RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 TARBP1Q13395 1621 aaKnown RBP9.65□□□□□ -0.86
TUBGCP4-209ENST00000564511 CHMP7Q8WUX9 453 aaPredicted RBP9.65□□□□□ -0.86
TUBGCP4-209ENST00000564511 NCKAP5LQ9HCH0 1330 aa9.64□□□□□ -0.87
TUBGCP4-209ENST00000564511 POLA1P09884 1462 aaPredicted RBP9.63□□□□□ -0.87
TUBGCP4-209ENST00000564511 RAD54L2Q9Y4B4 1467 aa9.62□□□□□ -0.87
TUBGCP4-209ENST00000564511 PDE4AP27815 886 aa9.62□□□□□ -0.87
TUBGCP4-209ENST00000564511 SOGA1O94964 1423 aa9.62□□□□□ -0.87
TUBGCP4-209ENST00000564511 POTEEQ6S8J3 1075 aa9.61□□□□□ -0.87
TUBGCP4-209ENST00000564511 PPP1R15BQ5SWA1 713 aa9.6□□□□□ -0.87
TUBGCP4-209ENST00000564511 SNAPC4Q5SXM2 1469 aa9.59□□□□□ -0.87
TUBGCP4-209ENST00000564511 TBC1D12O60347 775 aa9.59□□□□□ -0.87
TUBGCP4-209ENST00000564511 OXER1Q8TDS5 423 aa9.59□□□□□ -0.87
TUBGCP4-209ENST00000564511 CLASP1Q7Z460 1538 aa9.58□□□□□ -0.88
TUBGCP4-209ENST00000564511 ANKRD13DQ6ZTN6 518 aa9.58□□□□□ -0.88
TUBGCP4-209ENST00000564511 AMER1Q5JTC6 1135 aaPredicted RBP9.57□□□□□ -0.88
TUBGCP4-209ENST00000564511 UPF1Q92900 1129 aaKnown RBP eCLIP9.57□□□□□ -0.88
TUBGCP4-209ENST00000564511 LARP6Q9BRS8 491 aaKnown RBP9.57□□□□□ -0.88
TUBGCP4-209ENST00000564511 AXIN2Q9Y2T1 843 aa9.57□□□□□ -0.88
TUBGCP4-209ENST00000564511 SYNJ1O43426 1573 aa9.57□□□□□ -0.88
TUBGCP4-209ENST00000564511 PBX2P40425 430 aa9.56□□□□□ -0.88
TUBGCP4-209ENST00000564511 LSM11P83369 360 aaKnown RBP eCLIP9.56□□□□□ -0.88
TUBGCP4-209ENST00000564511 CADPS2Q86UW7 1296 aa9.56□□□□□ -0.88
TUBGCP4-209ENST00000564511 RTN4Q9NQC3 1192 aaKnown RBP9.56□□□□□ -0.88
TUBGCP4-209ENST00000564511 GAPVD1Q14C86 1478 aa9.55□□□□□ -0.88
TUBGCP4-209ENST00000564511 DISP3Q9P2K9 1392 aa9.55□□□□□ -0.88
TUBGCP4-209ENST00000564511 PSDA5PKW4 1024 aaPredicted RBP9.55□□□□□ -0.88
TUBGCP4-209ENST00000564511 BBXQ8WY36 941 aaPredicted RBP9.55□□□□□ -0.88
TUBGCP4-209ENST00000564511 MAGI1Q96QZ7 1491 aaPredicted RBP9.54□□□□□ -0.88
TUBGCP4-209ENST00000564511 MFSD10Q14728 455 aa9.54□□□□□ -0.88
TUBGCP4-209ENST00000564511 GRIN2BQ13224 1484 aa9.53□□□□□ -0.88
TUBGCP4-209ENST00000564511 FGD5Q6ZNL6 1462 aa9.53□□□□□ -0.88
TUBGCP4-209ENST00000564511 DDX27Q96GQ7 796 aaKnown RBP9.53□□□□□ -0.88
TUBGCP4-209ENST00000564511 MYT1LQ9UL68 1186 aa9.53□□□□□ -0.88
TUBGCP4-209ENST00000564511 SYNJ2O15056 1496 aa9.53□□□□□ -0.88
TUBGCP4-209ENST00000564511 ARHGAP33O14559 1287 aa9.52□□□□□ -0.89
TUBGCP4-209ENST00000564511 RNF166Q96A37 237 aaPredicted RBP9.51□□□□□ -0.89
TUBGCP4-209ENST00000564511 WDR97A6NE52 1622 aa9.5□□□□□ -0.89
TUBGCP4-209ENST00000564511 ERCC6L2Q5T890 1561 aa9.5□□□□□ -0.89
TUBGCP4-209ENST00000564511 PTGER2P43116 358 aa9.49□□□□□ -0.89
TUBGCP4-209ENST00000564511 PPP4R3BQ5MIZ7 849 aa9.49□□□□□ -0.89
TUBGCP4-209ENST00000564511 PSEN2P49810 448 aa9.48□□□□□ -0.89
TUBGCP4-209ENST00000564511 DMRTA1Q5VZB9 504 aa9.47□□□□□ -0.89
TUBGCP4-209ENST00000564511 ANO8Q9HCE9 1232 aaPredicted RBP9.47□□□□□ -0.89
TUBGCP4-209ENST00000564511 EMILIN3Q9NT22 766 aa9.47□□□□□ -0.89
TUBGCP4-209ENST00000564511 CUX1P39880 1505 aa9.46□□□□□ -0.89
TUBGCP4-209ENST00000564511 EVI5O60447 810 aa9.45□□□□□ -0.9
TUBGCP4-209ENST00000564511 ADGRD1Q6QNK2 874 aa9.45□□□□□ -0.9
TUBGCP4-209ENST00000564511 MAP3K9P80192 1104 aa9.44□□□□□ -0.9
TUBGCP4-209ENST00000564511 ZNF454Q8N9F8 522 aa9.44□□□□□ -0.9
TUBGCP4-209ENST00000564511 SPRYD3Q8NCJ5 442 aa9.44□□□□□ -0.9
TUBGCP4-209ENST00000564511 FOSBP53539 338 aa9.43□□□□□ -0.9
TUBGCP4-209ENST00000564511 TK2O00142 265 aa9.42□□□□□ -0.9
TUBGCP4-209ENST00000564511 KCNK17Q96T54 332 aa9.41□□□□□ -0.9
TUBGCP4-209ENST00000564511 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.41□□□□□ -0.9
TUBGCP4-209ENST00000564511 PBRM1Q86U86 1689 aa9.41□□□□□ -0.9
TUBGCP4-209ENST00000564511 GRIN2AQ12879 1464 aa9.4□□□□□ -0.9
TUBGCP4-209ENST00000564511 HRO43593 1189 aa9.4□□□□□ -0.9
TUBGCP4-209ENST00000564511 CAMK2BQ13554 666 aa9.4□□□□□ -0.9
TUBGCP4-209ENST00000564511 CEP170Q5SW79 1584 aa9.4□□□□□ -0.9
TUBGCP4-209ENST00000564511 FAM69CQ0P6D2 419 aa9.39□□□□□ -0.91
TUBGCP4-209ENST00000564511 JPH4Q96JJ6 628 aa9.39□□□□□ -0.91
TUBGCP4-209ENST00000564511 BCL2L12Q9HB09 334 aa9.39□□□□□ -0.91
TUBGCP4-209ENST00000564511 ABCA10Q8WWZ4 1543 aa9.39□□□□□ -0.91
TUBGCP4-209ENST00000564511 PAXIP1Q6ZW49 1069 aaPredicted RBP9.37□□□□□ -0.91
TUBGCP4-209ENST00000564511 ABCA5Q8WWZ7 1642 aa9.37□□□□□ -0.91
TUBGCP4-209ENST00000564511 NUP160Q12769 1436 aa9.37□□□□□ -0.91
TUBGCP4-209ENST00000564511 ZDHHC16Q969W1 377 aa9.36□□□□□ -0.91
TUBGCP4-209ENST00000564511 KCNH8Q96L42 1107 aa9.36□□□□□ -0.91
TUBGCP4-209ENST00000564511 CFAP44Q96MT7 982 aa9.36□□□□□ -0.91
TUBGCP4-209ENST00000564511 ADAM33Q9BZ11 813 aa9.36□□□□□ -0.91
TUBGCP4-209ENST00000564511 PRG4Q92954 1404 aaPredicted RBP9.35□□□□□ -0.91
TUBGCP4-209ENST00000564511 VPS9D1Q9Y2B5 631 aa9.35□□□□□ -0.91
TUBGCP4-209ENST00000564511 FHAD1B1AJZ9 1412 aa9.34□□□□□ -0.91
TUBGCP4-209ENST00000564511 WRNQ14191 1432 aaPredicted RBP eCLIP9.34□□□□□ -0.91
TUBGCP4-209ENST00000564511 KIF13AQ9H1H9 1805 aa9.34□□□□□ -0.91
TUBGCP4-209ENST00000564511 PTPREP23469 700 aa9.34□□□□□ -0.91
TUBGCP4-209ENST00000564511 PCDHGA10Q9Y5H3 936 aa9.34□□□□□ -0.91
TUBGCP4-209ENST00000564511 DPYSL4O14531 572 aa9.33□□□□□ -0.92
TUBGCP4-209ENST00000564511 SLC4A5Q9BY07 1137 aa9.33□□□□□ -0.92
TUBGCP4-209ENST00000564511 ABCC10Q5T3U5 1492 aa9.33□□□□□ -0.92
TUBGCP4-209ENST00000564511 ADAMTS12P58397 1594 aa9.33□□□□□ -0.92
TUBGCP4-209ENST00000564511 HECW2Q9P2P5 1572 aa9.33□□□□□ -0.92
TUBGCP4-209ENST00000564511 SHROOM2Q13796 1616 aa9.32□□□□□ -0.92
TUBGCP4-209ENST00000564511 ZBED2Q9BTP6 218 aa9.31□□□□□ -0.92
TUBGCP4-209ENST00000564511 PHF14O94880 888 aa9.3□□□□□ -0.92
TUBGCP4-209ENST00000564511 BHMG1C9JSJ3 638 aaPredicted RBP9.29□□□□□ -0.92
TUBGCP4-209ENST00000564511 STAC3Q96MF2 364 aa9.29□□□□□ -0.92
TUBGCP4-209ENST00000564511 TYW1BQ6NUM6 668 aa9.28□□□□□ -0.92
TUBGCP4-209ENST00000564511 HCSTQ9UBK5 93 aa9.28□□□□□ -0.92
TUBGCP4-209ENST00000564511 KCTD12Q96CX2 325 aaKnown RBP9.27□□□□□ -0.93
TUBGCP4-209ENST00000564511 KDM6BO15054 1643 aa9.27□□□□□ -0.93
TUBGCP4-209ENST00000564511 MAPKBP1O60336 1514 aa9.26□□□□□ -0.93
TUBGCP4-209ENST00000564511 ERICH3Q5RHP9 1530 aa9.26□□□□□ -0.93
TUBGCP4-209ENST00000564511 FBXW7Q969H0 707 aa9.26□□□□□ -0.93
TUBGCP4-209ENST00000564511 SPATA31D1Q6ZQQ2 1576 aa9.25□□□□□ -0.93
TUBGCP4-209ENST00000564511 DIP2BQ9P265 1576 aa9.25□□□□□ -0.93
TUBGCP4-209ENST00000564511 COL9A1P20849 921 aa9.25□□□□□ -0.93
TUBGCP4-209ENST00000564511 E2F4Q16254 413 aa9.25□□□□□ -0.93
TUBGCP4-209ENST00000564511 PPP1R3GB7ZBB8 358 aa9.24□□□□□ -0.93
TUBGCP4-209ENST00000564511 SUPT5HO00267 1087 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms