RNA–Protein interactions for RNA: ENST00000599814.5

SYMPK-214, Transcript of symplekin, humanhuman

TSL 2 BASIC

Gene SYMPK, Length 6,537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-214ENST00000599814 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.3■□□□□ 0.2
SYMPK-214ENST00000599814 ESCO1Q5FWF5 840 aa16.3■□□□□ 0.2
SYMPK-214ENST00000599814 TRAK1Q9UPV9 953 aa16.3■□□□□ 0.2
SYMPK-214ENST00000599814 HTATSF1O43719 755 aaKnown RBP16.3■□□□□ 0.2
SYMPK-214ENST00000599814 RBM33Q96EV2 1170 aaKnown RBP16.3■□□□□ 0.2
SYMPK-214ENST00000599814 KIAA1211Q6ZU35 1233 aa16.29■□□□□ 0.2
SYMPK-214ENST00000599814 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
SYMPK-214ENST00000599814 EEA1Q15075 1411 aa16.29■□□□□ 0.2
SYMPK-214ENST00000599814 NOL10Q9BSC4 688 aaKnown RBP16.28■□□□□ 0.2
SYMPK-214ENST00000599814 UBAP1LF5GYI3 381 aa16.28■□□□□ 0.2
SYMPK-214ENST00000599814 NUTM2GQ5VZR2 741 aa16.28■□□□□ 0.2
SYMPK-214ENST00000599814 MARCH6O60337 910 aa16.28■□□□□ 0.2
SYMPK-214ENST00000599814 NUP155O75694 1391 aa16.28■□□□□ 0.2
SYMPK-214ENST00000599814 HSP90B1P14625 803 aaKnown RBP16.28■□□□□ 0.2
SYMPK-214ENST00000599814 DMRT2Q9Y5R5 561 aa16.27■□□□□ 0.2
SYMPK-214ENST00000599814 TXNDC2Q86VQ3 553 aa16.27■□□□□ 0.19
SYMPK-214ENST00000599814 GOLGA6L3A6NEY3 463 aa16.27■□□□□ 0.19
SYMPK-214ENST00000599814 TOMM22Q9NS69 142 aa16.26■□□□□ 0.19
SYMPK-214ENST00000599814 NLRP2Q9NX02 1062 aa16.26■□□□□ 0.19
SYMPK-214ENST00000599814 RASSF8Q8NHQ8 419 aa16.26■□□□□ 0.19
SYMPK-214ENST00000599814 A0A0U1RQG5 324 aaPredicted RBP16.25■□□□□ 0.19
SYMPK-214ENST00000599814 GZF1Q9H116 711 aaPredicted RBP16.24■□□□□ 0.19
SYMPK-214ENST00000599814 ANKRD30AQ9BXX3 1397 aa16.24■□□□□ 0.19
SYMPK-214ENST00000599814 STK31Q9BXU1 1019 aa16.24■□□□□ 0.19
SYMPK-214ENST00000599814 VPS37DQ86XT2 251 aa16.24■□□□□ 0.19
SYMPK-214ENST00000599814 ANKLE2Q86XL3 938 aa16.24■□□□□ 0.19
SYMPK-214ENST00000599814 TCEAL9Q9UHQ7 104 aa16.24■□□□□ 0.19
SYMPK-214ENST00000599814 ADAMTS2O95450 1211 aa16.23■□□□□ 0.19
SYMPK-214ENST00000599814 POGZQ7Z3K3 1410 aa16.23■□□□□ 0.19
SYMPK-214ENST00000599814 SETQ01105 290 aaPredicted RBP16.23■□□□□ 0.19
SYMPK-214ENST00000599814 WWC1Q8IX03 1113 aa16.23■□□□□ 0.19
SYMPK-214ENST00000599814 MINK1Q8N4C8 1332 aaPredicted RBP16.23■□□□□ 0.19
SYMPK-214ENST00000599814 U2AF1L5P0DN76 240 aaPredicted RBP16.22■□□□□ 0.19
SYMPK-214ENST00000599814 U2AF1Q01081 240 aaKnown RBP eCLIP16.22■□□□□ 0.19
SYMPK-214ENST00000599814 CREBRFQ8IUR6 639 aa16.22■□□□□ 0.19
SYMPK-214ENST00000599814 C16orf71Q8IYS4 520 aaPredicted RBP16.22■□□□□ 0.19
SYMPK-214ENST00000599814 GPATCH3Q96I76 525 aa16.22■□□□□ 0.19
SYMPK-214ENST00000599814 THEMISQ8N1K5 641 aaPredicted RBP16.22■□□□□ 0.19
SYMPK-214ENST00000599814 CEP162Q5TB80 1403 aa16.21■□□□□ 0.19
SYMPK-214ENST00000599814 VGFO15240 615 aaPredicted RBP16.21■□□□□ 0.18
SYMPK-214ENST00000599814 NGLY1Q96IV0 654 aa16.21■□□□□ 0.18
SYMPK-214ENST00000599814 RAPGEF4Q8WZA2 1011 aa16.2■□□□□ 0.18
SYMPK-214ENST00000599814 CSPP1Q1MSJ5 1256 aa16.2■□□□□ 0.18
SYMPK-214ENST00000599814 COG3Q96JB2 828 aa16.2■□□□□ 0.18
SYMPK-214ENST00000599814 CHMP4AQ9BY43 222 aa16.2■□□□□ 0.18
SYMPK-214ENST00000599814 CCER2I3L3R5 266 aa16.2■□□□□ 0.18
SYMPK-214ENST00000599814 TEFQ10587 303 aa16.19■□□□□ 0.18
SYMPK-214ENST00000599814 FAM177BA6PVY3 158 aa16.18■□□□□ 0.18
SYMPK-214ENST00000599814 FBXO3Q9UK99 471 aa16.18■□□□□ 0.18
SYMPK-214ENST00000599814 RSPH4AQ5TD94 716 aa16.18■□□□□ 0.18
SYMPK-214ENST00000599814 SLC4A10Q6U841 1118 aa16.18■□□□□ 0.18
SYMPK-214ENST00000599814 TCERG1O14776 1098 aaKnown RBP16.18■□□□□ 0.18
SYMPK-214ENST00000599814 EIF3AQ14152 1382 aaKnown RBP16.17■□□□□ 0.18
SYMPK-214ENST00000599814 IPO8O15397 1037 aaKnown RBP16.17■□□□□ 0.18
SYMPK-214ENST00000599814 CALD1Q05682 793 aaKnown RBP16.17■□□□□ 0.18
SYMPK-214ENST00000599814 RBM42Q9BTD8 480 aaKnown RBP16.17■□□□□ 0.18
SYMPK-214ENST00000599814 SIN3AQ96ST3 1273 aa16.17■□□□□ 0.18
SYMPK-214ENST00000599814 AMOTL1Q8IY63 956 aa16.16■□□□□ 0.18
SYMPK-214ENST00000599814 SLKQ9H2G2 1235 aaPredicted RBP16.16■□□□□ 0.18
SYMPK-214ENST00000599814 ITPRIPQ8IWB1 547 aa16.16■□□□□ 0.18
SYMPK-214ENST00000599814 RWDD1Q9H446 243 aaPredicted RBP16.16■□□□□ 0.18
SYMPK-214ENST00000599814 GRM1Q13255 1194 aa16.15■□□□□ 0.18
SYMPK-214ENST00000599814 TRIM6-TRIM34B2RNG4 842 aa16.15■□□□□ 0.18
SYMPK-214ENST00000599814 GPRASP1Q5JY77 1395 aa16.15■□□□□ 0.18
SYMPK-214ENST00000599814 ROCK2O75116 1388 aaKnown RBP16.15■□□□□ 0.18
SYMPK-214ENST00000599814 CCDC34Q96HJ3 373 aa16.14■□□□□ 0.17
SYMPK-214ENST00000599814 HSP90AA2PQ14568 343 aaPredicted RBP16.14■□□□□ 0.17
SYMPK-214ENST00000599814 PHF14O94880 888 aa16.14■□□□□ 0.17
SYMPK-214ENST00000599814 TOM1L2Q6ZVM7 507 aa16.13■□□□□ 0.17
SYMPK-214ENST00000599814 RSPH6AQ9H0K4 717 aa16.13■□□□□ 0.17
SYMPK-214ENST00000599814 PMFBP1Q8TBY8 1022 aa16.12■□□□□ 0.17
SYMPK-214ENST00000599814 DNAJC5BQ9UF47 199 aa16.12■□□□□ 0.17
SYMPK-214ENST00000599814 TOM1O60784 492 aa16.11■□□□□ 0.17
SYMPK-214ENST00000599814 CEP89Q96ST8 783 aa16.11■□□□□ 0.17
SYMPK-214ENST00000599814 IPO9Q96P70 1041 aaKnown RBP16.11■□□□□ 0.17
SYMPK-214ENST00000599814 AQRO60306 1485 aaKnown RBP eCLIP16.1■□□□□ 0.172e-7■■■■■ 31.4
SYMPK-214ENST00000599814 TPM3P06753 285 aa16.1■□□□□ 0.17
SYMPK-214ENST00000599814 KTN1Q86UP2 1357 aaKnown RBP16.1■□□□□ 0.17
SYMPK-214ENST00000599814 ARHGAP35Q9NRY4 1499 aa16.1■□□□□ 0.17
SYMPK-214ENST00000599814 ABCC8Q09428 1581 aa16.1■□□□□ 0.17
SYMPK-214ENST00000599814 DDX54Q8TDD1 881 aaKnown RBP16.09■□□□□ 0.17
SYMPK-214ENST00000599814 FMN1Q68DA7 1419 aa16.09■□□□□ 0.17
SYMPK-214ENST00000599814 EIF2S2P20042 333 aaKnown RBP16.09■□□□□ 0.17
SYMPK-214ENST00000599814 MFAP1P55081 439 aaKnown RBP16.09■□□□□ 0.17
SYMPK-214ENST00000599814 CCDC18Q5T9S5 1454 aa16.08■□□□□ 0.16
SYMPK-214ENST00000599814 RCAN3Q9UKA8 241 aa16.08■□□□□ 0.16
SYMPK-214ENST00000599814 MYO15BQ96JP2 1530 aa16.07■□□□□ 0.16
SYMPK-214ENST00000599814 ABTB2Q8N961 1025 aa16.07■□□□□ 0.16
SYMPK-214ENST00000599814 PRDM2Q13029 1718 aa16.06■□□□□ 0.16
SYMPK-214ENST00000599814 BCL11BQ9C0K0 894 aaPredicted RBP16.06■□□□□ 0.16
SYMPK-214ENST00000599814 CCDC88BA6NC98 1476 aa16.05■□□□□ 0.16
SYMPK-214ENST00000599814 DDX11L8A8MPP1 907 aa16.05■□□□□ 0.16
SYMPK-214ENST00000599814 SLC4A3P48751 1232 aa16.05■□□□□ 0.16
SYMPK-214ENST00000599814 WDHD1O75717 1129 aaPredicted RBP16.05■□□□□ 0.16
SYMPK-214ENST00000599814 CALRP27797 417 aaKnown RBP16.05■□□□□ 0.16
SYMPK-214ENST00000599814 HDAC5Q9UQL6 1122 aa16.05■□□□□ 0.16
SYMPK-214ENST00000599814 DHX16O60231 1041 aaKnown RBP16.05■□□□□ 0.16
SYMPK-214ENST00000599814 XPCQ01831 940 aaPredicted RBP16.05■□□□□ 0.16
SYMPK-214ENST00000599814 TTLL12Q14166 644 aaPredicted RBP16.04■□□□□ 0.16
SYMPK-214ENST00000599814 NOL8Q76FK4 1167 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms