RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 STAC3Q96MF2 364 aa10.34□□□□□ -0.75
ATXN3-249ENST00000564606 PLEKHH2Q8IVE3 1493 aa10.34□□□□□ -0.75
ATXN3-249ENST00000564606 KDM5DQ9BY66 1539 aa10.33□□□□□ -0.76
ATXN3-249ENST00000564606 SPDYE2BA6NHP3 402 aa10.33□□□□□ -0.76
ATXN3-249ENST00000564606 SPDYE6P0CI01 402 aa10.33□□□□□ -0.76
ATXN3-249ENST00000564606 SPDYE2Q495Y8 402 aa10.33□□□□□ -0.76
ATXN3-249ENST00000564606 SPATA31E1Q6ZUB1 1445 aa10.33□□□□□ -0.76
ATXN3-249ENST00000564606 ARHGEF5Q12774 1597 aa10.32□□□□□ -0.76
ATXN3-249ENST00000564606 RALBP1Q15311 655 aa10.32□□□□□ -0.76
ATXN3-249ENST00000564606 ZNF608Q9ULD9 1512 aaPredicted RBP10.32□□□□□ -0.76
ATXN3-249ENST00000564606 WASHC2CQ9Y4E1 1318 aa10.32□□□□□ -0.76
ATXN3-249ENST00000564606 CROCC2H7BZ55 1655 aa10.31□□□□□ -0.76
ATXN3-249ENST00000564606 PKD2Q13563 968 aa10.31□□□□□ -0.76
ATXN3-249ENST00000564606 C9orf84Q5VXU9 1444 aa10.31□□□□□ -0.76
ATXN3-249ENST00000564606 FANCIQ9NVI1 1328 aa10.31□□□□□ -0.76
ATXN3-249ENST00000564606 DENND4BO75064 1496 aaPredicted RBP10.3□□□□□ -0.76
ATXN3-249ENST00000564606 USP47Q96K76 1375 aa10.3□□□□□ -0.76
ATXN3-249ENST00000564606 KIF15Q9NS87 1388 aa10.3□□□□□ -0.76
ATXN3-249ENST00000564606 BCANQ96GW7 911 aa10.3□□□□□ -0.76
ATXN3-249ENST00000564606 ZNF777Q9ULD5 760 aaPredicted RBP10.3□□□□□ -0.76
ATXN3-249ENST00000564606 PRG4Q92954 1404 aaPredicted RBP10.3□□□□□ -0.76
ATXN3-249ENST00000564606 KIF7Q2M1P5 1343 aa10.3□□□□□ -0.76
ATXN3-249ENST00000564606 PZPP20742 1482 aa10.3□□□□□ -0.76
ATXN3-249ENST00000564606 RALGAPBQ86X10 1494 aa10.3□□□□□ -0.76
ATXN3-249ENST00000564606 NUP155O75694 1391 aa10.29□□□□□ -0.76
ATXN3-249ENST00000564606 ABCA8O94911 1581 aa10.29□□□□□ -0.76
ATXN3-249ENST00000564606 MBD5Q9P267 1494 aa10.29□□□□□ -0.76
ATXN3-249ENST00000564606 PDE3BQ13370 1112 aa10.28□□□□□ -0.76
ATXN3-249ENST00000564606 RBM19Q9Y4C8 960 aaKnown RBP10.28□□□□□ -0.76
ATXN3-249ENST00000564606 CCDC141Q6ZP82 1450 aa10.28□□□□□ -0.76
ATXN3-249ENST00000564606 INSRP06213 1382 aa10.27□□□□□ -0.76
ATXN3-249ENST00000564606 PTPRGP23470 1445 aa10.27□□□□□ -0.77
ATXN3-249ENST00000564606 SMG6Q86US8 1419 aaKnown RBP10.27□□□□□ -0.77
ATXN3-249ENST00000564606 KDM6BO15054 1643 aa10.27□□□□□ -0.77
ATXN3-249ENST00000564606 FAM9BQ8IZU0 186 aa10.27□□□□□ -0.77
ATXN3-249ENST00000564606 TMC1Q8TDI8 760 aa10.27□□□□□ -0.77
ATXN3-249ENST00000564606 CARD11Q9BXL7 1154 aa10.27□□□□□ -0.77
ATXN3-249ENST00000564606 BRD4O60885 1362 aaPredicted RBP10.26□□□□□ -0.77
ATXN3-249ENST00000564606 CEP170Q5SW79 1584 aa10.26□□□□□ -0.77
ATXN3-249ENST00000564606 PLB1Q6P1J6 1458 aa10.26□□□□□ -0.77
ATXN3-249ENST00000564606 ABCC10Q5T3U5 1492 aa10.25□□□□□ -0.77
ATXN3-249ENST00000564606 ARID3CA6NKF2 412 aa10.25□□□□□ -0.77
ATXN3-249ENST00000564606 NBPF8Q3BBV2 869 aa10.25□□□□□ -0.77
ATXN3-249ENST00000564606 CDCA8Q53HL2 280 aa10.25□□□□□ -0.77
ATXN3-249ENST00000564606 NUDCQ9Y266 331 aa10.25□□□□□ -0.77
ATXN3-249ENST00000564606 ZNF644Q9H582 1327 aaPredicted RBP10.25□□□□□ -0.77
ATXN3-249ENST00000564606 MYBBP1AQ9BQG0 1328 aaKnown RBP10.24□□□□□ -0.77
ATXN3-249ENST00000564606 CCDC144AA2RUR9 1427 aa10.24□□□□□ -0.77
ATXN3-249ENST00000564606 ATP10BO94823 1461 aa10.23□□□□□ -0.77
ATXN3-249ENST00000564606 ZMYM4Q5VZL5 1548 aa10.23□□□□□ -0.77
ATXN3-249ENST00000564606 MAST1Q9Y2H9 1570 aa10.22□□□□□ -0.77
ATXN3-249ENST00000564606 EIF2AK4Q9P2K8 1649 aaKnown RBP10.22□□□□□ -0.77
ATXN3-249ENST00000564606 KDM5CP41229 1560 aa10.22□□□□□ -0.77
ATXN3-249ENST00000564606 ZNF326Q5BKZ1 582 aaKnown RBP10.2□□□□□ -0.78
ATXN3-249ENST00000564606 CDC42BPAQ5VT25 1732 aa10.2□□□□□ -0.78
ATXN3-249ENST00000564606 NLRP13Q86W25 1043 aa10.2□□□□□ -0.78
ATXN3-249ENST00000564606 LAMC1P11047 1609 aa10.19□□□□□ -0.78
ATXN3-249ENST00000564606 ERBINQ96RT1 1412 aa10.19□□□□□ -0.78
ATXN3-249ENST00000564606 PREX2Q70Z35 1606 aa10.18□□□□□ -0.78
ATXN3-249ENST00000564606 DHX29Q7Z478 1369 aaKnown RBP10.18□□□□□ -0.78
ATXN3-249ENST00000564606 TMF1P82094 1093 aa10.18□□□□□ -0.78
ATXN3-249ENST00000564606 DCAF11Q8TEB1 546 aa10.18□□□□□ -0.78
ATXN3-249ENST00000564606 CCDC136Q96JN2 1154 aa10.18□□□□□ -0.78
ATXN3-249ENST00000564606 PLXNC1O60486 1568 aa10.18□□□□□ -0.78
ATXN3-249ENST00000564606 DUOX2Q9NRD8 1548 aa10.17□□□□□ -0.78
ATXN3-249ENST00000564606 FAM135AQ9P2D6 1515 aa10.17□□□□□ -0.78
ATXN3-249ENST00000564606 ATP10AO60312 1499 aa10.17□□□□□ -0.78
ATXN3-249ENST00000564606 GPRASP1Q5JY77 1395 aa10.17□□□□□ -0.78
ATXN3-249ENST00000564606 RNF123Q5XPI4 1314 aa10.17□□□□□ -0.78
ATXN3-249ENST00000564606 ANP32AP39687 249 aaKnown RBP10.17□□□□□ -0.78
ATXN3-249ENST00000564606 EFCAB2Q5VUJ9 269 aa10.17□□□□□ -0.78
ATXN3-249ENST00000564606 POLR3GLQ9BT43 218 aa10.17□□□□□ -0.78
ATXN3-249ENST00000564606 C11orf95C9JLR9 678 aaPredicted RBP10.16□□□□□ -0.78
ATXN3-249ENST00000564606 NGEFQ8N5V2 710 aa10.16□□□□□ -0.78
ATXN3-249ENST00000564606 PNISRQ8TF01 805 aaKnown RBP10.16□□□□□ -0.78
ATXN3-249ENST00000564606 UNC13BO14795 1591 aa10.15□□□□□ -0.78
ATXN3-249ENST00000564606 ARHGAP5Q13017 1502 aa10.15□□□□□ -0.78
ATXN3-249ENST00000564606 LRPPRCP42704 1394 aaKnown RBP10.14□□□□□ -0.79
ATXN3-249ENST00000564606 EIF3AQ14152 1382 aaKnown RBP10.14□□□□□ -0.79
ATXN3-249ENST00000564606 ST20-MTHFSA0A0A6YYL1 179 aa10.14□□□□□ -0.79
ATXN3-249ENST00000564606 HNRNPMP52272 730 aaKnown RBP eCLIP10.14□□□□□ -0.79
ATXN3-249ENST00000564606 PRAG1Q86YV5 1406 aa10.14□□□□□ -0.79
ATXN3-249ENST00000564606 KANK1Q14678 1352 aa10.14□□□□□ -0.79
ATXN3-249ENST00000564606 ARAP3Q8WWN8 1544 aa10.13□□□□□ -0.79
ATXN3-249ENST00000564606 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.13□□□□□ -0.79
ATXN3-249ENST00000564606 STAG3Q9UJ98 1225 aa10.13□□□□□ -0.79
ATXN3-249ENST00000564606 RTEL1-TNFRSF6BF6WH68 1400 aa10.13□□□□□ -0.79
ATXN3-249ENST00000564606 ABCC2Q92887 1545 aa10.12□□□□□ -0.79
ATXN3-249ENST00000564606 UHRF1BP1LA0JNW5 1464 aa10.12□□□□□ -0.79
ATXN3-249ENST00000564606 KDM2AQ9Y2K7 1162 aa10.12□□□□□ -0.79
ATXN3-249ENST00000564606 IQGAP3Q86VI3 1631 aa10.11□□□□□ -0.79
ATXN3-249ENST00000564606 TCERG1O14776 1098 aaKnown RBP10.11□□□□□ -0.79
ATXN3-249ENST00000564606 PARD3Q8TEW0 1356 aa10.11□□□□□ -0.79
ATXN3-249ENST00000564606 MYO5CQ9NQX4 1742 aa10.1□□□□□ -0.79
ATXN3-249ENST00000564606 SAMD9LQ8IVG5 1584 aa10.1□□□□□ -0.79
ATXN3-249ENST00000564606 PLCH2O75038 1416 aa10.1□□□□□ -0.79
ATXN3-249ENST00000564606 MS4A1P11836 297 aa10.1□□□□□ -0.79
ATXN3-249ENST00000564606 SHROOM2Q13796 1616 aa10.1□□□□□ -0.79
ATXN3-249ENST00000564606 SCAPERQ9BY12 1400 aa10.09□□□□□ -0.79
ATXN3-249ENST00000564606 MAGI2Q86UL8 1455 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 308.1 ms