RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 MAPKBP1O60336 1514 aa10.17□□□□□ -0.78
ZNF554-202ENST00000588534 SYCP2Q9BX26 1530 aa10.17□□□□□ -0.78
ZNF554-202ENST00000588534 C14orf37Q86TY3 774 aa10.17□□□□□ -0.78
ZNF554-202ENST00000588534 ARAP3Q8WWN8 1544 aa10.17□□□□□ -0.78
ZNF554-202ENST00000588534 YTHDC1Q96MU7 727 aaKnown RBP10.17□□□□□ -0.78
ZNF554-202ENST00000588534 NCBP3Q53F19 620 aaKnown RBP10.16□□□□□ -0.78
ZNF554-202ENST00000588534 DNAJC5Q9H3Z4 198 aa10.16□□□□□ -0.78
ZNF554-202ENST00000588534 A2MP01023 1474 aa10.16□□□□□ -0.78
ZNF554-202ENST00000588534 ADGRL2O95490 1459 aa10.16□□□□□ -0.78
ZNF554-202ENST00000588534 TRAPPC8Q9Y2L5 1435 aa10.15□□□□□ -0.79
ZNF554-202ENST00000588534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.15□□□□□ -0.79
ZNF554-202ENST00000588534 ZCCHC11Q5TAX3 1644 aaKnown RBP10.14□□□□□ -0.79
ZNF554-202ENST00000588534 KNSTRNQ9Y448 316 aa10.14□□□□□ -0.79
ZNF554-202ENST00000588534 ARHGEF5Q12774 1597 aa10.14□□□□□ -0.79
ZNF554-202ENST00000588534 ERCC6L2Q5T890 1561 aa10.14□□□□□ -0.79
ZNF554-202ENST00000588534 DNMT1P26358 1616 aaKnown RBP10.14□□□□□ -0.79
ZNF554-202ENST00000588534 THEMISQ8N1K5 641 aaPredicted RBP10.13□□□□□ -0.79
ZNF554-202ENST00000588534 MAGI3Q5TCQ9 1506 aa10.13□□□□□ -0.79
ZNF554-202ENST00000588534 ANKRD30BQ9BXX2 1392 aa10.13□□□□□ -0.79
ZNF554-202ENST00000588534 HSPA5P11021 654 aaKnown RBP10.13□□□□□ -0.79
ZNF554-202ENST00000588534 TMC1Q8TDI8 760 aa10.13□□□□□ -0.79
ZNF554-202ENST00000588534 MAGI2Q86UL8 1455 aa10.11□□□□□ -0.79
ZNF554-202ENST00000588534 MYO5CQ9NQX4 1742 aa10.11□□□□□ -0.79
ZNF554-202ENST00000588534 PTPRKQ15262 1439 aa10.11□□□□□ -0.79
ZNF554-202ENST00000588534 ADCY10Q96PN6 1610 aa10.1□□□□□ -0.79
ZNF554-202ENST00000588534 ATP10AO60312 1499 aa10.09□□□□□ -0.79
ZNF554-202ENST00000588534 CFAP53Q96M91 514 aa10.08□□□□□ -0.8
ZNF554-202ENST00000588534 CNTLNQ9NXG0 1405 aa10.08□□□□□ -0.8
ZNF554-202ENST00000588534 ATP7AQ04656 1500 aa10.08□□□□□ -0.8
ZNF554-202ENST00000588534 SRPK2P78362 688 aaKnown RBP10.08□□□□□ -0.8
ZNF554-202ENST00000588534 MBD5Q9P267 1494 aa10.08□□□□□ -0.8
ZNF554-202ENST00000588534 HIRIP3Q9BW71 556 aaPredicted RBP10.08□□□□□ -0.8
ZNF554-202ENST00000588534 HDGFL2Q7Z4V5 671 aaPredicted RBP10.07□□□□□ -0.8
ZNF554-202ENST00000588534 PREX2Q70Z35 1606 aa10.07□□□□□ -0.8
ZNF554-202ENST00000588534 STK26Q9P289 416 aa10.07□□□□□ -0.8
ZNF554-202ENST00000588534 MLH3Q9UHC1 1453 aa10.07□□□□□ -0.8
ZNF554-202ENST00000588534 WDR43Q15061 677 aaKnown RBP eCLIP10.06□□□□□ -0.8
ZNF554-202ENST00000588534 TERF2IPQ9NYB0 399 aa10.05□□□□□ -0.8
ZNF554-202ENST00000588534 ABCC1P33527 1531 aa10.05□□□□□ -0.8
ZNF554-202ENST00000588534 RIMBP3CA6NJZ7 1639 aa10.05□□□□□ -0.8
ZNF554-202ENST00000588534 RIMBP3BA6NNM3 1639 aa10.05□□□□□ -0.8
ZNF554-202ENST00000588534 RIMBP3Q9UFD9 1639 aa10.05□□□□□ -0.8
ZNF554-202ENST00000588534 EVC2Q86UK5 1308 aa10.05□□□□□ -0.8
ZNF554-202ENST00000588534 USP47Q96K76 1375 aa10.05□□□□□ -0.8
ZNF554-202ENST00000588534 MRS2Q9HD23 443 aa10.04□□□□□ -0.8
ZNF554-202ENST00000588534 TTC37Q6PGP7 1564 aa10.04□□□□□ -0.8
ZNF554-202ENST00000588534 TXNDC2Q86VQ3 553 aa10.04□□□□□ -0.8
ZNF554-202ENST00000588534 ANKLE2Q86XL3 938 aa10.03□□□□□ -0.8
ZNF554-202ENST00000588534 SENP3Q9H4L4 574 aaPredicted RBP10.03□□□□□ -0.8
ZNF554-202ENST00000588534 RPRD2Q5VT52 1461 aaKnown RBP10.03□□□□□ -0.8
ZNF554-202ENST00000588534 ZFYVE16Q7Z3T8 1539 aa10.03□□□□□ -0.8
ZNF554-202ENST00000588534 TRAK1Q9UPV9 953 aa10.03□□□□□ -0.8
ZNF554-202ENST00000588534 ABCA9Q8IUA7 1624 aa10.02□□□□□ -0.8
ZNF554-202ENST00000588534 KCNA4P22459 653 aa10.02□□□□□ -0.8
ZNF554-202ENST00000588534 ST20-MTHFSA0A0A6YYL1 179 aa10.02□□□□□ -0.81
ZNF554-202ENST00000588534 CENPJQ9HC77 1338 aaPredicted RBP10.02□□□□□ -0.81
ZNF554-202ENST00000588534 SAMD9LQ8IVG5 1584 aa10.02□□□□□ -0.81
ZNF554-202ENST00000588534 NUDCQ9Y266 331 aa10.02□□□□□ -0.81
ZNF554-202ENST00000588534 FAM135AQ9P2D6 1515 aa10.01□□□□□ -0.81
ZNF554-202ENST00000588534 RALBP1Q15311 655 aa10.01□□□□□ -0.81
ZNF554-202ENST00000588534 PNNQ9H307 717 aaKnown RBP10.01□□□□□ -0.81
ZNF554-202ENST00000588534 TNRQ92752 1358 aa10.01□□□□□ -0.81
ZNF554-202ENST00000588534 NUTM2DQ5VT03 806 aaPredicted RBP10.01□□□□□ -0.81
ZNF554-202ENST00000588534 CCER2I3L3R5 266 aa10□□□□□ -0.81
ZNF554-202ENST00000588534 ADGBQ8N7X0 1667 aa10□□□□□ -0.81
ZNF554-202ENST00000588534 KTN1Q86UP2 1357 aaKnown RBP9.99□□□□□ -0.81
ZNF554-202ENST00000588534 IDI1Q13907 227 aa9.99□□□□□ -0.81
ZNF554-202ENST00000588534 SAFB2Q14151 953 aaKnown RBP eCLIP9.99□□□□□ -0.81
ZNF554-202ENST00000588534 AMER1Q5JTC6 1135 aaPredicted RBP9.99□□□□□ -0.81
ZNF554-202ENST00000588534 GLI2P10070 1586 aa9.99□□□□□ -0.81
ZNF554-202ENST00000588534 MAST1Q9Y2H9 1570 aa9.99□□□□□ -0.81
ZNF554-202ENST00000588534 CFAP70Q5T0N1 1121 aa9.97□□□□□ -0.81
ZNF554-202ENST00000588534 MORC1Q86VD1 984 aa9.97□□□□□ -0.81
ZNF554-202ENST00000588534 TULP1O00294 542 aaPredicted RBP9.97□□□□□ -0.81
ZNF554-202ENST00000588534 FAM9BQ8IZU0 186 aa9.97□□□□□ -0.81
ZNF554-202ENST00000588534 HAP1P54257 671 aaPredicted RBP9.96□□□□□ -0.81
ZNF554-202ENST00000588534 MIER1Q8N108 512 aa9.96□□□□□ -0.81
ZNF554-202ENST00000588534 GCC2Q8IWJ2 1684 aa9.96□□□□□ -0.81
ZNF554-202ENST00000588534 HECW2Q9P2P5 1572 aa9.96□□□□□ -0.82
ZNF554-202ENST00000588534 ZMYM3Q14202 1370 aa9.96□□□□□ -0.82
ZNF554-202ENST00000588534 CDC42BPAQ5VT25 1732 aa9.96□□□□□ -0.82
ZNF554-202ENST00000588534 AEBP2Q6ZN18 517 aaPredicted RBP9.95□□□□□ -0.82
ZNF554-202ENST00000588534 PLXNC1O60486 1568 aa9.95□□□□□ -0.82
ZNF554-202ENST00000588534 PZPP20742 1482 aa9.95□□□□□ -0.82
ZNF554-202ENST00000588534 HNRNPUQ00839 825 aaKnown RBP eCLIP9.95□□□□□ -0.82
ZNF554-202ENST00000588534 FBXO31Q5XUX0 539 aaPredicted RBP9.95□□□□□ -0.82
ZNF554-202ENST00000588534 NGDNQ8NEJ9 315 aaKnown RBP9.94□□□□□ -0.82
ZNF554-202ENST00000588534 DMRT2Q9Y5R5 561 aa9.94□□□□□ -0.82
ZNF554-202ENST00000588534 WASHC2AQ641Q2 1341 aa9.93□□□□□ -0.82
ZNF554-202ENST00000588534 NBPF8Q3BBV2 869 aa9.93□□□□□ -0.82
ZNF554-202ENST00000588534 KDM5DQ9BY66 1539 aa9.93□□□□□ -0.82
ZNF554-202ENST00000588534 CGNL1Q0VF96 1302 aa9.92□□□□□ -0.82
ZNF554-202ENST00000588534 ARHGEF12Q9NZN5 1544 aa9.92□□□□□ -0.82
ZNF554-202ENST00000588534 C14orf93Q9H972 538 aaKnown RBP9.92□□□□□ -0.82
ZNF554-202ENST00000588534 YEATS2Q9ULM3 1422 aa9.92□□□□□ -0.82
ZNF554-202ENST00000588534 CC2D1BQ5T0F9 858 aaKnown RBP9.92□□□□□ -0.82
ZNF554-202ENST00000588534 CCDC7Q96M83 1385 aa9.92□□□□□ -0.82
ZNF554-202ENST00000588534 MINK1Q8N4C8 1332 aaPredicted RBP9.92□□□□□ -0.82
ZNF554-202ENST00000588534 TMEM132EQ6IEE7 984 aa9.91□□□□□ -0.82
ZNF554-202ENST00000588534 LMOD2Q6P5Q4 547 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms