RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 RAPGEF2Q9Y4G8 1499 aa13.34□□□□□ -0.27
CCL3-205ENST00000613928 PRKCSHP14314 528 aaPredicted RBP13.33□□□□□ -0.28
CCL3-205ENST00000613928 UBTFP17480 764 aaKnown RBP13.33□□□□□ -0.28
CCL3-205ENST00000613928 CLASP1Q7Z460 1538 aa13.32□□□□□ -0.28
CCL3-205ENST00000613928 CEP162Q5TB80 1403 aa13.31□□□□□ -0.28
CCL3-205ENST00000613928 SNAPC4Q5SXM2 1469 aa13.31□□□□□ -0.28
CCL3-205ENST00000613928 EMILIN3Q9NT22 766 aa13.31□□□□□ -0.28
CCL3-205ENST00000613928 ERICH3Q5RHP9 1530 aa13.3□□□□□ -0.28
CCL3-205ENST00000613928 ABCA10Q8WWZ4 1543 aa13.3□□□□□ -0.28
CCL3-205ENST00000613928 TESPA1A2RU30 521 aaPredicted RBP13.3□□□□□ -0.28
CCL3-205ENST00000613928 SEMA3EO15041 775 aa13.3□□□□□ -0.28
CCL3-205ENST00000613928 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.3□□□□□ -0.28
CCL3-205ENST00000613928 IGF1RP08069 1367 aa13.3□□□□□ -0.28
CCL3-205ENST00000613928 TDRD9Q8NDG6 1382 aaKnown RBP13.3□□□□□ -0.28
CCL3-205ENST00000613928 DPYSL4O14531 572 aa13.28□□□□□ -0.28
CCL3-205ENST00000613928 SPDYE16A6NNV3 312 aaPredicted RBP13.27□□□□□ -0.29
CCL3-205ENST00000613928 SMYD5Q6GMV2 418 aa13.27□□□□□ -0.29
CCL3-205ENST00000613928 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.27□□□□□ -0.29
CCL3-205ENST00000613928 WDR97A6NE52 1622 aa13.26□□□□□ -0.29
CCL3-205ENST00000613928 LMOD2Q6P5Q4 547 aa13.26□□□□□ -0.29
CCL3-205ENST00000613928 PDIA6Q15084 440 aa13.25□□□□□ -0.29
CCL3-205ENST00000613928 CHMP7Q8WUX9 453 aaPredicted RBP13.23□□□□□ -0.29
CCL3-205ENST00000613928 MAP3K9P80192 1104 aa13.22□□□□□ -0.29
CCL3-205ENST00000613928 MAGI1Q96QZ7 1491 aaPredicted RBP13.22□□□□□ -0.29
CCL3-205ENST00000613928 PBRM1Q86U86 1689 aa13.21□□□□□ -0.3
CCL3-205ENST00000613928 CARMIL1Q5VZK9 1371 aa13.2□□□□□ -0.3
CCL3-205ENST00000613928 OXER1Q8TDS5 423 aa13.2□□□□□ -0.3
CCL3-205ENST00000613928 GRIN2BQ13224 1484 aa13.19□□□□□ -0.3
CCL3-205ENST00000613928 GAPVD1Q14C86 1478 aa13.19□□□□□ -0.3
CCL3-205ENST00000613928 UPF1Q92900 1129 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCL3-205ENST00000613928 ABCA5Q8WWZ7 1642 aa13.19□□□□□ -0.3
CCL3-205ENST00000613928 CLIP1P30622 1438 aa13.19□□□□□ -0.3
CCL3-205ENST00000613928 SYNJ2O15056 1496 aa13.18□□□□□ -0.3
CCL3-205ENST00000613928 TBC1D12O60347 775 aa13.16□□□□□ -0.3
CCL3-205ENST00000613928 SLC34A2O95436 690 aa13.16□□□□□ -0.3
CCL3-205ENST00000613928 MAMSTRQ6ZN01 415 aa13.15□□□□□ -0.3
CCL3-205ENST00000613928 PTCD2Q8WV60 388 aaKnown RBP13.15□□□□□ -0.3
CCL3-205ENST00000613928 PCGF6Q9BYE7 350 aa13.15□□□□□ -0.3
CCL3-205ENST00000613928 ZNF316A6NFI3 1004 aaPredicted RBP13.14□□□□□ -0.31
CCL3-205ENST00000613928 MLLT3P42568 568 aaPredicted RBP13.14□□□□□ -0.31
CCL3-205ENST00000613928 CUL7Q14999 1698 aa13.14□□□□□ -0.31
CCL3-205ENST00000613928 TRIM26Q12899 539 aaPredicted RBP13.13□□□□□ -0.31
CCL3-205ENST00000613928 SCUBE2Q9NQ36 999 aa13.13□□□□□ -0.31
CCL3-205ENST00000613928 ERCC6L2Q5T890 1561 aa13.12□□□□□ -0.31
CCL3-205ENST00000613928 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
CCL3-205ENST00000613928 POTEB2H3BUK9 544 aa13.11□□□□□ -0.31
CCL3-205ENST00000613928 RANGAP1P46060 587 aaPredicted RBP13.1□□□□□ -0.31
CCL3-205ENST00000613928 PPARGC1BQ86YN6 1023 aaKnown RBP13.09□□□□□ -0.31
CCL3-205ENST00000613928 VPS8Q8N3P4 1428 aa13.09□□□□□ -0.31
CCL3-205ENST00000613928 EVI5O60447 810 aa13.08□□□□□ -0.32
CCL3-205ENST00000613928 SLAIN1Q8ND83 568 aa13.07□□□□□ -0.32
CCL3-205ENST00000613928 ARHGAP35Q9NRY4 1499 aa13.06□□□□□ -0.32
CCL3-205ENST00000613928 PTGER2P43116 358 aa13.06□□□□□ -0.32
CCL3-205ENST00000613928 KIF13AQ9H1H9 1805 aa13.06□□□□□ -0.32
CCL3-205ENST00000613928 ZC3H15Q8WU90 426 aaKnown RBP13.05□□□□□ -0.32
CCL3-205ENST00000613928 CEP170Q5SW79 1584 aa13.05□□□□□ -0.32
CCL3-205ENST00000613928 GRXCR2A6NFK2 248 aa13.04□□□□□ -0.32
CCL3-205ENST00000613928 GRIN2AQ12879 1464 aa13.04□□□□□ -0.32
CCL3-205ENST00000613928 DOK7Q18PE1 504 aa13.03□□□□□ -0.32
CCL3-205ENST00000613928 RBM26Q5T8P6 1007 aaKnown RBP13.03□□□□□ -0.32
CCL3-205ENST00000613928 GPIHBP1Q8IV16 184 aa13.03□□□□□ -0.32
CCL3-205ENST00000613928 ADAMTS12P58397 1594 aa13.03□□□□□ -0.32
CCL3-205ENST00000613928 PCDHGA4Q9Y5G9 962 aa13.02□□□□□ -0.33
CCL3-205ENST00000613928 ANO8Q9HCE9 1232 aaPredicted RBP13.01□□□□□ -0.33
CCL3-205ENST00000613928 FHAD1B1AJZ9 1412 aa13.01□□□□□ -0.33
CCL3-205ENST00000613928 CTTNBP2Q8WZ74 1663 aa13.01□□□□□ -0.33
CCL3-205ENST00000613928 RIMBP2O15034 1052 aa13□□□□□ -0.33
CCL3-205ENST00000613928 DDX12PQ92771 950 aa13□□□□□ -0.33
CCL3-205ENST00000613928 SHROOM2Q13796 1616 aa12.99□□□□□ -0.33
CCL3-205ENST00000613928 NUP160Q12769 1436 aa12.98□□□□□ -0.33
CCL3-205ENST00000613928 ZSWIM6Q9HCJ5 1215 aa12.97□□□□□ -0.33
CCL3-205ENST00000613928 ZMYND10O75800 440 aa12.96□□□□□ -0.33
CCL3-205ENST00000613928 OSBPP22059 807 aa12.96□□□□□ -0.33
CCL3-205ENST00000613928 HOXB3P14651 431 aaPredicted RBP12.95□□□□□ -0.34
CCL3-205ENST00000613928 TTBK1Q5TCY1 1321 aaPredicted RBP12.94□□□□□ -0.34
CCL3-205ENST00000613928 EFCAB5A4FU69 1503 aa12.93□□□□□ -0.34
CCL3-205ENST00000613928 SNPHO15079 494 aa12.93□□□□□ -0.34
CCL3-205ENST00000613928 ZNF710Q8N1W2 664 aa12.93□□□□□ -0.34
CCL3-205ENST00000613928 PHF14O94880 888 aa12.92□□□□□ -0.34
CCL3-205ENST00000613928 EPAS1Q99814 870 aa12.92□□□□□ -0.34
CCL3-205ENST00000613928 NUTM2FA1L443 756 aa12.91□□□□□ -0.34
CCL3-205ENST00000613928 SAMD9Q5K651 1589 aa12.9□□□□□ -0.34
CCL3-205ENST00000613928 FHOD3Q2V2M9 1422 aa12.9□□□□□ -0.34
CCL3-205ENST00000613928 KDM4FA0A1W2PPD8 638 aa12.9□□□□□ -0.34
CCL3-205ENST00000613928 BARGINQ6ZT62 677 aa12.9□□□□□ -0.34
CCL3-205ENST00000613928 PRG4Q92954 1404 aaPredicted RBP12.89□□□□□ -0.35
CCL3-205ENST00000613928 JPH4Q96JJ6 628 aa12.89□□□□□ -0.35
CCL3-205ENST00000613928 ARSIQ5FYB1 569 aa12.88□□□□□ -0.35
CCL3-205ENST00000613928 DIP2BQ9P265 1576 aa12.87□□□□□ -0.35
CCL3-205ENST00000613928 ABCC10Q5T3U5 1492 aa12.87□□□□□ -0.35
CCL3-205ENST00000613928 NUDT7P0C024 238 aa12.87□□□□□ -0.35
CCL3-205ENST00000613928 FAM69CQ0P6D2 419 aa12.87□□□□□ -0.35
CCL3-205ENST00000613928 TYW1BQ6NUM6 668 aa12.87□□□□□ -0.35
CCL3-205ENST00000613928 GPR153Q6NV75 609 aa12.87□□□□□ -0.35
CCL3-205ENST00000613928 TSPOAP1O95153 1857 aa12.87□□□□□ -0.35
CCL3-205ENST00000613928 IQGAP2Q13576 1575 aa12.86□□□□□ -0.35
CCL3-205ENST00000613928 EN1Q05925 392 aaPredicted RBP12.86□□□□□ -0.35
CCL3-205ENST00000613928 KANK4Q5T7N3 995 aaPredicted RBP12.86□□□□□ -0.35
CCL3-205ENST00000613928 FBXW7Q969H0 707 aa12.86□□□□□ -0.35
CCL3-205ENST00000613928 SLC24A3Q9HC58 644 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms