RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 PARD3Q8TEW0 1356 aa14.62□□□□□ -0.07
PCAT29-201ENST00000558411 SENP3-EIF4A1A0A087X0R7 540 aa14.61□□□□□ -0.07
PCAT29-201ENST00000558411 RRAGDQ9NQL2 400 aaPredicted RBP14.61□□□□□ -0.07
PCAT29-201ENST00000558411 ARHGEF12Q9NZN5 1544 aa14.6□□□□□ -0.07
PCAT29-201ENST00000558411 GAPVD1Q14C86 1478 aa14.59□□□□□ -0.07
PCAT29-201ENST00000558411 RRP9O43818 475 aaKnown RBP14.59□□□□□ -0.07
PCAT29-201ENST00000558411 KIAA1107Q9UPP5 1409 aa14.59□□□□□ -0.07
PCAT29-201ENST00000558411 ABCC5O15440 1437 aa14.59□□□□□ -0.07
PCAT29-201ENST00000558411 EPRSP07814 1512 aaKnown RBP14.58□□□□□ -0.07
PCAT29-201ENST00000558411 PLIN1O60240 522 aa14.57□□□□□ -0.08
PCAT29-201ENST00000558411 SKAP1Q86WV1 359 aa14.57□□□□□ -0.08
PCAT29-201ENST00000558411 CDCA7LQ96GN5 454 aa14.57□□□□□ -0.08
PCAT29-201ENST00000558411 ADGBQ8N7X0 1667 aa14.56□□□□□ -0.08
PCAT29-201ENST00000558411 ZMYND15Q9H091 742 aa14.55□□□□□ -0.08
PCAT29-201ENST00000558411 CLCN1P35523 988 aa14.54□□□□□ -0.08
PCAT29-201ENST00000558411 TARBP1Q13395 1621 aaKnown RBP14.54□□□□□ -0.08
PCAT29-201ENST00000558411 POGKQ9P215 609 aa14.54□□□□□ -0.08
PCAT29-201ENST00000558411 HSP90AA2PQ14568 343 aaPredicted RBP14.53□□□□□ -0.08
PCAT29-201ENST00000558411 VSIG10Q8N0Z9 540 aa14.53□□□□□ -0.08
PCAT29-201ENST00000558411 HSP90AA1P07900 732 aaKnown RBP14.52□□□□□ -0.09
PCAT29-201ENST00000558411 BECN1Q14457 450 aa14.52□□□□□ -0.09
PCAT29-201ENST00000558411 CARD11Q9BXL7 1154 aa14.52□□□□□ -0.09
PCAT29-201ENST00000558411 PNNQ9H307 717 aaKnown RBP14.52□□□□□ -0.09
PCAT29-201ENST00000558411 ZNF608Q9ULD9 1512 aaPredicted RBP14.5□□□□□ -0.09
PCAT29-201ENST00000558411 C20orf194Q5TEA3 1177 aa14.5□□□□□ -0.09
PCAT29-201ENST00000558411 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.5□□□□□ -0.09
PCAT29-201ENST00000558411 TDRD9Q8NDG6 1382 aaKnown RBP14.5□□□□□ -0.09
PCAT29-201ENST00000558411 NAP1L5Q96NT1 182 aaPredicted RBP14.5□□□□□ -0.09
PCAT29-201ENST00000558411 DNAJC5Q9H3Z4 198 aa14.5□□□□□ -0.09
PCAT29-201ENST00000558411 EIF3AQ14152 1382 aaKnown RBP14.49□□□□□ -0.09
PCAT29-201ENST00000558411 ZNF326Q5BKZ1 582 aaKnown RBP14.49□□□□□ -0.09
PCAT29-201ENST00000558411 FSD2A1L4K1 749 aa14.48□□□□□ -0.09
PCAT29-201ENST00000558411 CDK13Q14004 1512 aaKnown RBP14.48□□□□□ -0.09
PCAT29-201ENST00000558411 ADGRL2O95490 1459 aa14.48□□□□□ -0.09
PCAT29-201ENST00000558411 USP19O94966 1318 aa14.48□□□□□ -0.09
PCAT29-201ENST00000558411 ST20-MTHFSA0A0A6YYL1 179 aa14.48□□□□□ -0.09
PCAT29-201ENST00000558411 CLASP1Q7Z460 1538 aa14.46□□□□□ -0.09
PCAT29-201ENST00000558411 GOLGA6L3A6NEY3 463 aa14.46□□□□□ -0.09
PCAT29-201ENST00000558411 PER1O15534 1290 aaPredicted RBP14.46□□□□□ -0.09
PCAT29-201ENST00000558411 CROCC2H7BZ55 1655 aa14.46□□□□□ -0.09
PCAT29-201ENST00000558411 ANTXR1Q9H6X2 564 aa14.45□□□□□ -0.1
PCAT29-201ENST00000558411 CEP170Q5SW79 1584 aa14.45□□□□□ -0.1
PCAT29-201ENST00000558411 XRCC6P12956 609 aaKnown RBP eCLIP14.45□□□□□ -0.1
PCAT29-201ENST00000558411 IFT140Q96RY7 1462 aa14.44□□□□□ -0.1
PCAT29-201ENST00000558411 KIAA0586Q9BVV6 1533 aa14.44□□□□□ -0.1
PCAT29-201ENST00000558411 NLRP1Q9C000 1473 aa14.43□□□□□ -0.1
PCAT29-201ENST00000558411 RGS3P49796 1198 aa14.43□□□□□ -0.1
PCAT29-201ENST00000558411 PKD2Q13563 968 aa14.43□□□□□ -0.1
PCAT29-201ENST00000558411 DUSP27Q5VZP5 1158 aa14.43□□□□□ -0.1
PCAT29-201ENST00000558411 LAMC1P11047 1609 aa14.43□□□□□ -0.1
PCAT29-201ENST00000558411 MAPK8IP3Q9UPT6 1336 aa14.43□□□□□ -0.1
PCAT29-201ENST00000558411 ZMYM3Q14202 1370 aa14.43□□□□□ -0.1
PCAT29-201ENST00000558411 ITSN2Q9NZM3 1697 aa14.42□□□□□ -0.1
PCAT29-201ENST00000558411 KDM5DQ9BY66 1539 aa14.42□□□□□ -0.1
PCAT29-201ENST00000558411 TRPM1Q7Z4N2 1603 aa14.42□□□□□ -0.1
PCAT29-201ENST00000558411 CCDC144AA2RUR9 1427 aa14.41□□□□□ -0.1
PCAT29-201ENST00000558411 ISY1Q9ULR0 285 aaKnown RBP14.41□□□□□ -0.1
PCAT29-201ENST00000558411 ZNF521Q96K83 1311 aa14.41□□□□□ -0.1
PCAT29-201ENST00000558411 COL17A1Q9UMD9 1497 aaPredicted RBP14.41□□□□□ -0.1
PCAT29-201ENST00000558411 EIF4G3O43432 1585 aaKnown RBP14.41□□□□□ -0.1
PCAT29-201ENST00000558411 CENPJQ9HC77 1338 aaPredicted RBP14.41□□□□□ -0.1
PCAT29-201ENST00000558411 IQGAP2Q13576 1575 aa14.4□□□□□ -0.1
PCAT29-201ENST00000558411 MRE11P49959 708 aa14.39□□□□□ -0.11
PCAT29-201ENST00000558411 CAMSAP2Q08AD1 1489 aa14.39□□□□□ -0.11
PCAT29-201ENST00000558411 TPM2P07951 284 aa14.38□□□□□ -0.11
PCAT29-201ENST00000558411 PBRM1Q86U86 1689 aa14.38□□□□□ -0.11
PCAT29-201ENST00000558411 GOLGA2Q08379 1002 aa14.38□□□□□ -0.11
PCAT29-201ENST00000558411 SLKQ9H2G2 1235 aaPredicted RBP14.38□□□□□ -0.11
PCAT29-201ENST00000558411 PLEKHH1Q9ULM0 1364 aa14.37□□□□□ -0.11
PCAT29-201ENST00000558411 ANKRD30AQ9BXX3 1397 aa14.37□□□□□ -0.11
PCAT29-201ENST00000558411 NINLQ9Y2I6 1382 aa14.37□□□□□ -0.11
PCAT29-201ENST00000558411 ZNF644Q9H582 1327 aaPredicted RBP14.36□□□□□ -0.11
PCAT29-201ENST00000558411 MCM4P33991 863 aa14.36□□□□□ -0.11
PCAT29-201ENST00000558411 GPRASP1Q5JY77 1395 aa14.35□□□□□ -0.11
PCAT29-201ENST00000558411 TRMT2AQ8IZ69 625 aaKnown RBP14.35□□□□□ -0.11
PCAT29-201ENST00000558411 UPF2Q9HAU5 1272 aaKnown RBP14.35□□□□□ -0.11
PCAT29-201ENST00000558411 PDCL3Q9H2J4 239 aa14.35□□□□□ -0.11
PCAT29-201ENST00000558411 ANKRD50Q9ULJ7 1429 aa14.34□□□□□ -0.11
PCAT29-201ENST00000558411 PRDM15P57071 1507 aaPredicted RBP14.34□□□□□ -0.11
PCAT29-201ENST00000558411 CGNL1Q0VF96 1302 aa14.34□□□□□ -0.11
PCAT29-201ENST00000558411 NKTRP30414 1462 aaKnown RBP14.34□□□□□ -0.11
PCAT29-201ENST00000558411 ESPNB1AK53 854 aa14.34□□□□□ -0.11
PCAT29-201ENST00000558411 SLFN5Q08AF3 891 aa14.34□□□□□ -0.11
PCAT29-201ENST00000558411 ADAMTS8Q9UP79 889 aa14.34□□□□□ -0.11
PCAT29-201ENST00000558411 PRAG1Q86YV5 1406 aa14.34□□□□□ -0.11
PCAT29-201ENST00000558411 TBC1D32Q96NH3 1257 aa14.33□□□□□ -0.11
PCAT29-201ENST00000558411 PANK2Q9BZ23 570 aa14.33□□□□□ -0.11
PCAT29-201ENST00000558411 SEC24BO95487 1268 aa14.33□□□□□ -0.12
PCAT29-201ENST00000558411 CC2D1BQ5T0F9 858 aaKnown RBP14.33□□□□□ -0.12
PCAT29-201ENST00000558411 TBC1D2Q9BYX2 928 aa14.32□□□□□ -0.12
PCAT29-201ENST00000558411 MYH16Q9H6N6 1097 aa14.32□□□□□ -0.12
PCAT29-201ENST00000558411 PTPRGP23470 1445 aa14.32□□□□□ -0.12
PCAT29-201ENST00000558411 ADCY10Q96PN6 1610 aa14.32□□□□□ -0.12
PCAT29-201ENST00000558411 PDE3AQ14432 1141 aa14.32□□□□□ -0.12
PCAT29-201ENST00000558411 SHANK2Q9UPX8 1470 aa14.31□□□□□ -0.12
PCAT29-201ENST00000558411 PLXNC1O60486 1568 aa14.31□□□□□ -0.12
PCAT29-201ENST00000558411 IGHDP01880 384 aa14.31□□□□□ -0.12
PCAT29-201ENST00000558411 AAMPQ13685 434 aa14.31□□□□□ -0.12
PCAT29-201ENST00000558411 TRAK2O60296 914 aa14.3□□□□□ -0.12
PCAT29-201ENST00000558411 WDR43Q15061 677 aaKnown RBP eCLIP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms