RNA–Protein interactions for RNA: ENST00000560636.5

SEMA6D-215, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-215ENST00000560636 AEBP2Q6ZN18 517 aaPredicted RBP29.89■■■□□ 2.38
SEMA6D-215ENST00000560636 CHIC1Q5VXU3 224 aa28.91■■■□□ 2.22
SEMA6D-215ENST00000560636 SENP3Q9H4L4 574 aaPredicted RBP25.48■■□□□ 1.67
SEMA6D-215ENST00000560636 PHF23Q9BUL5 403 aaPredicted RBP25.36■■□□□ 1.65
SEMA6D-215ENST00000560636 FOXD1Q16676 465 aa23.66■■□□□ 1.38
SEMA6D-215ENST00000560636 PLPPR3Q6T4P5 718 aa23.37■■□□□ 1.33
SEMA6D-215ENST00000560636 PPP6R1Q9UPN7 881 aa22.49■■□□□ 1.19
SEMA6D-215ENST00000560636 ADRA2BP18089 450 aa22.48■■□□□ 1.19
SEMA6D-215ENST00000560636 PIAS4Q8N2W9 510 aaPredicted RBP22.27■■□□□ 1.16
SEMA6D-215ENST00000560636 MSH5O43196 834 aa21.99■■□□□ 1.11
SEMA6D-215ENST00000560636 SCAF1Q9H7N4 1312 aaKnown RBP20.64■□□□□ 0.89
SEMA6D-215ENST00000560636 POTEDQ86YR6 584 aa20.55■□□□□ 0.88
SEMA6D-215ENST00000560636 PPP4R3CPQ6ZMV5 832 aa20.54■□□□□ 0.88
SEMA6D-215ENST00000560636 MAPK8IP2Q13387 824 aaPredicted RBP20.48■□□□□ 0.87
SEMA6D-215ENST00000560636 DMRT2Q9Y5R5 561 aa20.27■□□□□ 0.84
SEMA6D-215ENST00000560636 CNKSR2Q8WXI2 1034 aa20.05■□□□□ 0.8
SEMA6D-215ENST00000560636 NCBP3Q53F19 620 aaKnown RBP19.95■□□□□ 0.78
SEMA6D-215ENST00000560636 RNF216Q9NWF9 866 aaPredicted RBP19.73■□□□□ 0.75
SEMA6D-215ENST00000560636 HOXD11P31277 338 aaPredicted RBP19.71■□□□□ 0.75
SEMA6D-215ENST00000560636 KCNA4P22459 653 aa19.68■□□□□ 0.74
SEMA6D-215ENST00000560636 NPM3O75607 178 aaKnown RBP19.6■□□□□ 0.73
SEMA6D-215ENST00000560636 DCAF8L1A6NGE4 600 aa19.48■□□□□ 0.71
SEMA6D-215ENST00000560636 DNAJC5BQ9UF47 199 aa19.05■□□□□ 0.64
SEMA6D-215ENST00000560636 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.85■□□□□ 0.61
SEMA6D-215ENST00000560636 RNF39Q9H2S5 420 aa18.77■□□□□ 0.6
SEMA6D-215ENST00000560636 SLC4A1APQ9BWU0 796 aaKnown RBP18.71■□□□□ 0.59
SEMA6D-215ENST00000560636 SLC4A2P04920 1241 aa18.57■□□□□ 0.56
SEMA6D-215ENST00000560636 CACNB1Q02641 598 aaPredicted RBP18.57■□□□□ 0.56
SEMA6D-215ENST00000560636 C1QBPQ07021 282 aaKnown RBP18.56■□□□□ 0.56
SEMA6D-215ENST00000560636 U3KPZ7 1027 aaPredicted RBP18.45■□□□□ 0.54
SEMA6D-215ENST00000560636 FOXD4L1Q9NU39 408 aa18.23■□□□□ 0.51
SEMA6D-215ENST00000560636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.17■□□□□ 0.5
SEMA6D-215ENST00000560636 HNRNPUL2Q1KMD3 747 aaKnown RBP18.17■□□□□ 0.5
SEMA6D-215ENST00000560636 MYCNP04198 464 aaPredicted RBP18.15■□□□□ 0.5
SEMA6D-215ENST00000560636 APLP2Q06481 763 aa18.08■□□□□ 0.48
SEMA6D-215ENST00000560636 SAMD1Q6SPF0 538 aaPredicted RBP18.08■□□□□ 0.48
SEMA6D-215ENST00000560636 ZBTB22O15209 634 aa18.07■□□□□ 0.48
SEMA6D-215ENST00000560636 SPINK5Q9NQ38 1064 aaPredicted RBP18.04■□□□□ 0.48
SEMA6D-215ENST00000560636 CAPN15O75808 1086 aa18.03■□□□□ 0.48
SEMA6D-215ENST00000560636 TRHP20396 242 aaPredicted RBP17.86■□□□□ 0.45
SEMA6D-215ENST00000560636 ZNF219Q9P2Y4 722 aaPredicted RBP17.84■□□□□ 0.45
SEMA6D-215ENST00000560636 EHMT2Q96KQ7 1210 aa17.82■□□□□ 0.44
SEMA6D-215ENST00000560636 DSG3P32926 999 aa17.75■□□□□ 0.43
SEMA6D-215ENST00000560636 CSRNP3Q8WYN3 585 aa17.72■□□□□ 0.43
SEMA6D-215ENST00000560636 NISCHQ9Y2I1 1504 aa17.67■□□□□ 0.42
SEMA6D-215ENST00000560636 ATF5Q9Y2D1 282 aaPredicted RBP17.64■□□□□ 0.41
SEMA6D-215ENST00000560636 ABCB7O75027 752 aa17.63■□□□□ 0.41
SEMA6D-215ENST00000560636 ATXN8OSP0DMR3 200 aa17.62■□□□□ 0.41
SEMA6D-215ENST00000560636 POLA2Q14181 598 aa17.49■□□□□ 0.39
SEMA6D-215ENST00000560636 ZBTB12Q9Y330 459 aaPredicted RBP17.2■□□□□ 0.34
SEMA6D-215ENST00000560636 FBLN2P98095 1184 aa17■□□□□ 0.31
SEMA6D-215ENST00000560636 RBM42Q9BTD8 480 aaKnown RBP16.98■□□□□ 0.31
SEMA6D-215ENST00000560636 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
SEMA6D-215ENST00000560636 MKRN4PQ13434 485 aaPredicted RBP16.86■□□□□ 0.29
SEMA6D-215ENST00000560636 SPDYE2BA6NHP3 402 aa16.68■□□□□ 0.26
SEMA6D-215ENST00000560636 SPDYE6P0CI01 402 aa16.68■□□□□ 0.26
SEMA6D-215ENST00000560636 SPDYE2Q495Y8 402 aa16.68■□□□□ 0.26
SEMA6D-215ENST00000560636 AKT1S1Q96B36 256 aa16.68■□□□□ 0.26
SEMA6D-215ENST00000560636 ZNF692Q9BU19 519 aaPredicted RBP16.58■□□□□ 0.24
SEMA6D-215ENST00000560636 REM2Q8IYK8 340 aaPredicted RBP16.51■□□□□ 0.23
SEMA6D-215ENST00000560636 SSUH2Q9Y2M2 353 aa16.48■□□□□ 0.23
SEMA6D-215ENST00000560636 SPDYE4A6NLX3 237 aa16.38■□□□□ 0.21
SEMA6D-215ENST00000560636 CHRDL2Q6WN34 429 aa16.37■□□□□ 0.21
SEMA6D-215ENST00000560636 PABPN1Q86U42 306 aaKnown RBP eCLIP16.34■□□□□ 0.21
SEMA6D-215ENST00000560636 PITPNM1O00562 1244 aa16.32■□□□□ 0.2
SEMA6D-215ENST00000560636 SPDYE1Q8NFV5 336 aaPredicted RBP16.28■□□□□ 0.2
SEMA6D-215ENST00000560636 CLEC11AQ9Y240 323 aa16.24■□□□□ 0.19
SEMA6D-215ENST00000560636 POTEHQ6S545 545 aa16.22■□□□□ 0.19
SEMA6D-215ENST00000560636 FKBP8Q14318 412 aa16.08■□□□□ 0.16
SEMA6D-215ENST00000560636 PIP4P2Q8N4L2 257 aa16.08■□□□□ 0.16
SEMA6D-215ENST00000560636 FXR2P51116 673 aaKnown RBP eCLIP16.07■□□□□ 0.16
SEMA6D-215ENST00000560636 PRR29P0C7W0 189 aa16.05■□□□□ 0.16
SEMA6D-215ENST00000560636 STAG3Q9UJ98 1225 aa16.03■□□□□ 0.16
SEMA6D-215ENST00000560636 PROM2Q8N271 834 aa16■□□□□ 0.15
SEMA6D-215ENST00000560636 PRKAR2AP13861 404 aaKnown RBP15.93■□□□□ 0.14
SEMA6D-215ENST00000560636 CHADLQ6NUI6 762 aa15.84■□□□□ 0.13
SEMA6D-215ENST00000560636 CCDC180Q9P1Z9 1646 aa15.78■□□□□ 0.12
SEMA6D-215ENST00000560636 ABCC9O60706 1549 aa15.73■□□□□ 0.11
SEMA6D-215ENST00000560636 CREBZFQ9NS37 354 aa15.71■□□□□ 0.11
SEMA6D-215ENST00000560636 HAX1O00165 279 aa15.7■□□□□ 0.1
SEMA6D-215ENST00000560636 FARP1Q9Y4F1 1045 aaPredicted RBP15.67■□□□□ 0.1
SEMA6D-215ENST00000560636 FBXO3Q9UK99 471 aa15.63■□□□□ 0.09
SEMA6D-215ENST00000560636 MIER1Q8N108 512 aa15.59■□□□□ 0.09
SEMA6D-215ENST00000560636 PLEKHG5O94827 1062 aa15.58■□□□□ 0.08
SEMA6D-215ENST00000560636 PLCD3Q8N3E9 789 aa15.54■□□□□ 0.08
SEMA6D-215ENST00000560636 C19orf67A6NJJ6 358 aa15.53■□□□□ 0.08
SEMA6D-215ENST00000560636 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
SEMA6D-215ENST00000560636 MNX1P50219 401 aaPredicted RBP15.48■□□□□ 0.07
SEMA6D-215ENST00000560636 EVX2Q03828 476 aa15.47■□□□□ 0.07
SEMA6D-215ENST00000560636 CD44P16070 742 aaKnown RBP15.46■□□□□ 0.07
SEMA6D-215ENST00000560636 SP7Q8TDD2 431 aaPredicted RBP15.45■□□□□ 0.06
SEMA6D-215ENST00000560636 ZBTB47Q9UFB7 747 aaPredicted RBP15.4■□□□□ 0.06
SEMA6D-215ENST00000560636 VASPP50552 380 aaPredicted RBP15.39■□□□□ 0.05
SEMA6D-215ENST00000560636 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
SEMA6D-215ENST00000560636 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
SEMA6D-215ENST00000560636 KLHL34Q8N239 644 aa15.26■□□□□ 0.03
SEMA6D-215ENST00000560636 ZNF579Q8NAF0 562 aaKnown RBP15.22■□□□□ 0.03
SEMA6D-215ENST00000560636 TSPYL2Q9H2G4 693 aaPredicted RBP15.22■□□□□ 0.03
SEMA6D-215ENST00000560636 GABBR2O75899 941 aa15.19■□□□□ 0.02
SEMA6D-215ENST00000560636 RASEFQ8IZ41 740 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms