RNA–Protein interactions for RNA: ENST00000615234.4

POLR2E-213, Transcript of RNA polymerase II subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2E, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-213ENST00000615234 SYCP2Q9BX26 1530 aa20.21■□□□□ 0.83
POLR2E-213ENST00000615234 TTC37Q6PGP7 1564 aa20.2■□□□□ 0.82
POLR2E-213ENST00000615234 SHROOM2Q13796 1616 aa20.19■□□□□ 0.82
POLR2E-213ENST00000615234 MAST1Q9Y2H9 1570 aa20.19■□□□□ 0.82
POLR2E-213ENST00000615234 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.18■□□□□ 0.82
POLR2E-213ENST00000615234 ARHGAP5Q13017 1502 aa20.17■□□□□ 0.82
POLR2E-213ENST00000615234 UNC13BO14795 1591 aa20.17■□□□□ 0.82
POLR2E-213ENST00000615234 SMG6Q86US8 1419 aaKnown RBP20.17■□□□□ 0.82
POLR2E-213ENST00000615234 CYB5RLQ6IPT4 315 aa20.17■□□□□ 0.82
POLR2E-213ENST00000615234 PNISRQ8TF01 805 aaKnown RBP20.16■□□□□ 0.82
POLR2E-213ENST00000615234 CCDC144AA2RUR9 1427 aa20.15■□□□□ 0.82
POLR2E-213ENST00000615234 TRPM1Q7Z4N2 1603 aa20.15■□□□□ 0.82
POLR2E-213ENST00000615234 PRAG1Q86YV5 1406 aa20.14■□□□□ 0.82
POLR2E-213ENST00000615234 PLA2R1Q13018 1463 aa20.14■□□□□ 0.82
POLR2E-213ENST00000615234 E9PCH4 1651 aa20.14■□□□□ 0.81
POLR2E-213ENST00000615234 ABCC2Q92887 1545 aa20.12■□□□□ 0.81
POLR2E-213ENST00000615234 PLXNC1O60486 1568 aa20.12■□□□□ 0.81
POLR2E-213ENST00000615234 TMC1Q8TDI8 760 aa20.12■□□□□ 0.81
POLR2E-213ENST00000615234 MYO5CQ9NQX4 1742 aa20.12■□□□□ 0.81
POLR2E-213ENST00000615234 NUDCQ9Y266 331 aa20.11■□□□□ 0.81
POLR2E-213ENST00000615234 B4GALNT3Q6L9W6 998 aa20.11■□□□□ 0.81
POLR2E-213ENST00000615234 IQGAP3Q86VI3 1631 aa20.1■□□□□ 0.81
POLR2E-213ENST00000615234 KTN1Q86UP2 1357 aaKnown RBP20.09■□□□□ 0.81
POLR2E-213ENST00000615234 PLEKHH2Q8IVE3 1493 aa20.09■□□□□ 0.81
POLR2E-213ENST00000615234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.09■□□□□ 0.811e-12■□□□□ 9.3
POLR2E-213ENST00000615234 A2MP01023 1474 aa20.08■□□□□ 0.81
POLR2E-213ENST00000615234 LRPPRCP42704 1394 aaKnown RBP20.08■□□□□ 0.8
POLR2E-213ENST00000615234 RGL3Q3MIN7 710 aa20.08■□□□□ 0.8
POLR2E-213ENST00000615234 RNF123Q5XPI4 1314 aa20.07■□□□□ 0.8
POLR2E-213ENST00000615234 MYBBP1AQ9BQG0 1328 aaKnown RBP20.07■□□□□ 0.8
POLR2E-213ENST00000615234 BRD4O60885 1362 aaPredicted RBP20.07■□□□□ 0.8
POLR2E-213ENST00000615234 RALBP1Q15311 655 aa20.07■□□□□ 0.8
POLR2E-213ENST00000615234 NBPF1Q3BBV0 1214 aa20.07■□□□□ 0.8
POLR2E-213ENST00000615234 GPRASP1Q5JY77 1395 aa20.07■□□□□ 0.8
POLR2E-213ENST00000615234 DUOX2Q9NRD8 1548 aa20.05■□□□□ 0.8
POLR2E-213ENST00000615234 RIMBP3CA6NJZ7 1639 aa20.05■□□□□ 0.8
POLR2E-213ENST00000615234 RIMBP3BA6NNM3 1639 aa20.05■□□□□ 0.8
POLR2E-213ENST00000615234 RIMBP3Q9UFD9 1639 aa20.05■□□□□ 0.8
POLR2E-213ENST00000615234 FANCIQ9NVI1 1328 aa20.05■□□□□ 0.8
POLR2E-213ENST00000615234 MSH5O43196 834 aa20.04■□□□□ 0.8
POLR2E-213ENST00000615234 MAGI2Q86UL8 1455 aa20.04■□□□□ 0.8
POLR2E-213ENST00000615234 SENP3-EIF4A1A0A087X0R7 540 aa20.04■□□□□ 0.8
POLR2E-213ENST00000615234 LAMC1P11047 1609 aa20.03■□□□□ 0.8
POLR2E-213ENST00000615234 DNAJC5Q9H3Z4 198 aa20.03■□□□□ 0.8
POLR2E-213ENST00000615234 ATP10AO60312 1499 aa20.03■□□□□ 0.8
POLR2E-213ENST00000615234 PRDM15P57071 1507 aaPredicted RBP20.02■□□□□ 0.8
POLR2E-213ENST00000615234 PLCH2O75038 1416 aa20.01■□□□□ 0.79
POLR2E-213ENST00000615234 ERBINQ96RT1 1412 aa20.01■□□□□ 0.79
POLR2E-213ENST00000615234 PARD3Q8TEW0 1356 aa20■□□□□ 0.79
POLR2E-213ENST00000615234 COL17A1Q9UMD9 1497 aaPredicted RBP19.99■□□□□ 0.79
POLR2E-213ENST00000615234 ZCCHC11Q5TAX3 1644 aaKnown RBP19.99■□□□□ 0.79
POLR2E-213ENST00000615234 PER1O15534 1290 aaPredicted RBP19.99■□□□□ 0.79
POLR2E-213ENST00000615234 TESK2Q96S53 571 aa19.98■□□□□ 0.79
POLR2E-213ENST00000615234 EIF2AK4Q9P2K8 1649 aaKnown RBP19.98■□□□□ 0.79
POLR2E-213ENST00000615234 EFCAB2Q5VUJ9 269 aa19.97■□□□□ 0.79
POLR2E-213ENST00000615234 ABCC1P33527 1531 aa19.97■□□□□ 0.79
POLR2E-213ENST00000615234 DISP3Q9P2K9 1392 aa19.96■□□□□ 0.79
POLR2E-213ENST00000615234 NLRP13Q86W25 1043 aa19.96■□□□□ 0.79
POLR2E-213ENST00000615234 TRAPPC8Q9Y2L5 1435 aa19.95■□□□□ 0.78
POLR2E-213ENST00000615234 UHRF1BP1LA0JNW5 1464 aa19.95■□□□□ 0.78
POLR2E-213ENST00000615234 RNF17Q9BXT8 1623 aaKnown RBP19.91■□□□□ 0.78
POLR2E-213ENST00000615234 WASHC2CQ9Y4E1 1318 aa19.91■□□□□ 0.78
POLR2E-213ENST00000615234 CCDC136Q96JN2 1154 aa19.89■□□□□ 0.77
POLR2E-213ENST00000615234 PANK3Q9H999 370 aa19.88■□□□□ 0.77
POLR2E-213ENST00000615234 TMF1P82094 1093 aa19.88■□□□□ 0.77
POLR2E-213ENST00000615234 CC2D1BQ5T0F9 858 aaKnown RBP19.87■□□□□ 0.77
POLR2E-213ENST00000615234 SPAG9O60271 1321 aaKnown RBP19.86■□□□□ 0.77
POLR2E-213ENST00000615234 MADDQ8WXG6 1647 aa19.85■□□□□ 0.77
POLR2E-213ENST00000615234 RTEL1-TNFRSF6BF6WH68 1400 aa19.85■□□□□ 0.77
POLR2E-213ENST00000615234 ZFYVE16Q7Z3T8 1539 aa19.85■□□□□ 0.77
POLR2E-213ENST00000615234 AFAP1Q8N556 730 aa19.84■□□□□ 0.77
POLR2E-213ENST00000615234 SALL2Q9Y467 1007 aaPredicted RBP19.84■□□□□ 0.77
POLR2E-213ENST00000615234 ARAP3Q8WWN8 1544 aa19.84■□□□□ 0.77
POLR2E-213ENST00000615234 TRPM2O94759 1503 aa19.83■□□□□ 0.77
POLR2E-213ENST00000615234 RRP1P56182 461 aaKnown RBP19.83■□□□□ 0.77
POLR2E-213ENST00000615234 PDE3BQ13370 1112 aa19.83■□□□□ 0.77
POLR2E-213ENST00000615234 IQGAP1P46940 1657 aa19.82■□□□□ 0.76
POLR2E-213ENST00000615234 NPM1P06748 294 aaKnown RBP eCLIP19.82■□□□□ 0.76
POLR2E-213ENST00000615234 INSRP06213 1382 aa19.82■□□□□ 0.76
POLR2E-213ENST00000615234 RCAN3Q9UKA8 241 aa19.81■□□□□ 0.76
POLR2E-213ENST00000615234 PTPRTO14522 1441 aa19.81■□□□□ 0.76
POLR2E-213ENST00000615234 DEPDC5O75140 1603 aa19.81■□□□□ 0.76
POLR2E-213ENST00000615234 CEP152O94986 1710 aa19.81■□□□□ 0.76
POLR2E-213ENST00000615234 BLMP54132 1417 aaPredicted RBP19.81■□□□□ 0.76
POLR2E-213ENST00000615234 ZMYM4Q5VZL5 1548 aa19.81■□□□□ 0.76
POLR2E-213ENST00000615234 SPHKAPQ2M3C7 1700 aa19.81■□□□□ 0.76
POLR2E-213ENST00000615234 WDR7Q9Y4E6 1490 aa19.8■□□□□ 0.76
POLR2E-213ENST00000615234 CLTCL1P53675 1640 aa19.79■□□□□ 0.76
POLR2E-213ENST00000615234 CDCA7LQ96GN5 454 aa19.78■□□□□ 0.76
POLR2E-213ENST00000615234 ERICH6Q7L0X2 663 aa19.77■□□□□ 0.76
POLR2E-213ENST00000615234 TET3O43151 1660 aa19.76■□□□□ 0.75
POLR2E-213ENST00000615234 EXOC6Q8TAG9 804 aa19.76■□□□□ 0.75
POLR2E-213ENST00000615234 SCAPERQ9BY12 1400 aa19.75■□□□□ 0.75
POLR2E-213ENST00000615234 STAC3Q96MF2 364 aa19.75■□□□□ 0.75
POLR2E-213ENST00000615234 INO80Q9ULG1 1556 aaPredicted RBP19.75■□□□□ 0.75
POLR2E-213ENST00000615234 SCAF11Q99590 1463 aaKnown RBP19.74■□□□□ 0.75
POLR2E-213ENST00000615234 VWDEQ8N2E2 1590 aa19.74■□□□□ 0.75
POLR2E-213ENST00000615234 ATP7AQ04656 1500 aa19.74■□□□□ 0.75
POLR2E-213ENST00000615234 ABCA9Q8IUA7 1624 aa19.74■□□□□ 0.75
POLR2E-213ENST00000615234 FANCAO15360 1455 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms