RNA–Protein interactions for RNA: ENST00000560636.5

SEMA6D-215, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-215ENST00000560636 PLCB2Q00722 1185 aa13.11□□□□□ -0.31
SEMA6D-215ENST00000560636 EVI5O60447 810 aa13.1□□□□□ -0.31
SEMA6D-215ENST00000560636 URB2Q14146 1524 aaKnown RBP13.08□□□□□ -0.31
SEMA6D-215ENST00000560636 PRDM2Q13029 1718 aa13.08□□□□□ -0.32
SEMA6D-215ENST00000560636 E2F4Q16254 413 aa13.06□□□□□ -0.32
SEMA6D-215ENST00000560636 PPP4R3BQ5MIZ7 849 aa13.06□□□□□ -0.32
SEMA6D-215ENST00000560636 ANO8Q9HCE9 1232 aaPredicted RBP13.05□□□□□ -0.32
SEMA6D-215ENST00000560636 DPYSL4O14531 572 aa13.04□□□□□ -0.32
SEMA6D-215ENST00000560636 PBX2P40425 430 aa13.04□□□□□ -0.32
SEMA6D-215ENST00000560636 ZNF454Q8N9F8 522 aa13.03□□□□□ -0.32
SEMA6D-215ENST00000560636 ABCC8Q09428 1581 aa13.01□□□□□ -0.33
SEMA6D-215ENST00000560636 SPNS2Q8IVW8 549 aa13□□□□□ -0.33
SEMA6D-215ENST00000560636 AXIN2Q9Y2T1 843 aa12.99□□□□□ -0.33
SEMA6D-215ENST00000560636 ARHGAP33O14559 1287 aa12.98□□□□□ -0.33
SEMA6D-215ENST00000560636 FOSBP53539 338 aa12.98□□□□□ -0.33
SEMA6D-215ENST00000560636 JPH4Q96JJ6 628 aa12.98□□□□□ -0.33
SEMA6D-215ENST00000560636 TOPBP1Q92547 1522 aa12.98□□□□□ -0.33
SEMA6D-215ENST00000560636 SUPT5HO00267 1087 aaKnown RBP12.97□□□□□ -0.33
SEMA6D-215ENST00000560636 LSM11P83369 360 aaKnown RBP eCLIP12.97□□□□□ -0.33
SEMA6D-215ENST00000560636 POTEEQ6S8J3 1075 aa12.97□□□□□ -0.33
SEMA6D-215ENST00000560636 ANKRD13DQ6ZTN6 518 aa12.97□□□□□ -0.33
SEMA6D-215ENST00000560636 IFT140Q96RY7 1462 aa12.97□□□□□ -0.33
SEMA6D-215ENST00000560636 KCNH8Q96L42 1107 aa12.96□□□□□ -0.33
SEMA6D-215ENST00000560636 HAP1P54257 671 aaPredicted RBP12.95□□□□□ -0.34
SEMA6D-215ENST00000560636 SPDYE16A6NNV3 312 aaPredicted RBP12.93□□□□□ -0.34
SEMA6D-215ENST00000560636 ZDHHC16Q969W1 377 aa12.93□□□□□ -0.34
SEMA6D-215ENST00000560636 DNMBPQ6XZF7 1577 aa12.93□□□□□ -0.34
SEMA6D-215ENST00000560636 PSEN2P49810 448 aa12.92□□□□□ -0.34
SEMA6D-215ENST00000560636 PDIA6Q15084 440 aa12.92□□□□□ -0.34
SEMA6D-215ENST00000560636 KCNK17Q96T54 332 aa12.92□□□□□ -0.34
SEMA6D-215ENST00000560636 ARIH1Q9Y4X5 557 aaPredicted RBP12.92□□□□□ -0.34
SEMA6D-215ENST00000560636 BCL2L12Q9HB09 334 aa12.91□□□□□ -0.34
SEMA6D-215ENST00000560636 ZNF608Q9ULD9 1512 aaPredicted RBP12.91□□□□□ -0.34
SEMA6D-215ENST00000560636 PHF14O94880 888 aa12.9□□□□□ -0.34
SEMA6D-215ENST00000560636 MMRN1Q13201 1228 aa12.9□□□□□ -0.34
SEMA6D-215ENST00000560636 PCDHGA10Q9Y5H3 936 aa12.9□□□□□ -0.34
SEMA6D-215ENST00000560636 PTPREP23469 700 aa12.88□□□□□ -0.35
SEMA6D-215ENST00000560636 PTGER2P43116 358 aa12.88□□□□□ -0.35
SEMA6D-215ENST00000560636 TYW1BQ6NUM6 668 aa12.88□□□□□ -0.35
SEMA6D-215ENST00000560636 ADAM33Q9BZ11 813 aa12.88□□□□□ -0.35
SEMA6D-215ENST00000560636 DMRTA1Q5VZB9 504 aa12.87□□□□□ -0.35
SEMA6D-215ENST00000560636 DDX12PQ92771 950 aa12.87□□□□□ -0.35
SEMA6D-215ENST00000560636 FBXW7Q969H0 707 aa12.87□□□□□ -0.35
SEMA6D-215ENST00000560636 EPAS1Q99814 870 aa12.86□□□□□ -0.35
SEMA6D-215ENST00000560636 POLA1P09884 1462 aaPredicted RBP12.85□□□□□ -0.35
SEMA6D-215ENST00000560636 SOGA1O94964 1423 aa12.85□□□□□ -0.35
SEMA6D-215ENST00000560636 AQRO60306 1485 aaKnown RBP eCLIP12.85□□□□□ -0.35
SEMA6D-215ENST00000560636 ADGRD1Q6QNK2 874 aa12.84□□□□□ -0.35
SEMA6D-215ENST00000560636 KCNV2Q8TDN2 545 aa12.84□□□□□ -0.35
SEMA6D-215ENST00000560636 ARHGEF1Q92888 912 aaKnown RBP12.84□□□□□ -0.35
SEMA6D-215ENST00000560636 TARBP1Q13395 1621 aaKnown RBP12.84□□□□□ -0.35
SEMA6D-215ENST00000560636 TK2O00142 265 aa12.83□□□□□ -0.36
SEMA6D-215ENST00000560636 P3H3Q8IVL6 736 aa12.82□□□□□ -0.36
SEMA6D-215ENST00000560636 MYT1LQ9UL68 1186 aa12.82□□□□□ -0.36
SEMA6D-215ENST00000560636 EIF4G3O43432 1585 aaKnown RBP12.81□□□□□ -0.36
SEMA6D-215ENST00000560636 RAD54L2Q9Y4B4 1467 aa12.81□□□□□ -0.36
SEMA6D-215ENST00000560636 NBR1Q14596 966 aa12.81□□□□□ -0.36
SEMA6D-215ENST00000560636 TDRD9Q8NDG6 1382 aaKnown RBP12.8□□□□□ -0.36
SEMA6D-215ENST00000560636 GRXCR2A6NFK2 248 aa12.79□□□□□ -0.36
SEMA6D-215ENST00000560636 RBM33Q96EV2 1170 aaKnown RBP12.79□□□□□ -0.36
SEMA6D-215ENST00000560636 FGD5Q6ZNL6 1462 aa12.78□□□□□ -0.36
SEMA6D-215ENST00000560636 CUX1P39880 1505 aa12.78□□□□□ -0.36
SEMA6D-215ENST00000560636 C6orf132Q5T0Z8 1188 aa12.76□□□□□ -0.37
SEMA6D-215ENST00000560636 RNF166Q96A37 237 aaPredicted RBP12.76□□□□□ -0.37
SEMA6D-215ENST00000560636 STAC3Q96MF2 364 aa12.76□□□□□ -0.37
SEMA6D-215ENST00000560636 SLC4A5Q9BY07 1137 aa12.76□□□□□ -0.37
SEMA6D-215ENST00000560636 VPS9D1Q9Y2B5 631 aa12.76□□□□□ -0.37
SEMA6D-215ENST00000560636 PPP1R3GB7ZBB8 358 aa12.75□□□□□ -0.37
SEMA6D-215ENST00000560636 MAP3K7O43318 606 aa12.74□□□□□ -0.37
SEMA6D-215ENST00000560636 EN1Q05925 392 aaPredicted RBP12.74□□□□□ -0.37
SEMA6D-215ENST00000560636 CHMP7Q8WUX9 453 aaPredicted RBP12.74□□□□□ -0.37
SEMA6D-215ENST00000560636 ZBED2Q9BTP6 218 aa12.74□□□□□ -0.37
SEMA6D-215ENST00000560636 HRO43593 1189 aa12.73□□□□□ -0.37
SEMA6D-215ENST00000560636 COL9A1P20849 921 aa12.72□□□□□ -0.37
SEMA6D-215ENST00000560636 KDM2AQ9Y2K7 1162 aa12.72□□□□□ -0.37
SEMA6D-215ENST00000560636 WDR97A6NE52 1622 aa12.72□□□□□ -0.37
SEMA6D-215ENST00000560636 VSIG10Q8N0Z9 540 aa12.71□□□□□ -0.37
SEMA6D-215ENST00000560636 CHD1O14646 1710 aa12.71□□□□□ -0.38
SEMA6D-215ENST00000560636 RIMBP3CA6NJZ7 1639 aa12.7□□□□□ -0.38
SEMA6D-215ENST00000560636 RIMBP3BA6NNM3 1639 aa12.7□□□□□ -0.38
SEMA6D-215ENST00000560636 RIMBP3Q9UFD9 1639 aa12.7□□□□□ -0.38
SEMA6D-215ENST00000560636 GRIN2BQ13224 1484 aa12.7□□□□□ -0.38
SEMA6D-215ENST00000560636 ARHGEF11O15085 1522 aa12.69□□□□□ -0.38
SEMA6D-215ENST00000560636 CYB5RLQ6IPT4 315 aa12.69□□□□□ -0.38
SEMA6D-215ENST00000560636 SNAPC4Q5SXM2 1469 aa12.68□□□□□ -0.38
SEMA6D-215ENST00000560636 OSBPP22059 807 aa12.68□□□□□ -0.38
SEMA6D-215ENST00000560636 TSR1Q2NL82 804 aaKnown RBP12.68□□□□□ -0.38
SEMA6D-215ENST00000560636 GAPVD1Q14C86 1478 aa12.67□□□□□ -0.38
SEMA6D-215ENST00000560636 MAGI1Q96QZ7 1491 aaPredicted RBP12.67□□□□□ -0.38
SEMA6D-215ENST00000560636 WRNQ14191 1432 aaPredicted RBP eCLIP12.67□□□□□ -0.38
SEMA6D-215ENST00000560636 PROX2Q3B8N5 592 aa12.66□□□□□ -0.38
SEMA6D-215ENST00000560636 MLLT3P42568 568 aaPredicted RBP12.65□□□□□ -0.38
SEMA6D-215ENST00000560636 PRIM1P49642 420 aaKnown RBP12.65□□□□□ -0.38
SEMA6D-215ENST00000560636 ABCA10Q8WWZ4 1543 aa12.65□□□□□ -0.38
SEMA6D-215ENST00000560636 NBPF3Q9H094 633 aa12.64□□□□□ -0.39
SEMA6D-215ENST00000560636 BHMG1C9JSJ3 638 aaPredicted RBP12.63□□□□□ -0.39
SEMA6D-215ENST00000560636 MRPL50Q8N5N7 158 aaKnown RBP12.63□□□□□ -0.39
SEMA6D-215ENST00000560636 RABGEF1Q9UJ41 708 aa12.63□□□□□ -0.39
SEMA6D-215ENST00000560636 SYNJ2O15056 1496 aa12.63□□□□□ -0.39
SEMA6D-215ENST00000560636 SEMA3EO15041 775 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms