RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 TTLL12Q14166 644 aaPredicted RBP5.33□□□□□ -1.56
CNOT1-221ENST00000569924 HIC1Q14526 733 aa5.33□□□□□ -1.56
CNOT1-221ENST00000569924 MCM6Q14566 821 aa5.33□□□□□ -1.56
CNOT1-221ENST00000569924 KCTD17Q8N5Z5 321 aa5.33□□□□□ -1.56
CNOT1-221ENST00000569924 TARBP1Q13395 1621 aaKnown RBP5.33□□□□□ -1.56
CNOT1-221ENST00000569924 GRXCR2A6NFK2 248 aa5.32□□□□□ -1.56
CNOT1-221ENST00000569924 FCHSD2O94868 740 aa5.32□□□□□ -1.56
CNOT1-221ENST00000569924 PRKAR2AP13861 404 aaKnown RBP5.32□□□□□ -1.56
CNOT1-221ENST00000569924 FOXK1P85037 733 aa5.32□□□□□ -1.56
CNOT1-221ENST00000569924 SP7Q8TDD2 431 aaPredicted RBP5.32□□□□□ -1.56
CNOT1-221ENST00000569924 SERPINA10Q9UK55 444 aa5.32□□□□□ -1.56
CNOT1-221ENST00000569924 ZNF777Q9ULD5 760 aaPredicted RBP5.32□□□□□ -1.56
CNOT1-221ENST00000569924 CHD1O14646 1710 aa5.31□□□□□ -1.56
CNOT1-221ENST00000569924 MS4A1P11836 297 aa5.31□□□□□ -1.56
CNOT1-221ENST00000569924 OSBPP22059 807 aa5.31□□□□□ -1.56
CNOT1-221ENST00000569924 FECHP22830 423 aa5.31□□□□□ -1.56
CNOT1-221ENST00000569924 GIGYF2Q6Y7W6 1299 aaKnown RBP5.31□□□□□ -1.56
CNOT1-221ENST00000569924 PROSER2Q86WR7 435 aaPredicted RBP5.31□□□□□ -1.56
CNOT1-221ENST00000569924 FNBP4Q8N3X1 1017 aaPredicted RBP5.31□□□□□ -1.56
CNOT1-221ENST00000569924 TMEM106CQ9BVX2 250 aa5.31□□□□□ -1.56
CNOT1-221ENST00000569924 AQRO60306 1485 aaKnown RBP eCLIP5.31□□□□□ -1.568e-8■■■□□ 15.2
CNOT1-221ENST00000569924 POLA1P09884 1462 aaPredicted RBP5.31□□□□□ -1.56
CNOT1-221ENST00000569924 WDR97A6NE52 1622 aa5.3□□□□□ -1.56
CNOT1-221ENST00000569924 SH3D19Q5HYK7 790 aa5.3□□□□□ -1.56
CNOT1-221ENST00000569924 CYB5RLQ6IPT4 315 aa5.3□□□□□ -1.56
CNOT1-221ENST00000569924 CCDC97Q96F63 343 aaPredicted RBP5.3□□□□□ -1.56
CNOT1-221ENST00000569924 ARAP1Q96P48 1450 aa5.3□□□□□ -1.56
CNOT1-221ENST00000569924 PTGER2P43116 358 aa5.29□□□□□ -1.56
CNOT1-221ENST00000569924 MAP3K9P80192 1104 aa5.29□□□□□ -1.56
CNOT1-221ENST00000569924 TMC2Q8TDI7 906 aa5.29□□□□□ -1.56
CNOT1-221ENST00000569924 RAD21O60216 631 aa5.28□□□□□ -1.56
CNOT1-221ENST00000569924 SKIV2LQ15477 1246 aaKnown RBP5.28□□□□□ -1.56
CNOT1-221ENST00000569924 OXER1Q8TDS5 423 aa5.28□□□□□ -1.56
CNOT1-221ENST00000569924 REPIN1Q9BWE0 567 aaKnown RBP5.28□□□□□ -1.56
CNOT1-221ENST00000569924 SOGA1O94964 1423 aa5.28□□□□□ -1.56
CNOT1-221ENST00000569924 RAD54L2Q9Y4B4 1467 aa5.27□□□□□ -1.57
CNOT1-221ENST00000569924 FXR2P51116 673 aaKnown RBP eCLIP5.27□□□□□ -1.571e-7■■□□□ 12.3
CNOT1-221ENST00000569924 AEBP1Q8IUX7 1158 aa5.27□□□□□ -1.57
CNOT1-221ENST00000569924 PLPP6Q8IY26 295 aa5.27□□□□□ -1.57
CNOT1-221ENST00000569924 TMUB1Q9BVT8 246 aa5.27□□□□□ -1.57
CNOT1-221ENST00000569924 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.27□□□□□ -1.578e-10■□□□□ 8.2
CNOT1-221ENST00000569924 CLASP1Q7Z460 1538 aa5.27□□□□□ -1.57
CNOT1-221ENST00000569924 TDRD9Q8NDG6 1382 aaKnown RBP5.27□□□□□ -1.57
CNOT1-221ENST00000569924 SNAPC4Q5SXM2 1469 aa5.26□□□□□ -1.57
CNOT1-221ENST00000569924 FGD5Q6ZNL6 1462 aa5.26□□□□□ -1.57
CNOT1-221ENST00000569924 MAGI1Q96QZ7 1491 aaPredicted RBP5.26□□□□□ -1.57
CNOT1-221ENST00000569924 PTGDRQ13258 359 aa5.26□□□□□ -1.57
CNOT1-221ENST00000569924 CHRDL2Q6WN34 429 aa5.26□□□□□ -1.57
CNOT1-221ENST00000569924 POM121Q96HA1 1249 aa5.26□□□□□ -1.57
CNOT1-221ENST00000569924 ZRANB1Q9UGI0 708 aa5.26□□□□□ -1.57
CNOT1-221ENST00000569924 GRIN2BQ13224 1484 aa5.26□□□□□ -1.57
CNOT1-221ENST00000569924 SYNJ1O43426 1573 aa5.25□□□□□ -1.57
CNOT1-221ENST00000569924 CUX1P39880 1505 aa5.25□□□□□ -1.57
CNOT1-221ENST00000569924 CLCN1P35523 988 aa5.25□□□□□ -1.57
CNOT1-221ENST00000569924 MICALL2Q8IY33 904 aa5.25□□□□□ -1.57
CNOT1-221ENST00000569924 RGS22Q8NE09 1264 aa5.25□□□□□ -1.57
CNOT1-221ENST00000569924 PLSCR2Q9NRY7 297 aa5.25□□□□□ -1.57
CNOT1-221ENST00000569924 SYNJ2O15056 1496 aa5.25□□□□□ -1.57
CNOT1-221ENST00000569924 SPDYE5A6NIY4 337 aa5.24□□□□□ -1.57
CNOT1-221ENST00000569924 CHMP7Q8WUX9 453 aaPredicted RBP5.24□□□□□ -1.57
CNOT1-221ENST00000569924 DDX12PQ92771 950 aa5.24□□□□□ -1.57
CNOT1-221ENST00000569924 PHF12Q96QT6 1004 aa5.24□□□□□ -1.57
CNOT1-221ENST00000569924 SSTR3P32745 418 aaPredicted RBP5.23□□□□□ -1.57
CNOT1-221ENST00000569924 TMCO4Q5TGY1 634 aa5.23□□□□□ -1.57
CNOT1-221ENST00000569924 RETREG2Q8NC44 543 aa5.23□□□□□ -1.57
CNOT1-221ENST00000569924 PROCA1Q8NCQ7 364 aaPredicted RBP5.23□□□□□ -1.57
CNOT1-221ENST00000569924 GPCPD1Q9NPB8 672 aa5.23□□□□□ -1.57
CNOT1-221ENST00000569924 TRPC6Q9Y210 931 aa5.23□□□□□ -1.57
CNOT1-221ENST00000569924 COG6Q9Y2V7 657 aa5.23□□□□□ -1.57
CNOT1-221ENST00000569924 C2orf72A6NCS6 295 aa5.22□□□□□ -1.57
CNOT1-221ENST00000569924 KIF3CO14782 793 aa5.22□□□□□ -1.57
CNOT1-221ENST00000569924 PRIM1P49642 420 aaKnown RBP5.22□□□□□ -1.57
CNOT1-221ENST00000569924 DPY19L2Q6NUT2 758 aa5.22□□□□□ -1.57
CNOT1-221ENST00000569924 BANK1Q8NDB2 785 aa5.22□□□□□ -1.57
CNOT1-221ENST00000569924 GZF1Q9H116 711 aaPredicted RBP5.22□□□□□ -1.57
CNOT1-221ENST00000569924 ATP1B4Q9UN42 357 aaPredicted RBP5.22□□□□□ -1.57
CNOT1-221ENST00000569924 MTMR7Q9Y216 660 aa5.22□□□□□ -1.57
CNOT1-221ENST00000569924 ZNF330Q9Y3S2 320 aaPredicted RBP5.22□□□□□ -1.57
CNOT1-221ENST00000569924 ABCA10Q8WWZ4 1543 aa5.22□□□□□ -1.57
CNOT1-221ENST00000569924 PBRM1Q86U86 1689 aa5.21□□□□□ -1.57
CNOT1-221ENST00000569924 GAPVD1Q14C86 1478 aa5.21□□□□□ -1.58
CNOT1-221ENST00000569924 TBC1D12O60347 775 aa5.21□□□□□ -1.58
CNOT1-221ENST00000569924 PPP1R15AO75807 674 aaPredicted RBP5.21□□□□□ -1.58
CNOT1-221ENST00000569924 TIE1P35590 1138 aa5.21□□□□□ -1.58
CNOT1-221ENST00000569924 PDE4CQ08493 712 aa5.21□□□□□ -1.58
CNOT1-221ENST00000569924 IRF5Q13568 498 aa5.21□□□□□ -1.58
CNOT1-221ENST00000569924 BEGAINQ9BUH8 593 aa5.21□□□□□ -1.58
CNOT1-221ENST00000569924 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.21□□□□□ -1.58
CNOT1-221ENST00000569924 ABCA5Q8WWZ7 1642 aa5.21□□□□□ -1.58
CNOT1-221ENST00000569924 ACIN1Q9UKV3 1341 aaKnown RBP5.21□□□□□ -1.58
CNOT1-221ENST00000569924 TTLL13PA6NNM8 815 aa5.2□□□□□ -1.58
CNOT1-221ENST00000569924 CD44P16070 742 aaKnown RBP5.2□□□□□ -1.58
CNOT1-221ENST00000569924 MFAP1P55081 439 aaKnown RBP5.2□□□□□ -1.58
CNOT1-221ENST00000569924 MDM2Q00987 491 aaPredicted RBP5.2□□□□□ -1.58
CNOT1-221ENST00000569924 UPF1Q92900 1129 aaKnown RBP eCLIP5.2□□□□□ -1.58
CNOT1-221ENST00000569924 MS4A3Q96HJ5 214 aa5.2□□□□□ -1.58
CNOT1-221ENST00000569924 TMEM121BQ9BXQ6 578 aaPredicted RBP5.2□□□□□ -1.58
CNOT1-221ENST00000569924 POLR3EQ9NVU0 708 aa5.2□□□□□ -1.58
CNOT1-221ENST00000569924 NPDC1Q9NQX5 325 aaPredicted RBP5.19□□□□□ -1.58
CNOT1-221ENST00000569924 PATL2C9JE40 543 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms