RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 CCDC144AA2RUR9 1427 aa15.26■□□□□ 0.03
RPAIN-212ENST00000573126 ERICH6BQ5W0A0 696 aa15.25■□□□□ 0.03
RPAIN-212ENST00000573126 B4GALNT3Q6L9W6 998 aa15.25■□□□□ 0.03
RPAIN-212ENST00000573126 TMC1Q8TDI8 760 aa15.25■□□□□ 0.03
RPAIN-212ENST00000573126 TTC37Q6PGP7 1564 aa15.25■□□□□ 0.03
RPAIN-212ENST00000573126 PNISRQ8TF01 805 aaKnown RBP15.23■□□□□ 0.03
RPAIN-212ENST00000573126 NBPF1Q3BBV0 1214 aa15.23■□□□□ 0.03
RPAIN-212ENST00000573126 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.23■□□□□ 0.03
RPAIN-212ENST00000573126 CHD1O14646 1710 aa15.22■□□□□ 0.03
RPAIN-212ENST00000573126 ERCC6L2Q5T890 1561 aa15.22■□□□□ 0.03
RPAIN-212ENST00000573126 PRAG1Q86YV5 1406 aa15.2■□□□□ 0.02
RPAIN-212ENST00000573126 PLA2R1Q13018 1463 aa15.2■□□□□ 0.02
RPAIN-212ENST00000573126 PLEKHH2Q8IVE3 1493 aa15.2■□□□□ 0.02
RPAIN-212ENST00000573126 SMG6Q86US8 1419 aaKnown RBP15.2■□□□□ 0.02
RPAIN-212ENST00000573126 NUDCQ9Y266 331 aa15.19■□□□□ 0.02
RPAIN-212ENST00000573126 MYBBP1AQ9BQG0 1328 aaKnown RBP15.17■□□□□ 0.02
RPAIN-212ENST00000573126 ABCC2Q92887 1545 aa15.17■□□□□ 0.02
RPAIN-212ENST00000573126 A2MP01023 1474 aa15.16■□□□□ 0.02
RPAIN-212ENST00000573126 SHROOM2Q13796 1616 aa15.15■□□□□ 0.02
RPAIN-212ENST00000573126 RALBP1Q15311 655 aa15.15■□□□□ 0.02
RPAIN-212ENST00000573126 MSH5O43196 834 aa15.15■□□□□ 0.02
RPAIN-212ENST00000573126 UNC13BO14795 1591 aa15.14■□□□□ 0.01
RPAIN-212ENST00000573126 BRD4O60885 1362 aaPredicted RBP15.14■□□□□ 0.01
RPAIN-212ENST00000573126 MAST1Q9Y2H9 1570 aa15.14■□□□□ 0.01
RPAIN-212ENST00000573126 TRPM1Q7Z4N2 1603 aa15.13■□□□□ 0.01
RPAIN-212ENST00000573126 SALL2Q9Y467 1007 aaPredicted RBP15.13■□□□□ 0.01
RPAIN-212ENST00000573126 LRPPRCP42704 1394 aaKnown RBP15.12■□□□□ 0.01
RPAIN-212ENST00000573126 MYO5CQ9NQX4 1742 aa15.12■□□□□ 0.01
RPAIN-212ENST00000573126 EFCAB2Q5VUJ9 269 aa15.12■□□□□ 0.01
RPAIN-212ENST00000573126 GPRASP1Q5JY77 1395 aa15.11■□□□□ 0.01
RPAIN-212ENST00000573126 KTN1Q86UP2 1357 aaKnown RBP15.11■□□□□ 0.01
RPAIN-212ENST00000573126 DISP3Q9P2K9 1392 aa15.11■□□□□ 0.01
RPAIN-212ENST00000573126 PLXNC1O60486 1568 aa15.11■□□□□ 0.01
RPAIN-212ENST00000573126 TESK2Q96S53 571 aa15.11■□□□□ 0.01
RPAIN-212ENST00000573126 PLCH2O75038 1416 aa15.1■□□□□ 0.01
RPAIN-212ENST00000573126 PER1O15534 1290 aaPredicted RBP15.1■□□□□ 0.01
RPAIN-212ENST00000573126 NLRP13Q86W25 1043 aa15.1■□□□□ 0.01
RPAIN-212ENST00000573126 DUOX2Q9NRD8 1548 aa15.1■□□□□ 0.01
RPAIN-212ENST00000573126 CC2D1BQ5T0F9 858 aaKnown RBP15.1■□□□□ 0.01
RPAIN-212ENST00000573126 RNF123Q5XPI4 1314 aa15.1■□□□□ 0.01
RPAIN-212ENST00000573126 FANCIQ9NVI1 1328 aa15.1■□□□□ 0.01
RPAIN-212ENST00000573126 TRAPPC8Q9Y2L5 1435 aa15.1■□□□□ 0.01
RPAIN-212ENST00000573126 IQGAP3Q86VI3 1631 aa15.1■□□□□ 0.01
RPAIN-212ENST00000573126 E9PCH4 1651 aa15.09■□□□□ 0.01
RPAIN-212ENST00000573126 PARD3Q8TEW0 1356 aa15.09■□□□□ 0.01
RPAIN-212ENST00000573126 ERBINQ96RT1 1412 aa15.08■□□□□ 0.01
RPAIN-212ENST00000573126 AFAP1Q8N556 730 aa15.08■□□□□ 0
RPAIN-212ENST00000573126 CCDC136Q96JN2 1154 aa15.08■□□□□ 0
RPAIN-212ENST00000573126 COL17A1Q9UMD9 1497 aaPredicted RBP15.07■□□□□ 0
RPAIN-212ENST00000573126 PANK3Q9H999 370 aa15.07■□□□□ 0
RPAIN-212ENST00000573126 MAGI2Q86UL8 1455 aa15.06■□□□□ 0
RPAIN-212ENST00000573126 PRDM15P57071 1507 aaPredicted RBP15.06■□□□□ 0
RPAIN-212ENST00000573126 ZCCHC11Q5TAX3 1644 aaKnown RBP15.06■□□□□ 0
RPAIN-212ENST00000573126 SPAG9O60271 1321 aaKnown RBP15.05■□□□□ 0
RPAIN-212ENST00000573126 ATP10AO60312 1499 aa15.05■□□□□ -0
RPAIN-212ENST00000573126 TMF1P82094 1093 aa15.05■□□□□ -0
RPAIN-212ENST00000573126 ABCC1P33527 1531 aa15.04■□□□□ -0
RPAIN-212ENST00000573126 EIF2AK4Q9P2K8 1649 aaKnown RBP15.01□□□□□ -0.01
RPAIN-212ENST00000573126 CDCA7LQ96GN5 454 aa15□□□□□ -0.01
RPAIN-212ENST00000573126 UHRF1BP1LA0JNW5 1464 aa15□□□□□ -0.01
RPAIN-212ENST00000573126 LAMC1P11047 1609 aa15□□□□□ -0.01
RPAIN-212ENST00000573126 RRP1P56182 461 aaKnown RBP15□□□□□ -0.01
RPAIN-212ENST00000573126 RCAN3Q9UKA8 241 aa15□□□□□ -0.01
RPAIN-212ENST00000573126 MYT1LQ9UL68 1186 aa15□□□□□ -0.01
RPAIN-212ENST00000573126 WASHC2CQ9Y4E1 1318 aa14.99□□□□□ -0.01
RPAIN-212ENST00000573126 ERICH6Q7L0X2 663 aa14.99□□□□□ -0.01
RPAIN-212ENST00000573126 CLASP1Q7Z460 1538 aa14.99□□□□□ -0.01
RPAIN-212ENST00000573126 EXOC6Q8TAG9 804 aa14.96□□□□□ -0.01
RPAIN-212ENST00000573126 ZFYVE16Q7Z3T8 1539 aa14.96□□□□□ -0.01
RPAIN-212ENST00000573126 KIF3BO15066 747 aa14.95□□□□□ -0.02
RPAIN-212ENST00000573126 RTEL1-TNFRSF6BF6WH68 1400 aa14.95□□□□□ -0.02
RPAIN-212ENST00000573126 PDE3BQ13370 1112 aa14.95□□□□□ -0.02
RPAIN-212ENST00000573126 RNF17Q9BXT8 1623 aaKnown RBP14.94□□□□□ -0.02
RPAIN-212ENST00000573126 KNSTRNQ9Y448 316 aa14.94□□□□□ -0.02
RPAIN-212ENST00000573126 FANCAO15360 1455 aa14.93□□□□□ -0.02
RPAIN-212ENST00000573126 WDR7Q9Y4E6 1490 aa14.93□□□□□ -0.02
RPAIN-212ENST00000573126 TRPM2O94759 1503 aa14.93□□□□□ -0.02
RPAIN-212ENST00000573126 MADDQ8WXG6 1647 aa14.93□□□□□ -0.02
RPAIN-212ENST00000573126 SCAPERQ9BY12 1400 aa14.93□□□□□ -0.02
RPAIN-212ENST00000573126 ADAMTS8Q9UP79 889 aa14.92□□□□□ -0.02
RPAIN-212ENST00000573126 PTPRTO14522 1441 aa14.92□□□□□ -0.02
RPAIN-212ENST00000573126 BLMP54132 1417 aaPredicted RBP14.91□□□□□ -0.02
RPAIN-212ENST00000573126 PLIN1O60240 522 aa14.91□□□□□ -0.02
RPAIN-212ENST00000573126 CLTCL1P53675 1640 aa14.91□□□□□ -0.02
RPAIN-212ENST00000573126 KANK1Q14678 1352 aa14.91□□□□□ -0.02
RPAIN-212ENST00000573126 SCAF11Q99590 1463 aaKnown RBP14.9□□□□□ -0.02
RPAIN-212ENST00000573126 AMER1Q5JTC6 1135 aaPredicted RBP14.9□□□□□ -0.02
RPAIN-212ENST00000573126 ATP7AQ04656 1500 aa14.9□□□□□ -0.02
RPAIN-212ENST00000573126 PPP2R1AP30153 589 aa14.89□□□□□ -0.03
RPAIN-212ENST00000573126 ARAP3Q8WWN8 1544 aa14.89□□□□□ -0.03
RPAIN-212ENST00000573126 ADGRL1O94910 1474 aa14.88□□□□□ -0.03
RPAIN-212ENST00000573126 SPHKAPQ2M3C7 1700 aa14.88□□□□□ -0.03
RPAIN-212ENST00000573126 CDCA8Q53HL2 280 aa14.88□□□□□ -0.03
RPAIN-212ENST00000573126 CFAP70Q5T0N1 1121 aa14.88□□□□□ -0.03
RPAIN-212ENST00000573126 UGGT1Q9NYU2 1555 aa14.87□□□□□ -0.03
RPAIN-212ENST00000573126 WDR43Q15061 677 aaKnown RBP eCLIP14.87□□□□□ -0.03
RPAIN-212ENST00000573126 IQGAP1P46940 1657 aa14.87□□□□□ -0.03
RPAIN-212ENST00000573126 STAC3Q96MF2 364 aa14.86□□□□□ -0.03
RPAIN-212ENST00000573126 DEPDC5O75140 1603 aa14.86□□□□□ -0.03
RPAIN-212ENST00000573126 CEP152O94986 1710 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms