RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 ZNF316A6NFI3 1004 aaPredicted RBP12.78□□□□□ -0.36
SMG1-214ENST00000568038 SPNS2Q8IVW8 549 aa12.77□□□□□ -0.37
SMG1-214ENST00000568038 ABCA5Q8WWZ7 1642 aa12.77□□□□□ -0.37
SMG1-214ENST00000568038 GRIN2BQ13224 1484 aa12.74□□□□□ -0.37
SMG1-214ENST00000568038 PDE4AP27815 886 aa12.74□□□□□ -0.37
SMG1-214ENST00000568038 ZNF687Q8N1G0 1237 aa12.74□□□□□ -0.37
SMG1-214ENST00000568038 BBXQ8WY36 941 aaPredicted RBP12.74□□□□□ -0.37
SMG1-214ENST00000568038 CRISPLD2Q9H0B8 497 aa12.74□□□□□ -0.37
SMG1-214ENST00000568038 LHX6Q9UPM6 363 aa12.74□□□□□ -0.37
SMG1-214ENST00000568038 IGF1RP08069 1367 aa12.73□□□□□ -0.37
SMG1-214ENST00000568038 EEA1Q15075 1411 aa12.72□□□□□ -0.37
SMG1-214ENST00000568038 NCKAP5LQ9HCH0 1330 aa12.72□□□□□ -0.37
SMG1-214ENST00000568038 LARP6Q9BRS8 491 aaKnown RBP12.72□□□□□ -0.37
SMG1-214ENST00000568038 PBRM1Q86U86 1689 aa12.72□□□□□ -0.37
SMG1-214ENST00000568038 PPP1R15BQ5SWA1 713 aa12.71□□□□□ -0.37
SMG1-214ENST00000568038 PTCD2Q8WV60 388 aaKnown RBP12.71□□□□□ -0.37
SMG1-214ENST00000568038 UPF1Q92900 1129 aaKnown RBP eCLIP12.71□□□□□ -0.37
SMG1-214ENST00000568038 ERICH3Q5RHP9 1530 aa12.7□□□□□ -0.38
SMG1-214ENST00000568038 SNAPC4Q5SXM2 1469 aa12.7□□□□□ -0.38
SMG1-214ENST00000568038 TBC1D12O60347 775 aa12.69□□□□□ -0.38
SMG1-214ENST00000568038 MMRN1Q13201 1228 aa12.69□□□□□ -0.38
SMG1-214ENST00000568038 CARMIL1Q5VZK9 1371 aa12.68□□□□□ -0.38
SMG1-214ENST00000568038 MAGI1Q96QZ7 1491 aaPredicted RBP12.66□□□□□ -0.38
SMG1-214ENST00000568038 CADPS2Q86UW7 1296 aa12.66□□□□□ -0.38
SMG1-214ENST00000568038 CHMP7Q8WUX9 453 aaPredicted RBP12.66□□□□□ -0.38
SMG1-214ENST00000568038 FHAD1B1AJZ9 1412 aa12.65□□□□□ -0.38
SMG1-214ENST00000568038 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.65□□□□□ -0.38
SMG1-214ENST00000568038 DDX27Q96GQ7 796 aaKnown RBP12.64□□□□□ -0.39
SMG1-214ENST00000568038 CUL7Q14999 1698 aa12.64□□□□□ -0.39
SMG1-214ENST00000568038 ANKRD13DQ6ZTN6 518 aa12.63□□□□□ -0.39
SMG1-214ENST00000568038 ADAMTS12P58397 1594 aa12.63□□□□□ -0.39
SMG1-214ENST00000568038 SYNJ2O15056 1496 aa12.62□□□□□ -0.39
SMG1-214ENST00000568038 PRXQ9BXM0 1461 aa12.62□□□□□ -0.39
SMG1-214ENST00000568038 SPRYD3Q8NCJ5 442 aa12.62□□□□□ -0.39
SMG1-214ENST00000568038 RAPGEF2Q9Y4G8 1499 aa12.61□□□□□ -0.39
SMG1-214ENST00000568038 OXER1Q8TDS5 423 aa12.61□□□□□ -0.39
SMG1-214ENST00000568038 CFAP44Q96MT7 982 aa12.61□□□□□ -0.39
SMG1-214ENST00000568038 AXIN2Q9Y2T1 843 aa12.61□□□□□ -0.39
SMG1-214ENST00000568038 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
SMG1-214ENST00000568038 PAXIP1Q6ZW49 1069 aaPredicted RBP12.59□□□□□ -0.39
SMG1-214ENST00000568038 LOC105371045A0A1W2PR82 267 aa12.58□□□□□ -0.4
SMG1-214ENST00000568038 GRIN2AQ12879 1464 aa12.58□□□□□ -0.4
SMG1-214ENST00000568038 CHD1O14646 1710 aa12.57□□□□□ -0.4
SMG1-214ENST00000568038 KIF21BO75037 1637 aa12.56□□□□□ -0.4
SMG1-214ENST00000568038 PSDA5PKW4 1024 aaPredicted RBP12.56□□□□□ -0.4
SMG1-214ENST00000568038 UBTFP17480 764 aaKnown RBP12.56□□□□□ -0.4
SMG1-214ENST00000568038 MFSD10Q14728 455 aa12.56□□□□□ -0.4
SMG1-214ENST00000568038 LSM11P83369 360 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMG1-214ENST00000568038 POTEEQ6S8J3 1075 aa12.55□□□□□ -0.4
SMG1-214ENST00000568038 GOLGA3Q08378 1498 aa12.54□□□□□ -0.4
SMG1-214ENST00000568038 MAP3K9P80192 1104 aa12.54□□□□□ -0.4
SMG1-214ENST00000568038 PBX2P40425 430 aa12.53□□□□□ -0.4
SMG1-214ENST00000568038 PPP4R3BQ5MIZ7 849 aa12.53□□□□□ -0.4
SMG1-214ENST00000568038 EVI5O60447 810 aa12.51□□□□□ -0.41
SMG1-214ENST00000568038 ARHGAP33O14559 1287 aa12.5□□□□□ -0.41
SMG1-214ENST00000568038 ZNF454Q8N9F8 522 aa12.5□□□□□ -0.41
SMG1-214ENST00000568038 EMILIN3Q9NT22 766 aa12.5□□□□□ -0.41
SMG1-214ENST00000568038 MYT1LQ9UL68 1186 aa12.5□□□□□ -0.41
SMG1-214ENST00000568038 NUP160Q12769 1436 aa12.5□□□□□ -0.41
SMG1-214ENST00000568038 CEP170Q5SW79 1584 aa12.5□□□□□ -0.41
SMG1-214ENST00000568038 RANGAP1P46060 587 aaPredicted RBP12.49□□□□□ -0.41
SMG1-214ENST00000568038 PSEN2P49810 448 aa12.49□□□□□ -0.41
SMG1-214ENST00000568038 RNF166Q96A37 237 aaPredicted RBP12.46□□□□□ -0.41
SMG1-214ENST00000568038 KIAA0586Q9BVV6 1533 aa12.46□□□□□ -0.42
SMG1-214ENST00000568038 KCNK17Q96T54 332 aa12.45□□□□□ -0.42
SMG1-214ENST00000568038 TNIKQ9UKE5 1360 aa12.44□□□□□ -0.42
SMG1-214ENST00000568038 DMRTA1Q5VZB9 504 aa12.44□□□□□ -0.42
SMG1-214ENST00000568038 JPH4Q96JJ6 628 aa12.44□□□□□ -0.42
SMG1-214ENST00000568038 CTTNBP2Q8WZ74 1663 aa12.44□□□□□ -0.42
SMG1-214ENST00000568038 ANO8Q9HCE9 1232 aaPredicted RBP12.43□□□□□ -0.42
SMG1-214ENST00000568038 IQGAP2Q13576 1575 aa12.43□□□□□ -0.42
SMG1-214ENST00000568038 CLASP1Q7Z460 1538 aa12.42□□□□□ -0.42
SMG1-214ENST00000568038 KCNH8Q96L42 1107 aa12.42□□□□□ -0.42
SMG1-214ENST00000568038 PTGER2P43116 358 aa12.41□□□□□ -0.42
SMG1-214ENST00000568038 FOSBP53539 338 aa12.41□□□□□ -0.42
SMG1-214ENST00000568038 ADGRD1Q6QNK2 874 aa12.4□□□□□ -0.42
SMG1-214ENST00000568038 DPYSL4O14531 572 aa12.39□□□□□ -0.43
SMG1-214ENST00000568038 P3H3Q8IVL6 736 aa12.38□□□□□ -0.43
SMG1-214ENST00000568038 WDR70Q9NW82 654 aa12.38□□□□□ -0.43
SMG1-214ENST00000568038 PRG4Q92954 1404 aaPredicted RBP12.37□□□□□ -0.43
SMG1-214ENST00000568038 CAMK2BQ13554 666 aa12.37□□□□□ -0.43
SMG1-214ENST00000568038 ZDHHC16Q969W1 377 aa12.36□□□□□ -0.43
SMG1-214ENST00000568038 BCL2L12Q9HB09 334 aa12.36□□□□□ -0.43
SMG1-214ENST00000568038 UGGT2Q9NYU1 1516 aa12.36□□□□□ -0.43
SMG1-214ENST00000568038 CEP162Q5TB80 1403 aa12.36□□□□□ -0.43
SMG1-214ENST00000568038 SHROOM2Q13796 1616 aa12.35□□□□□ -0.43
SMG1-214ENST00000568038 TTBK1Q5TCY1 1321 aaPredicted RBP12.35□□□□□ -0.43
SMG1-214ENST00000568038 PTPREP23469 700 aa12.34□□□□□ -0.43
SMG1-214ENST00000568038 STAC3Q96MF2 364 aa12.34□□□□□ -0.43
SMG1-214ENST00000568038 ADAM33Q9BZ11 813 aa12.34□□□□□ -0.43
SMG1-214ENST00000568038 CLIP1P30622 1438 aa12.34□□□□□ -0.43
SMG1-214ENST00000568038 CARMIL2Q6F5E8 1435 aa12.34□□□□□ -0.43
SMG1-214ENST00000568038 TK2O00142 265 aa12.33□□□□□ -0.44
SMG1-214ENST00000568038 DISP1Q96F81 1524 aa12.32□□□□□ -0.44
SMG1-214ENST00000568038 ERCC6L2Q5T890 1561 aa12.32□□□□□ -0.44
SMG1-214ENST00000568038 PCDHGA10Q9Y5H3 936 aa12.32□□□□□ -0.44
SMG1-214ENST00000568038 ARHGAP35Q9NRY4 1499 aa12.31□□□□□ -0.44
SMG1-214ENST00000568038 KIAA0556O60303 1618 aa12.3□□□□□ -0.44
SMG1-214ENST00000568038 FHOD3Q2V2M9 1422 aa12.29□□□□□ -0.44
SMG1-214ENST00000568038 EFCAB5A4FU69 1503 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms