RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 IFFO2Q5TF58 517 aa7.62□□□□□ -1.19
TUBGCP4-207ENST00000563963 E9PSI1 815 aa7.62□□□□□ -1.19
TUBGCP4-207ENST00000563963 URB2Q14146 1524 aaKnown RBP7.61□□□□□ -1.19
TUBGCP4-207ENST00000563963 ARHGEF11O15085 1522 aa7.61□□□□□ -1.19
TUBGCP4-207ENST00000563963 ARID4AP29374 1257 aaPredicted RBP7.6□□□□□ -1.19
TUBGCP4-207ENST00000563963 PPP4R3BQ5MIZ7 849 aa7.6□□□□□ -1.19
TUBGCP4-207ENST00000563963 SYNJ1O43426 1573 aa7.6□□□□□ -1.19
TUBGCP4-207ENST00000563963 NRDCO43847 1150 aa7.6□□□□□ -1.19
TUBGCP4-207ENST00000563963 WIZO95785 1651 aa7.6□□□□□ -1.19
TUBGCP4-207ENST00000563963 ANP32CO43423 234 aa7.6□□□□□ -1.19
TUBGCP4-207ENST00000563963 UTP14CQ5TAP6 766 aaKnown RBP7.6□□□□□ -1.19
TUBGCP4-207ENST00000563963 NOL8Q76FK4 1167 aaKnown RBP7.6□□□□□ -1.19
TUBGCP4-207ENST00000563963 AEBP1Q8IUX7 1158 aa7.59□□□□□ -1.19
TUBGCP4-207ENST00000563963 MTERF4Q7Z6M4 381 aaKnown RBP7.59□□□□□ -1.19
TUBGCP4-207ENST00000563963 KIF20AO95235 890 aa7.59□□□□□ -1.2
TUBGCP4-207ENST00000563963 GSE1Q14687 1217 aa7.59□□□□□ -1.2
TUBGCP4-207ENST00000563963 NPM3O75607 178 aaKnown RBP7.58□□□□□ -1.2
TUBGCP4-207ENST00000563963 FOXD4L6Q3SYB3 417 aaPredicted RBP7.58□□□□□ -1.2
TUBGCP4-207ENST00000563963 FOXD4L3Q6VB84 417 aaPredicted RBP7.58□□□□□ -1.2
TUBGCP4-207ENST00000563963 TERF2IPQ9NYB0 399 aa7.58□□□□□ -1.2
TUBGCP4-207ENST00000563963 WASHC2AQ641Q2 1341 aa7.58□□□□□ -1.2
TUBGCP4-207ENST00000563963 EIF4G3O43432 1585 aaKnown RBP7.58□□□□□ -1.2
TUBGCP4-207ENST00000563963 ZHX1Q9UKY1 873 aaPredicted RBP7.58□□□□□ -1.2
TUBGCP4-207ENST00000563963 TMCO4Q5TGY1 634 aa7.58□□□□□ -1.2
TUBGCP4-207ENST00000563963 GOLGA6L3A6NEY3 463 aa7.57□□□□□ -1.2
TUBGCP4-207ENST00000563963 MAGI1Q96QZ7 1491 aaPredicted RBP7.57□□□□□ -1.2
TUBGCP4-207ENST00000563963 NBPF9Q3BBW0 867 aa7.57□□□□□ -1.2
TUBGCP4-207ENST00000563963 EGFL6Q8IUX8 553 aa7.57□□□□□ -1.2
TUBGCP4-207ENST00000563963 CALRP27797 417 aaKnown RBP7.57□□□□□ -1.2
TUBGCP4-207ENST00000563963 TOPBP1Q92547 1522 aa7.57□□□□□ -1.2
TUBGCP4-207ENST00000563963 GOLIM4O00461 696 aa7.56□□□□□ -1.2
TUBGCP4-207ENST00000563963 SPTY2D1Q68D10 685 aaPredicted RBP7.56□□□□□ -1.2
TUBGCP4-207ENST00000563963 CARD10Q9BWT7 1032 aa7.56□□□□□ -1.2
TUBGCP4-207ENST00000563963 BANK1Q8NDB2 785 aa7.56□□□□□ -1.2
TUBGCP4-207ENST00000563963 DDRGK1Q96HY6 314 aa7.56□□□□□ -1.2
TUBGCP4-207ENST00000563963 RINLQ6ZS11 566 aa7.56□□□□□ -1.2
TUBGCP4-207ENST00000563963 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.56□□□□□ -1.23e-10■■■■■ 153.8
TUBGCP4-207ENST00000563963 RBM28Q9NW13 759 aaKnown RBP7.56□□□□□ -1.2
TUBGCP4-207ENST00000563963 SH3BP1Q9Y3L3 701 aa7.55□□□□□ -1.2
TUBGCP4-207ENST00000563963 PSEN1P49768 467 aa7.55□□□□□ -1.2
TUBGCP4-207ENST00000563963 ARMCX6Q7L4S7 300 aa7.55□□□□□ -1.2
TUBGCP4-207ENST00000563963 CHD1O14646 1710 aa7.55□□□□□ -1.2
TUBGCP4-207ENST00000563963 LMOD3Q0VAK6 560 aa7.55□□□□□ -1.2
TUBGCP4-207ENST00000563963 MIER1Q8N108 512 aa7.55□□□□□ -1.2
TUBGCP4-207ENST00000563963 MYH16Q9H6N6 1097 aa7.54□□□□□ -1.2
TUBGCP4-207ENST00000563963 SLC52A1Q9NWF4 448 aa7.54□□□□□ -1.2
TUBGCP4-207ENST00000563963 TARBP1Q13395 1621 aaKnown RBP7.54□□□□□ -1.2
TUBGCP4-207ENST00000563963 LOC102724159A0A0B4J2E5 919 aa7.54□□□□□ -1.2
TUBGCP4-207ENST00000563963 PWP2Q15269 919 aaKnown RBP7.54□□□□□ -1.2
TUBGCP4-207ENST00000563963 YY1AP1Q9H869 796 aa7.54□□□□□ -1.2
TUBGCP4-207ENST00000563963 MRVI1Q9Y6F6 885 aa7.54□□□□□ -1.2
TUBGCP4-207ENST00000563963 CLASP1Q7Z460 1538 aa7.54□□□□□ -1.2
TUBGCP4-207ENST00000563963 HDAC1Q13547 482 aaPredicted RBP7.53□□□□□ -1.2
TUBGCP4-207ENST00000563963 ARID3CA6NKF2 412 aa7.53□□□□□ -1.2
TUBGCP4-207ENST00000563963 LETM1O95202 739 aaPredicted RBP7.53□□□□□ -1.2
TUBGCP4-207ENST00000563963 SEMA3FQ13275 785 aa7.53□□□□□ -1.2
TUBGCP4-207ENST00000563963 OTUD6BQ8N6M0 293 aa7.53□□□□□ -1.2
TUBGCP4-207ENST00000563963 ERCC6L2Q5T890 1561 aa7.53□□□□□ -1.2
TUBGCP4-207ENST00000563963 NBPF6Q5VWK0 638 aa7.52□□□□□ -1.2
TUBGCP4-207ENST00000563963 NBPF5PQ86XG9 351 aaPredicted RBP7.52□□□□□ -1.2
TUBGCP4-207ENST00000563963 NBPF4Q96M43 638 aa7.52□□□□□ -1.2
TUBGCP4-207ENST00000563963 GEMIN8Q9NWZ8 242 aaKnown RBP7.52□□□□□ -1.2
TUBGCP4-207ENST00000563963 CDCA8Q53HL2 280 aa7.52□□□□□ -1.21
TUBGCP4-207ENST00000563963 ZBTB12Q9Y330 459 aaPredicted RBP7.52□□□□□ -1.21
TUBGCP4-207ENST00000563963 TSHZ1Q6ZSZ6 1077 aa7.52□□□□□ -1.21
TUBGCP4-207ENST00000563963 PAIP2Q9BPZ3 127 aaKnown RBP7.52□□□□□ -1.21
TUBGCP4-207ENST00000563963 POLD1P28340 1107 aa7.51□□□□□ -1.21
TUBGCP4-207ENST00000563963 MAP2K1Q02750 393 aaPredicted RBP7.51□□□□□ -1.21
TUBGCP4-207ENST00000563963 GORABQ5T7V8 394 aa7.51□□□□□ -1.21
TUBGCP4-207ENST00000563963 GTPBP4Q9BZE4 634 aaKnown RBP7.51□□□□□ -1.21
TUBGCP4-207ENST00000563963 MFAP1P55081 439 aaKnown RBP7.5□□□□□ -1.21
TUBGCP4-207ENST00000563963 IPO9Q96P70 1041 aaKnown RBP7.5□□□□□ -1.21
TUBGCP4-207ENST00000563963 TSPYL1Q9H0U9 437 aa7.5□□□□□ -1.21
TUBGCP4-207ENST00000563963 RBM26Q5T8P6 1007 aaKnown RBP7.5□□□□□ -1.21
TUBGCP4-207ENST00000563963 ZNF500O60304 480 aaPredicted RBP7.5□□□□□ -1.21
TUBGCP4-207ENST00000563963 MPNDQ8N594 471 aa7.5□□□□□ -1.21
TUBGCP4-207ENST00000563963 P3H3Q8IVL6 736 aa7.5□□□□□ -1.21
TUBGCP4-207ENST00000563963 RIPOR2Q9Y4F9 1068 aa7.49□□□□□ -1.21
TUBGCP4-207ENST00000563963 HMGB1P1B2RPK0 211 aaPredicted RBP7.49□□□□□ -1.21
TUBGCP4-207ENST00000563963 APBB1O00213 710 aa7.49□□□□□ -1.21
TUBGCP4-207ENST00000563963 DMTNQ08495 405 aa7.49□□□□□ -1.21
TUBGCP4-207ENST00000563963 SATB1Q01826 763 aa7.49□□□□□ -1.21
TUBGCP4-207ENST00000563963 L1TD1Q5T7N2 865 aaKnown RBP7.49□□□□□ -1.21
TUBGCP4-207ENST00000563963 GRIN2BQ13224 1484 aa7.48□□□□□ -1.21
TUBGCP4-207ENST00000563963 ARAP1Q96P48 1450 aa7.48□□□□□ -1.21
TUBGCP4-207ENST00000563963 ZNF513Q8N8E2 541 aaPredicted RBP7.48□□□□□ -1.21
TUBGCP4-207ENST00000563963 ITGAEP38570 1179 aa7.48□□□□□ -1.21
TUBGCP4-207ENST00000563963 SLC20A2Q08357 652 aa7.48□□□□□ -1.21
TUBGCP4-207ENST00000563963 C1orf115Q9H7X2 142 aa7.48□□□□□ -1.21
TUBGCP4-207ENST00000563963 RAI14Q9P0K7 980 aa7.48□□□□□ -1.21
TUBGCP4-207ENST00000563963 SYNJ2O15056 1496 aa7.47□□□□□ -1.21
TUBGCP4-207ENST00000563963 PCDH10Q9P2E7 1040 aa7.47□□□□□ -1.21
TUBGCP4-207ENST00000563963 CLCN1P35523 988 aa7.47□□□□□ -1.21
TUBGCP4-207ENST00000563963 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.47□□□□□ -1.21
TUBGCP4-207ENST00000563963 TNNT3P45378 269 aaPredicted RBP7.46□□□□□ -1.22
TUBGCP4-207ENST00000563963 NEUROD2Q15784 382 aa7.45□□□□□ -1.22
TUBGCP4-207ENST00000563963 SETDB1Q15047 1291 aa7.45□□□□□ -1.22
TUBGCP4-207ENST00000563963 SGSM3Q96HU1 749 aa7.45□□□□□ -1.22
TUBGCP4-207ENST00000563963 PBRM1Q86U86 1689 aa7.45□□□□□ -1.22
TUBGCP4-207ENST00000563963 CCDC88BA6NC98 1476 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms