RNA–Protein interactions for RNA: ENST00000569376.5

TNRC6A-217, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 610 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-217ENST00000569376 PSEN1P49768 467 aa9.09□□□□□ -0.95
TNRC6A-217ENST00000569376 SPOCK2Q92563 424 aa9.09□□□□□ -0.95
TNRC6A-217ENST00000569376 KCNH8Q96L42 1107 aa9.09□□□□□ -0.95
TNRC6A-217ENST00000569376 RIMS1Q86UR5 1692 aaKnown RBP9.09□□□□□ -0.95
TNRC6A-217ENST00000569376 IQSEC2Q5JU85 1478 aa9.08□□□□□ -0.96
TNRC6A-217ENST00000569376 UBAP1LF5GYI3 381 aa9.07□□□□□ -0.96
TNRC6A-217ENST00000569376 C3orf67Q6ZVT6 689 aa9.07□□□□□ -0.96
TNRC6A-217ENST00000569376 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.07□□□□□ -0.962e-17■■□□□ 11.7
TNRC6A-217ENST00000569376 CFAP43Q8NDM7 1665 aa9.07□□□□□ -0.96
TNRC6A-217ENST00000569376 KDM5BQ9UGL1 1544 aa9.06□□□□□ -0.96
TNRC6A-217ENST00000569376 PDAP1Q13442 181 aaKnown RBP9.06□□□□□ -0.96
TNRC6A-217ENST00000569376 ARAP3Q8WWN8 1544 aa9.05□□□□□ -0.96
TNRC6A-217ENST00000569376 PHLDB1Q86UU1 1377 aa9.04□□□□□ -0.96
TNRC6A-217ENST00000569376 WDR7Q9Y4E6 1490 aa9.03□□□□□ -0.96
TNRC6A-217ENST00000569376 POGZQ7Z3K3 1410 aa9.03□□□□□ -0.96
TNRC6A-217ENST00000569376 ZCCHC11Q5TAX3 1644 aaKnown RBP9.02□□□□□ -0.96
TNRC6A-217ENST00000569376 SUPT5HO00267 1087 aaKnown RBP9.02□□□□□ -0.97
TNRC6A-217ENST00000569376 RAPGEF3O95398 923 aa9.02□□□□□ -0.97
TNRC6A-217ENST00000569376 PTPRTO14522 1441 aa9.02□□□□□ -0.97
TNRC6A-217ENST00000569376 MED1Q15648 1581 aaPredicted RBP9.02□□□□□ -0.97
TNRC6A-217ENST00000569376 STRCQ7RTU9 1775 aa9.01□□□□□ -0.97
TNRC6A-217ENST00000569376 CIZ1Q9ULV3 898 aaPredicted RBP9.01□□□□□ -0.97
TNRC6A-217ENST00000569376 SETD1BQ9UPS6 1966 aaKnown RBP8.99□□□□□ -0.97
TNRC6A-217ENST00000569376 LTBP4Q8N2S1 1624 aa8.98□□□□□ -0.97
TNRC6A-217ENST00000569376 PREX1Q8TCU6 1659 aa8.98□□□□□ -0.97
TNRC6A-217ENST00000569376 HSPA1LP34931 641 aa8.98□□□□□ -0.97
TNRC6A-217ENST00000569376 MARVELD3Q96A59 401 aa8.98□□□□□ -0.97
TNRC6A-217ENST00000569376 MLECQ14165 292 aa8.97□□□□□ -0.97
TNRC6A-217ENST00000569376 CABP2Q9NPB3 220 aa8.97□□□□□ -0.97
TNRC6A-217ENST00000569376 G3V3G9 751 aa8.96□□□□□ -0.98
TNRC6A-217ENST00000569376 FANCAO15360 1455 aa8.95□□□□□ -0.98
TNRC6A-217ENST00000569376 EMP3P54852 163 aa8.94□□□□□ -0.98
TNRC6A-217ENST00000569376 SPNS2Q8IVW8 549 aa8.94□□□□□ -0.98
TNRC6A-217ENST00000569376 BOLA1Q9Y3E2 137 aa8.94□□□□□ -0.98
TNRC6A-217ENST00000569376 UHRF1BP1Q6BDS2 1440 aa8.94□□□□□ -0.98
TNRC6A-217ENST00000569376 TOM1O60784 492 aa8.93□□□□□ -0.98
TNRC6A-217ENST00000569376 PIP4K2BP78356 416 aa8.93□□□□□ -0.98
TNRC6A-217ENST00000569376 MMRN1Q13201 1228 aa8.93□□□□□ -0.98
TNRC6A-217ENST00000569376 DPY19L2Q6NUT2 758 aa8.93□□□□□ -0.98
TNRC6A-217ENST00000569376 BIVM-ERCC5R4GMW8 1640 aa8.93□□□□□ -0.98
TNRC6A-217ENST00000569376 FER1L4A9Z1Z3 1794 aa8.92□□□□□ -0.98
TNRC6A-217ENST00000569376 CEBPAP49715 358 aaPredicted RBP8.92□□□□□ -0.98
TNRC6A-217ENST00000569376 FAM9AQ8IZU1 332 aaPredicted RBP8.91□□□□□ -0.98
TNRC6A-217ENST00000569376 TTC37Q6PGP7 1564 aa8.9□□□□□ -0.98
TNRC6A-217ENST00000569376 AKNAQ7Z591 1439 aa8.9□□□□□ -0.98
TNRC6A-217ENST00000569376 NEO1Q92859 1461 aa8.89□□□□□ -0.99
TNRC6A-217ENST00000569376 IGF1RP08069 1367 aa8.88□□□□□ -0.99
TNRC6A-217ENST00000569376 IQGAP2Q13576 1575 aa8.88□□□□□ -0.99
TNRC6A-217ENST00000569376 HS3ST6Q96QI5 342 aa8.88□□□□□ -0.99
TNRC6A-217ENST00000569376 DISP1Q96F81 1524 aa8.87□□□□□ -0.99
TNRC6A-217ENST00000569376 FAM205CA6NFA0 338 aa8.87□□□□□ -0.99
TNRC6A-217ENST00000569376 ZNF335Q9H4Z2 1342 aaPredicted RBP8.86□□□□□ -0.99
TNRC6A-217ENST00000569376 ARHGEF40Q8TER5 1519 aa8.86□□□□□ -0.99
TNRC6A-217ENST00000569376 RTN4Q9NQC3 1192 aaKnown RBP8.86□□□□□ -0.99
TNRC6A-217ENST00000569376 HOXB3P14651 431 aaPredicted RBP8.85□□□□□ -0.99
TNRC6A-217ENST00000569376 DENND4BO75064 1496 aaPredicted RBP8.84□□□□□ -0.99
TNRC6A-217ENST00000569376 POTEB3A0JP26 581 aa8.84□□□□□ -0.99
TNRC6A-217ENST00000569376 DOK7Q18PE1 504 aa8.84□□□□□ -0.99
TNRC6A-217ENST00000569376 AMER1Q5JTC6 1135 aaPredicted RBP8.84□□□□□ -0.99
TNRC6A-217ENST00000569376 POTEBQ6S5H4 581 aa8.84□□□□□ -0.99
TNRC6A-217ENST00000569376 EFCAB3Q8N7B9 438 aa8.84□□□□□ -0.99
TNRC6A-217ENST00000569376 RGS17Q9UGC6 210 aaPredicted RBP8.84□□□□□ -0.99
TNRC6A-217ENST00000569376 CARMIL1Q5VZK9 1371 aa8.84□□□□□ -0.99
TNRC6A-217ENST00000569376 FRMPD1Q5SYB0 1578 aa8.83□□□□□ -1
TNRC6A-217ENST00000569376 ZNF710Q8N1W2 664 aa8.83□□□□□ -1
TNRC6A-217ENST00000569376 KRTAP3-3Q9BYR6 98 aa8.83□□□□□ -1
TNRC6A-217ENST00000569376 KRTAP3-2Q9BYR7 98 aa8.83□□□□□ -1
TNRC6A-217ENST00000569376 ESF1Q9H501 851 aaKnown RBP8.83□□□□□ -1
TNRC6A-217ENST00000569376 HOXB1P14653 301 aaPredicted RBP8.82□□□□□ -1
TNRC6A-217ENST00000569376 RNF25Q96BH1 459 aaPredicted RBP8.82□□□□□ -1
TNRC6A-217ENST00000569376 ABCA9Q8IUA7 1624 aa8.82□□□□□ -1
TNRC6A-217ENST00000569376 NCOA1Q15788 1441 aa8.81□□□□□ -1
TNRC6A-217ENST00000569376 KIF27Q86VH2 1401 aa8.81□□□□□ -1
TNRC6A-217ENST00000569376 EFCAB5A4FU69 1503 aa8.81□□□□□ -1
TNRC6A-217ENST00000569376 SOX12O15370 315 aa8.81□□□□□ -1
TNRC6A-217ENST00000569376 PKD2Q13563 968 aa8.81□□□□□ -1
TNRC6A-217ENST00000569376 NCKAP5LQ9HCH0 1330 aa8.8□□□□□ -1
TNRC6A-217ENST00000569376 FHOD3Q2V2M9 1422 aa8.8□□□□□ -1
TNRC6A-217ENST00000569376 RIMBP2O15034 1052 aa8.8□□□□□ -1
TNRC6A-217ENST00000569376 MAGI2Q86UL8 1455 aa8.8□□□□□ -1
TNRC6A-217ENST00000569376 ZFYVE16Q7Z3T8 1539 aa8.8□□□□□ -1
TNRC6A-217ENST00000569376 UGGT2Q9NYU1 1516 aa8.8□□□□□ -1
TNRC6A-217ENST00000569376 ARHGEF12Q9NZN5 1544 aa8.8□□□□□ -1
TNRC6A-217ENST00000569376 RIOK3O14730 519 aaKnown RBP8.79□□□□□ -1
TNRC6A-217ENST00000569376 POTEAQ6S8J7 498 aa8.79□□□□□ -1
TNRC6A-217ENST00000569376 RICTORQ6R327 1708 aa8.79□□□□□ -1
TNRC6A-217ENST00000569376 KIAA0556O60303 1618 aa8.79□□□□□ -1
TNRC6A-217ENST00000569376 ARID3CA6NKF2 412 aa8.78□□□□□ -1
TNRC6A-217ENST00000569376 PTPRKQ15262 1439 aa8.78□□□□□ -1
TNRC6A-217ENST00000569376 TRAPPC8Q9Y2L5 1435 aa8.78□□□□□ -1
TNRC6A-217ENST00000569376 VGFO15240 615 aaPredicted RBP8.77□□□□□ -1.01
TNRC6A-217ENST00000569376 MICALL2Q8IY33 904 aa8.77□□□□□ -1.01
TNRC6A-217ENST00000569376 SIGLEC1Q9BZZ2 1709 aa8.77□□□□□ -1.01
TNRC6A-217ENST00000569376 CAMSAP1Q5T5Y3 1602 aa8.76□□□□□ -1.01
TNRC6A-217ENST00000569376 UPF1Q92900 1129 aaKnown RBP eCLIP8.76□□□□□ -1.01
TNRC6A-217ENST00000569376 ZSWIM6Q9HCJ5 1215 aa8.76□□□□□ -1.01
TNRC6A-217ENST00000569376 ABCA8O94911 1581 aa8.76□□□□□ -1.01
TNRC6A-217ENST00000569376 ERBB3P21860 1342 aa8.76□□□□□ -1.01
TNRC6A-217ENST00000569376 ATP10AO60312 1499 aa8.76□□□□□ -1.01
TNRC6A-217ENST00000569376 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms