RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 SPAG9O60271 1321 aaKnown RBP15.48■□□□□ 0.07
PCDHGA9-201ENST00000573521 CASKIN1Q8WXD9 1431 aa15.48■□□□□ 0.07
PCDHGA9-201ENST00000573521 ST18O60284 1047 aa15.48■□□□□ 0.07
PCDHGA9-201ENST00000573521 KIF3AQ9Y496 699 aa15.48■□□□□ 0.07
PCDHGA9-201ENST00000573521 PDE4AP27815 886 aa15.48■□□□□ 0.07
PCDHGA9-201ENST00000573521 GPATCH3Q96I76 525 aa15.48■□□□□ 0.07
PCDHGA9-201ENST00000573521 FGD5Q6ZNL6 1462 aa15.47■□□□□ 0.07
PCDHGA9-201ENST00000573521 BRD4O60885 1362 aaPredicted RBP15.47■□□□□ 0.07
PCDHGA9-201ENST00000573521 TPM4P67936 248 aa15.47■□□□□ 0.07
PCDHGA9-201ENST00000573521 LRRC9Q6ZRR7 1453 aa15.47■□□□□ 0.07
PCDHGA9-201ENST00000573521 MRC2Q9UBG0 1479 aa15.46■□□□□ 0.07
PCDHGA9-201ENST00000573521 ITPRIPQ8IWB1 547 aa15.46■□□□□ 0.07
PCDHGA9-201ENST00000573521 LAMC3Q9Y6N6 1575 aa15.46■□□□□ 0.07
PCDHGA9-201ENST00000573521 EFCAB5A4FU69 1503 aa15.46■□□□□ 0.06
PCDHGA9-201ENST00000573521 ATP6V1DQ9Y5K8 247 aa15.45■□□□□ 0.06
PCDHGA9-201ENST00000573521 STK31Q9BXU1 1019 aa15.45■□□□□ 0.06
PCDHGA9-201ENST00000573521 SMC4Q9NTJ3 1288 aa15.45■□□□□ 0.06
PCDHGA9-201ENST00000573521 IGF1RP08069 1367 aa15.45■□□□□ 0.06
PCDHGA9-201ENST00000573521 CCDC7Q96M83 1385 aa15.45■□□□□ 0.06
PCDHGA9-201ENST00000573521 GSE1Q14687 1217 aa15.44■□□□□ 0.06
PCDHGA9-201ENST00000573521 PLCB2Q00722 1185 aa15.43■□□□□ 0.06
PCDHGA9-201ENST00000573521 ZKSCAN2Q63HK3 967 aa15.41■□□□□ 0.06
PCDHGA9-201ENST00000573521 ROCK1Q13464 1354 aa15.41■□□□□ 0.06
PCDHGA9-201ENST00000573521 GAPVD1Q14C86 1478 aa15.41■□□□□ 0.06
PCDHGA9-201ENST00000573521 DRC7Q8IY82 874 aa15.39■□□□□ 0.05
PCDHGA9-201ENST00000573521 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
PCDHGA9-201ENST00000573521 NESP48681 1621 aa15.39■□□□□ 0.05
PCDHGA9-201ENST00000573521 ST20-MTHFSA0A0A6YYL1 179 aa15.39■□□□□ 0.05
PCDHGA9-201ENST00000573521 DDX19BQ9UMR2 479 aa15.39■□□□□ 0.05
PCDHGA9-201ENST00000573521 NINLQ9Y2I6 1382 aa15.39■□□□□ 0.05
PCDHGA9-201ENST00000573521 RTN4Q9NQC3 1192 aaKnown RBP15.39■□□□□ 0.05
PCDHGA9-201ENST00000573521 SCAPERQ9BY12 1400 aa15.38■□□□□ 0.05
PCDHGA9-201ENST00000573521 FOXD1Q16676 465 aa15.38■□□□□ 0.05
PCDHGA9-201ENST00000573521 ISY1Q9ULR0 285 aaKnown RBP15.37■□□□□ 0.05
PCDHGA9-201ENST00000573521 SLKQ9H2G2 1235 aaPredicted RBP15.37■□□□□ 0.05
PCDHGA9-201ENST00000573521 IFT140Q96RY7 1462 aa15.37■□□□□ 0.05
PCDHGA9-201ENST00000573521 VGFO15240 615 aaPredicted RBP15.36■□□□□ 0.05
PCDHGA9-201ENST00000573521 CHMP5Q9NZZ3 219 aa15.36■□□□□ 0.05
PCDHGA9-201ENST00000573521 EVC2Q86UK5 1308 aa15.36■□□□□ 0.05
PCDHGA9-201ENST00000573521 JPH4Q96JJ6 628 aa15.36■□□□□ 0.05
PCDHGA9-201ENST00000573521 HFM1A2PYH4 1435 aa15.35■□□□□ 0.05
PCDHGA9-201ENST00000573521 MFAP1P55081 439 aaKnown RBP15.35■□□□□ 0.05
PCDHGA9-201ENST00000573521 PANK3Q9H999 370 aa15.35■□□□□ 0.05
PCDHGA9-201ENST00000573521 REC8O95072 547 aa15.35■□□□□ 0.05
PCDHGA9-201ENST00000573521 API5Q9BZZ5 524 aaKnown RBP15.34■□□□□ 0.05
PCDHGA9-201ENST00000573521 KIF16BQ96L93 1317 aa15.33■□□□□ 0.05
PCDHGA9-201ENST00000573521 TOPBP1Q92547 1522 aa15.33■□□□□ 0.04
PCDHGA9-201ENST00000573521 PRXQ9BXM0 1461 aa15.32■□□□□ 0.04
PCDHGA9-201ENST00000573521 RAD54L2Q9Y4B4 1467 aa15.32■□□□□ 0.04
PCDHGA9-201ENST00000573521 ZBTB7CA1YPR0 619 aa15.32■□□□□ 0.04
PCDHGA9-201ENST00000573521 KIF3BO15066 747 aa15.32■□□□□ 0.04
PCDHGA9-201ENST00000573521 MAP3K1Q13233 1512 aa15.32■□□□□ 0.04
PCDHGA9-201ENST00000573521 DNMBPQ6XZF7 1577 aa15.32■□□□□ 0.04
PCDHGA9-201ENST00000573521 NUCB2P80303 420 aa15.31■□□□□ 0.04
PCDHGA9-201ENST00000573521 GRIN2BQ13224 1484 aa15.31■□□□□ 0.04
PCDHGA9-201ENST00000573521 MTERF4Q7Z6M4 381 aaKnown RBP15.31■□□□□ 0.04
PCDHGA9-201ENST00000573521 EHBP1L1Q8N3D4 1523 aa15.31■□□□□ 0.04
PCDHGA9-201ENST00000573521 LRRFIP1Q32MZ4 808 aaKnown RBP15.3■□□□□ 0.04
PCDHGA9-201ENST00000573521 GGT6Q6P531 493 aa15.3■□□□□ 0.04
PCDHGA9-201ENST00000573521 OSCARQ8IYS5 282 aa15.3■□□□□ 0.04
PCDHGA9-201ENST00000573521 KIF7Q2M1P5 1343 aa15.3■□□□□ 0.04
PCDHGA9-201ENST00000573521 CT47B1P0C2W7 299 aaPredicted RBP15.29■□□□□ 0.04
PCDHGA9-201ENST00000573521 PTPRGP23470 1445 aa15.29■□□□□ 0.04
PCDHGA9-201ENST00000573521 HNRNPMP52272 730 aaKnown RBP eCLIP15.29■□□□□ 0.04
PCDHGA9-201ENST00000573521 NCOA2Q15596 1464 aa15.29■□□□□ 0.04
PCDHGA9-201ENST00000573521 GNL2Q13823 731 aaKnown RBP15.29■□□□□ 0.04
PCDHGA9-201ENST00000573521 EXOC6Q8TAG9 804 aa15.29■□□□□ 0.04
PCDHGA9-201ENST00000573521 MAP7D2Q96T17 732 aa15.28■□□□□ 0.04
PCDHGA9-201ENST00000573521 TOP2BQ02880 1626 aa15.28■□□□□ 0.04
PCDHGA9-201ENST00000573521 RUFY2Q8WXA3 655 aa15.28■□□□□ 0.04
PCDHGA9-201ENST00000573521 RUNDC1Q96C34 613 aa15.28■□□□□ 0.04
PCDHGA9-201ENST00000573521 SENP3-EIF4A1A0A087X0R7 540 aa15.28■□□□□ 0.04
PCDHGA9-201ENST00000573521 CRBNQ96SW2 442 aa15.27■□□□□ 0.04
PCDHGA9-201ENST00000573521 ANKRD50Q9ULJ7 1429 aa15.27■□□□□ 0.03
PCDHGA9-201ENST00000573521 HSP90AA2PQ14568 343 aaPredicted RBP15.27■□□□□ 0.03
PCDHGA9-201ENST00000573521 PLEKHH2Q8IVE3 1493 aa15.26■□□□□ 0.03
PCDHGA9-201ENST00000573521 PDE3AQ14432 1141 aa15.25■□□□□ 0.03
PCDHGA9-201ENST00000573521 DDX49Q9Y6V7 483 aaKnown RBP15.25■□□□□ 0.03
PCDHGA9-201ENST00000573521 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.25■□□□□ 0.03
PCDHGA9-201ENST00000573521 DZIP1LQ8IYY4 767 aaKnown RBP15.25■□□□□ 0.03
PCDHGA9-201ENST00000573521 NAP1L2Q9ULW6 460 aaPredicted RBP15.25■□□□□ 0.03
PCDHGA9-201ENST00000573521 TPM3P06753 285 aa15.24■□□□□ 0.03
PCDHGA9-201ENST00000573521 SMG6Q86US8 1419 aaKnown RBP15.24■□□□□ 0.03
PCDHGA9-201ENST00000573521 POLA1P09884 1462 aaPredicted RBP15.24■□□□□ 0.03
PCDHGA9-201ENST00000573521 GZF1Q9H116 711 aaPredicted RBP15.24■□□□□ 0.03
PCDHGA9-201ENST00000573521 SPRYD3Q8NCJ5 442 aa15.23■□□□□ 0.03
PCDHGA9-201ENST00000573521 MRE11P49959 708 aa15.23■□□□□ 0.03
PCDHGA9-201ENST00000573521 HSP90AB4PQ58FF6 505 aa15.23■□□□□ 0.03
PCDHGA9-201ENST00000573521 AQRO60306 1485 aaKnown RBP eCLIP15.23■□□□□ 0.03
PCDHGA9-201ENST00000573521 GOLGA6L1Q8N7Z2 621 aa15.22■□□□□ 0.03
PCDHGA9-201ENST00000573521 EID1Q9Y6B2 187 aa15.22■□□□□ 0.03
PCDHGA9-201ENST00000573521 TRIM6-TRIM34B2RNG4 842 aa15.21■□□□□ 0.03
PCDHGA9-201ENST00000573521 PLPPR3Q6T4P5 718 aa15.21■□□□□ 0.03
PCDHGA9-201ENST00000573521 MCM2P49736 904 aa15.21■□□□□ 0.03
PCDHGA9-201ENST00000573521 WWC1Q8IX03 1113 aa15.21■□□□□ 0.03
PCDHGA9-201ENST00000573521 CLUAP1Q96AJ1 413 aa15.21■□□□□ 0.03
PCDHGA9-201ENST00000573521 TIAM1Q13009 1591 aa15.21■□□□□ 0.02
PCDHGA9-201ENST00000573521 GNAI1P63096 354 aa15.21■□□□□ 0.02
PCDHGA9-201ENST00000573521 DHX8Q14562 1220 aaKnown RBP15.21■□□□□ 0.02
PCDHGA9-201ENST00000573521 STK26Q9P289 416 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms