RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-223ENST00000614293 TERF2IPQ9NYB0 399 aa15.13■□□□□ 0.01
ABCA2-223ENST00000614293 C1orf141Q5JVX7 400 aa15.12■□□□□ 0.01
ABCA2-223ENST00000614293 SF3B2Q13435 895 aaKnown RBP15.12■□□□□ 0.01
ABCA2-223ENST00000614293 SENP3-EIF4A1A0A087X0R7 540 aa15.12■□□□□ 0.01
ABCA2-223ENST00000614293 SF3A1Q15459 793 aaKnown RBP15.11■□□□□ 0.01
ABCA2-223ENST00000614293 DCAF11Q8TEB1 546 aa15.11■□□□□ 0.01
ABCA2-223ENST00000614293 RAD21O60216 631 aa15.11■□□□□ 0.01
ABCA2-223ENST00000614293 SMC4Q9NTJ3 1288 aa15.11■□□□□ 0.01
ABCA2-223ENST00000614293 KIF16BQ96L93 1317 aa15.1■□□□□ 0.01
ABCA2-223ENST00000614293 PPP4R2Q9NY27 417 aa15.1■□□□□ 0.01
ABCA2-223ENST00000614293 WWC1Q8IX03 1113 aa15.1■□□□□ 0.01
ABCA2-223ENST00000614293 ODF2Q5BJF6 829 aa15.1■□□□□ 0.01
ABCA2-223ENST00000614293 APBB1O00213 710 aa15.1■□□□□ 0.01
ABCA2-223ENST00000614293 HIRIP3Q9BW71 556 aaPredicted RBP15.09■□□□□ 0.01
ABCA2-223ENST00000614293 FBXO3Q9UK99 471 aa15.09■□□□□ 0.01
ABCA2-223ENST00000614293 RDXP35241 583 aaKnown RBP15.08■□□□□ 0
ABCA2-223ENST00000614293 FBXW7Q969H0 707 aa15.08■□□□□ 0
ABCA2-223ENST00000614293 TIMELESSQ9UNS1 1208 aa15.07■□□□□ 0
ABCA2-223ENST00000614293 HOOK1Q9UJC3 728 aaKnown RBP15.06■□□□□ 0
ABCA2-223ENST00000614293 ANKRD20A12PQ8NF67 263 aa15.06■□□□□ 0
ABCA2-223ENST00000614293 CPLX2Q6PUV4 134 aaKnown RBP15.06■□□□□ 0
ABCA2-223ENST00000614293 H3BQV1 296 aa15.05■□□□□ 0
ABCA2-223ENST00000614293 IFFO2Q5TF58 517 aa15.05■□□□□ 0
ABCA2-223ENST00000614293 KTN1Q86UP2 1357 aaKnown RBP15.05■□□□□ 0
ABCA2-223ENST00000614293 RBM33Q96EV2 1170 aaKnown RBP15.05■□□□□ 0
ABCA2-223ENST00000614293 RRP12Q5JTH9 1297 aaKnown RBP15.05■□□□□ -0
ABCA2-223ENST00000614293 ITPRIPQ8IWB1 547 aa15.05■□□□□ -0
ABCA2-223ENST00000614293 RWDD1Q9H446 243 aaPredicted RBP15.05■□□□□ -0
ABCA2-223ENST00000614293 PAF1Q8N7H5 531 aa15.04■□□□□ -0
ABCA2-223ENST00000614293 TRIM29Q14134 588 aa15.04■□□□□ -0
ABCA2-223ENST00000614293 TTC5Q8N0Z6 440 aa15.04■□□□□ -0
ABCA2-223ENST00000614293 SPRYD3Q8NCJ5 442 aa15.04■□□□□ -0
ABCA2-223ENST00000614293 HSP90AA2PQ14568 343 aaPredicted RBP15.03■□□□□ -0
ABCA2-223ENST00000614293 IPO7O95373 1038 aaKnown RBP15.03■□□□□ -0
ABCA2-223ENST00000614293 U2AF1L5P0DN76 240 aaPredicted RBP15.03■□□□□ -0
ABCA2-223ENST00000614293 U2AF1Q01081 240 aaKnown RBP eCLIP15.03■□□□□ -0
ABCA2-223ENST00000614293 NEXNQ0ZGT2 675 aa15.03■□□□□ -0
ABCA2-223ENST00000614293 PMFBP1Q8TBY8 1022 aa15.02■□□□□ -0
ABCA2-223ENST00000614293 CT47A1Q5JQC4 288 aaPredicted RBP15.02□□□□□ -0.01
ABCA2-223ENST00000614293 HMGB2P26583 209 aaKnown RBP15.02□□□□□ -0.01
ABCA2-223ENST00000614293 SMARCA2P51531 1590 aa15.01□□□□□ -0.01
ABCA2-223ENST00000614293 DHX16O60231 1041 aaKnown RBP15.01□□□□□ -0.01
ABCA2-223ENST00000614293 FAM184AQ8NB25 1140 aa15.01□□□□□ -0.01
ABCA2-223ENST00000614293 ERICH2A1L162 156 aa15□□□□□ -0.01
ABCA2-223ENST00000614293 GPS2Q13227 327 aa15□□□□□ -0.01
ABCA2-223ENST00000614293 ROCK2O75116 1388 aaKnown RBP15□□□□□ -0.01
ABCA2-223ENST00000614293 TCERG1O14776 1098 aaKnown RBP14.99□□□□□ -0.01
ABCA2-223ENST00000614293 SLC4A10Q6U841 1118 aa14.99□□□□□ -0.01
ABCA2-223ENST00000614293 PCMTD1Q96MG8 357 aaPredicted RBP14.99□□□□□ -0.01
ABCA2-223ENST00000614293 ST18O60284 1047 aa14.99□□□□□ -0.01
ABCA2-223ENST00000614293 SUPT16HQ9Y5B9 1047 aaKnown RBP14.98□□□□□ -0.01
ABCA2-223ENST00000614293 SYTL4Q96C24 671 aaPredicted RBP14.97□□□□□ -0.01
ABCA2-223ENST00000614293 EFCAB2Q5VUJ9 269 aa14.97□□□□□ -0.01
ABCA2-223ENST00000614293 CALRP27797 417 aaKnown RBP14.97□□□□□ -0.01
ABCA2-223ENST00000614293 GOLGA6L19H0YKK7 550 aa14.97□□□□□ -0.01
ABCA2-223ENST00000614293 TMEM132AQ24JP5 1023 aa14.97□□□□□ -0.01
ABCA2-223ENST00000614293 ATP6V1DQ9Y5K8 247 aa14.96□□□□□ -0.01
ABCA2-223ENST00000614293 UACAQ9BZF9 1416 aa14.96□□□□□ -0.01
ABCA2-223ENST00000614293 EPS15P42566 896 aa14.96□□□□□ -0.01
ABCA2-223ENST00000614293 LTV1Q96GA3 475 aaPredicted RBP14.96□□□□□ -0.01
ABCA2-223ENST00000614293 TRDNQ13061 729 aa14.95□□□□□ -0.02
ABCA2-223ENST00000614293 WASHC2CQ9Y4E1 1318 aa14.95□□□□□ -0.02
ABCA2-223ENST00000614293 VPS8Q8N3P4 1428 aa14.95□□□□□ -0.02
ABCA2-223ENST00000614293 CDR1P51861 262 aa14.95□□□□□ -0.02
ABCA2-223ENST00000614293 CCER2I3L3R5 266 aa14.94□□□□□ -0.02
ABCA2-223ENST00000614293 ARHGAP35Q9NRY4 1499 aa14.94□□□□□ -0.02
ABCA2-223ENST00000614293 RBM19Q9Y4C8 960 aaKnown RBP14.94□□□□□ -0.02
ABCA2-223ENST00000614293 TOP2AP11388 1531 aaKnown RBP14.93□□□□□ -0.02
ABCA2-223ENST00000614293 DDX58O95786 925 aaKnown RBP14.93□□□□□ -0.02
ABCA2-223ENST00000614293 ATF3P18847 181 aa14.93□□□□□ -0.02
ABCA2-223ENST00000614293 TEFQ10587 303 aa14.93□□□□□ -0.02
ABCA2-223ENST00000614293 APPP05067 770 aa14.92□□□□□ -0.02
ABCA2-223ENST00000614293 MYO6Q9UM54 1294 aa14.92□□□□□ -0.02
ABCA2-223ENST00000614293 PDS5BQ9NTI5 1447 aa14.92□□□□□ -0.02
ABCA2-223ENST00000614293 WIZO95785 1651 aa14.91□□□□□ -0.02
ABCA2-223ENST00000614293 B4GALNT3Q6L9W6 998 aa14.91□□□□□ -0.02
ABCA2-223ENST00000614293 RUFY2Q8WXA3 655 aa14.91□□□□□ -0.02
ABCA2-223ENST00000614293 PATL2C9JE40 543 aaKnown RBP14.91□□□□□ -0.02
ABCA2-223ENST00000614293 PSME1Q06323 249 aa14.91□□□□□ -0.02
ABCA2-223ENST00000614293 WDHD1O75717 1129 aaPredicted RBP14.9□□□□□ -0.02
ABCA2-223ENST00000614293 ZRSR2Q15696 482 aaKnown RBP14.9□□□□□ -0.02
ABCA2-223ENST00000614293 PRDM2Q13029 1718 aa14.9□□□□□ -0.02
ABCA2-223ENST00000614293 TRIM21P19474 475 aaKnown RBP14.9□□□□□ -0.02
ABCA2-223ENST00000614293 CCDC173Q0VFZ6 552 aa14.9□□□□□ -0.02
ABCA2-223ENST00000614293 BRMS1Q9HCU9 246 aa14.9□□□□□ -0.02
ABCA2-223ENST00000614293 C9orf78Q9NZ63 289 aaPredicted RBP14.89□□□□□ -0.03
ABCA2-223ENST00000614293 SETD5Q9C0A6 1442 aa14.88□□□□□ -0.03
ABCA2-223ENST00000614293 IKQ13123 557 aaPredicted RBP14.88□□□□□ -0.03
ABCA2-223ENST00000614293 ZFYVE27Q5T4F4 411 aa14.88□□□□□ -0.03
ABCA2-223ENST00000614293 GOLGA6L3A6NEY3 463 aa14.87□□□□□ -0.03
ABCA2-223ENST00000614293 RALBP1Q15311 655 aa14.87□□□□□ -0.03
ABCA2-223ENST00000614293 BECN2A8MW95 431 aa14.87□□□□□ -0.03
ABCA2-223ENST00000614293 SAMD1Q6SPF0 538 aaPredicted RBP14.87□□□□□ -0.03
ABCA2-223ENST00000614293 HSP90AB2PQ58FF8 381 aa14.87□□□□□ -0.03
ABCA2-223ENST00000614293 ANKRD30AQ9BXX3 1397 aa14.87□□□□□ -0.03
ABCA2-223ENST00000614293 COG3Q96JB2 828 aa14.86□□□□□ -0.03
ABCA2-223ENST00000614293 DNAI2Q9GZS0 605 aa14.86□□□□□ -0.03
ABCA2-223ENST00000614293 SAFBQ15424 915 aaKnown RBP eCLIP14.86□□□□□ -0.03
ABCA2-223ENST00000614293 XBP1P17861 261 aa14.86□□□□□ -0.03
ABCA2-223ENST00000614293 RSPH4AQ5TD94 716 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms