NE52 1622 aa13.57□□□□□ -0.24
TARDBP-224ENST00000621573 BCL2L12Q9HB09 334 aa13.57□□□□□ -0.24
TARDBP-224ENST00000621573 SNAPC4Q5SXM2 1469 aa13.56□□□□□ -0.24
TARDBP-224ENST00000621573 TSR1Q2NL82 804 aaKnown RBP13.55□□□□□ -0.24
TARDBP-224ENST00000621573 ZNF687Q8N1G0 1237 aa13.55□□□□□ -0.24
TARDBP-224ENST00000621573 KIF27Q86VH2 1401 aa13.55□□□□□ -0.24
TARDBP-224ENST00000621573 C6orf132Q5T0Z8 1188 aa13.54□□□□□ -0.24
TARDBP-224ENST00000621573 MAGI1Q96QZ7 1491 aaPredicted RBP13.53□□□□□ -0.24
TARDBP-224ENST00000621573 ABCA5Q8WWZ7 1642 aa13.53□□□□□ -0.24
TARDBP-224ENST00000621573 NUTM2FA1L443 756 aa13.52□□□□□ -0.25
TARDBP-224ENST00000621573 POTEGQ6S5H5 508 aa13.52□□□□□ -0.25
TARDBP-224ENST00000621573 POTEEQ6S8J3 1075 aa13.52□□□□□ -0.25
TARDBP-224ENST00000621573 CDHR5Q9HBB8 845 aa13.52□□□□□ -0.25
TARDBP-224ENST00000621573 POTEMA6NI47 508 aa13.5□□□□□ -0.25
TARDBP-224ENST00000621573 PTPREP23469 700 aa13.5□□□□□ -0.25
TARDBP-224ENST00000621573 GPIHBP1Q8IV16 184 aa13.5□□□□□ -0.25
TARDBP-224ENST00000621573 KCNK17Q96T54 332 aa13.49□□□□□ -0.25
TARDBP-224ENST00000621573 SYNJ2O15056 1496 aa13.48□□□□□ -0.25
TARDBP-224ENST00000621573 IGF1RP08069 1367 aa13.48□□□□□ -0.25
TARDBP-224ENST00000621573 NPDC1Q9NQX5 325 aaPredicted RBP13.48□□□□□ -0.25
TARDBP-224ENST00000621573 AXIN2Q9Y2T1 843 aa13.48□□□□□ -0.25
TARDBP-224ENST00000621573 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
TARDBP-224ENST00000621573 ERICH3Q5RHP9 1530 aa13.47□□□□□ -0.25
TARDBP-224ENST00000621573 PBRM1Q86U86 1689 aa13.47□□□□□ -0.25
TARDBP-224ENST00000621573 ARHGAP33O14559 1287 aa13.46□□□□□ -0.25
TARDBP-224ENST00000621573 GPR37O15354 613 aa13.46□□□□□ -0.25
TARDBP-224ENST00000621573 COL9A1P20849 921 aa13.46□□□□□ -0.25
TARDBP-224ENST00000621573 PSEN2P49810 448 aa13.46□□□□□ -0.25
TARDBP-224ENST00000621573 PTGDRQ13258 359 aa13.46□□□□□ -0.25
TARDBP-224ENST00000621573 PBX2P40425 430 aa13.45□□□□□ -0.26
TARDBP-224ENST00000621573 ZC3H15Q8WU90 426 aaKnown RBP13.44□□□□□ -0.26
TARDBP-224ENST00000621573 PPP1R3GB7ZBB8 358 aa13.43□□□□□ -0.26
TARDBP-224ENST00000621573 FCHSD2O94868 740 aa13.43□□□□□ -0.26
TARDBP-224ENST00000621573 KCNH8Q96L42 1107 aa13.43□□□□□ -0.26
TARDBP-224ENST00000621573 RUSC2Q8N2Y8 1516 aa13.43□□□□□ -0.26
TARDBP-224ENST00000621573 CARMIL1Q5VZK9 1371 aa13.43□□□□□ -0.26
TARDBP-224ENST00000621573 CHD1O14646 1710 aa13.42□□□□□ -0.26
TARDBP-224ENST00000621573 ADAMTS12P58397 1594 aa13.41□□□□□ -0.26
TARDBP-224ENST00000621573 DMRTA1Q5VZB9 504 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms