RNA–Protein interactions for RNA: ENST00000557410.5

SV2B-206, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 1 (best)

Gene SV2B, Length 4,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-206ENST00000557410 B4GALNT3Q6L9W6 998 aa10.52□□□□□ -0.73
SV2B-206ENST00000557410 ERICH6BQ5W0A0 696 aa10.52□□□□□ -0.73
SV2B-206ENST00000557410 PLPPR3Q6T4P5 718 aa10.52□□□□□ -0.73
SV2B-206ENST00000557410 BCORL1Q5H9F3 1711 aa10.51□□□□□ -0.73
SV2B-206ENST00000557410 PPP4R2Q9NY27 417 aa10.51□□□□□ -0.73
SV2B-206ENST00000557410 ARID4BQ4LE39 1312 aaPredicted RBP10.51□□□□□ -0.73
SV2B-206ENST00000557410 CYB5RLQ6IPT4 315 aa10.51□□□□□ -0.73
SV2B-206ENST00000557410 DHX29Q7Z478 1369 aaKnown RBP10.51□□□□□ -0.73
SV2B-206ENST00000557410 KDM5CP41229 1560 aa10.5□□□□□ -0.73
SV2B-206ENST00000557410 RALGAPBQ86X10 1494 aa10.5□□□□□ -0.73
SV2B-206ENST00000557410 UHRF1BP1Q6BDS2 1440 aa10.5□□□□□ -0.73
SV2B-206ENST00000557410 ST20-MTHFSA0A0A6YYL1 179 aa10.49□□□□□ -0.73
SV2B-206ENST00000557410 CCDC141Q6ZP82 1450 aa10.49□□□□□ -0.73
SV2B-206ENST00000557410 ROCK2O75116 1388 aaKnown RBP10.49□□□□□ -0.73
SV2B-206ENST00000557410 RSPH4AQ5TD94 716 aa10.49□□□□□ -0.73
SV2B-206ENST00000557410 ARHGEF5Q12774 1597 aa10.49□□□□□ -0.73
SV2B-206ENST00000557410 ARHGEF12Q9NZN5 1544 aa10.48□□□□□ -0.73
SV2B-206ENST00000557410 EFCAB2Q5VUJ9 269 aa10.48□□□□□ -0.73
SV2B-206ENST00000557410 KDM5DQ9BY66 1539 aa10.48□□□□□ -0.73
SV2B-206ENST00000557410 SAMD9LQ8IVG5 1584 aa10.47□□□□□ -0.73
SV2B-206ENST00000557410 ARHGAP5Q13017 1502 aa10.46□□□□□ -0.73
SV2B-206ENST00000557410 CDC42BPBQ9Y5S2 1711 aa10.46□□□□□ -0.73
SV2B-206ENST00000557410 CCDC144AA2RUR9 1427 aa10.46□□□□□ -0.74
SV2B-206ENST00000557410 FAM135AQ9P2D6 1515 aa10.46□□□□□ -0.74
SV2B-206ENST00000557410 PREX2Q70Z35 1606 aa10.45□□□□□ -0.74
SV2B-206ENST00000557410 SYCP2Q9BX26 1530 aa10.44□□□□□ -0.74
SV2B-206ENST00000557410 NUDCQ9Y266 331 aa10.44□□□□□ -0.74
SV2B-206ENST00000557410 CHD1O14646 1710 aa10.43□□□□□ -0.74
SV2B-206ENST00000557410 PNISRQ8TF01 805 aaKnown RBP10.43□□□□□ -0.74
SV2B-206ENST00000557410 ARXQ96QS3 562 aa10.43□□□□□ -0.74
SV2B-206ENST00000557410 SMG6Q86US8 1419 aaKnown RBP10.43□□□□□ -0.74
SV2B-206ENST00000557410 RALBP1Q15311 655 aa10.42□□□□□ -0.74
SV2B-206ENST00000557410 MYBBP1AQ9BQG0 1328 aaKnown RBP10.42□□□□□ -0.74
SV2B-206ENST00000557410 TTC37Q6PGP7 1564 aa10.41□□□□□ -0.74
SV2B-206ENST00000557410 WDR43Q15061 677 aaKnown RBP eCLIP10.41□□□□□ -0.74
SV2B-206ENST00000557410 NBPF1Q3BBV0 1214 aa10.41□□□□□ -0.74
SV2B-206ENST00000557410 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.4□□□□□ -0.74
SV2B-206ENST00000557410 NOP58Q9Y2X3 529 aaKnown RBP10.4□□□□□ -0.74
SV2B-206ENST00000557410 PRAG1Q86YV5 1406 aa10.4□□□□□ -0.74
SV2B-206ENST00000557410 LAS1LQ9Y4W2 734 aaKnown RBP10.4□□□□□ -0.75
SV2B-206ENST00000557410 BRD4O60885 1362 aaPredicted RBP10.39□□□□□ -0.75
SV2B-206ENST00000557410 PLEKHH2Q8IVE3 1493 aa10.39□□□□□ -0.75
SV2B-206ENST00000557410 KTN1Q86UP2 1357 aaKnown RBP10.39□□□□□ -0.75
SV2B-206ENST00000557410 UPF2Q9HAU5 1272 aaKnown RBP10.39□□□□□ -0.75
SV2B-206ENST00000557410 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.38□□□□□ -0.75
SV2B-206ENST00000557410 MYO5CQ9NQX4 1742 aa10.38□□□□□ -0.75
SV2B-206ENST00000557410 RTN4Q9NQC3 1192 aaKnown RBP10.38□□□□□ -0.75
SV2B-206ENST00000557410 FANCIQ9NVI1 1328 aa10.38□□□□□ -0.75
SV2B-206ENST00000557410 MAST1Q9Y2H9 1570 aa10.38□□□□□ -0.75
SV2B-206ENST00000557410 ABCC2Q92887 1545 aa10.37□□□□□ -0.75
SV2B-206ENST00000557410 UNC13BO14795 1591 aa10.37□□□□□ -0.75
SV2B-206ENST00000557410 TRPM1Q7Z4N2 1603 aa10.37□□□□□ -0.75
SV2B-206ENST00000557410 ERCC6L2Q5T890 1561 aa10.37□□□□□ -0.75
SV2B-206ENST00000557410 NLRP13Q86W25 1043 aa10.37□□□□□ -0.75
SV2B-206ENST00000557410 A2MP01023 1474 aa10.36□□□□□ -0.75
SV2B-206ENST00000557410 PLA2R1Q13018 1463 aa10.36□□□□□ -0.75
SV2B-206ENST00000557410 MSH5O43196 834 aa10.36□□□□□ -0.75
SV2B-206ENST00000557410 DEKP35659 375 aaKnown RBP10.36□□□□□ -0.75
SV2B-206ENST00000557410 SHROOM2Q13796 1616 aa10.36□□□□□ -0.75
SV2B-206ENST00000557410 CC2D1BQ5T0F9 858 aaKnown RBP10.36□□□□□ -0.75
SV2B-206ENST00000557410 DUOX2Q9NRD8 1548 aa10.35□□□□□ -0.75
SV2B-206ENST00000557410 NEFMP07197 916 aa10.35□□□□□ -0.75
SV2B-206ENST00000557410 HSP90AA1P07900 732 aaKnown RBP10.35□□□□□ -0.75
SV2B-206ENST00000557410 PLXNC1O60486 1568 aa10.35□□□□□ -0.75
SV2B-206ENST00000557410 LRPPRCP42704 1394 aaKnown RBP10.35□□□□□ -0.75
SV2B-206ENST00000557410 IQGAP3Q86VI3 1631 aa10.35□□□□□ -0.75
SV2B-206ENST00000557410 TMF1P82094 1093 aa10.34□□□□□ -0.75
SV2B-206ENST00000557410 E9PCH4 1651 aa10.34□□□□□ -0.75
SV2B-206ENST00000557410 KANK1Q14678 1352 aa10.34□□□□□ -0.75
SV2B-206ENST00000557410 SENP3Q9H4L4 574 aaPredicted RBP10.34□□□□□ -0.75
SV2B-206ENST00000557410 MLECQ14165 292 aa10.34□□□□□ -0.75
SV2B-206ENST00000557410 SPAG9O60271 1321 aaKnown RBP10.33□□□□□ -0.76
SV2B-206ENST00000557410 RNF123Q5XPI4 1314 aa10.33□□□□□ -0.76
SV2B-206ENST00000557410 PLCH2O75038 1416 aa10.33□□□□□ -0.76
SV2B-206ENST00000557410 GPRASP1Q5JY77 1395 aa10.33□□□□□ -0.76
SV2B-206ENST00000557410 PANK3Q9H999 370 aa10.33□□□□□ -0.76
SV2B-206ENST00000557410 ERBINQ96RT1 1412 aa10.33□□□□□ -0.76
SV2B-206ENST00000557410 DISP3Q9P2K9 1392 aa10.33□□□□□ -0.76
SV2B-206ENST00000557410 GGT6Q6P531 493 aa10.33□□□□□ -0.76
SV2B-206ENST00000557410 PARD3Q8TEW0 1356 aa10.33□□□□□ -0.76
SV2B-206ENST00000557410 TESK2Q96S53 571 aa10.32□□□□□ -0.76
SV2B-206ENST00000557410 EIF2AK4Q9P2K8 1649 aaKnown RBP10.32□□□□□ -0.76
SV2B-206ENST00000557410 COL17A1Q9UMD9 1497 aaPredicted RBP10.32□□□□□ -0.76
SV2B-206ENST00000557410 PER1O15534 1290 aaPredicted RBP10.32□□□□□ -0.76
SV2B-206ENST00000557410 FAM69CQ0P6D2 419 aa10.31□□□□□ -0.76
SV2B-206ENST00000557410 DDRGK1Q96HY6 314 aa10.31□□□□□ -0.76
SV2B-206ENST00000557410 RGS3P49796 1198 aa10.31□□□□□ -0.76
SV2B-206ENST00000557410 PRDM15P57071 1507 aaPredicted RBP10.31□□□□□ -0.76
SV2B-206ENST00000557410 ZCCHC11Q5TAX3 1644 aaKnown RBP10.31□□□□□ -0.76
SV2B-206ENST00000557410 TRAPPC8Q9Y2L5 1435 aa10.31□□□□□ -0.76
SV2B-206ENST00000557410 SLC24A1O60721 1099 aa10.31□□□□□ -0.76
SV2B-206ENST00000557410 AFAP1Q8N556 730 aa10.3□□□□□ -0.76
SV2B-206ENST00000557410 RCAN3Q9UKA8 241 aa10.3□□□□□ -0.76
SV2B-206ENST00000557410 PPM1GO15355 546 aaPredicted RBP10.3□□□□□ -0.76
SV2B-206ENST00000557410 WASHC2CQ9Y4E1 1318 aa10.3□□□□□ -0.76
SV2B-206ENST00000557410 RRP1P56182 461 aaKnown RBP10.29□□□□□ -0.76
SV2B-206ENST00000557410 LAMC1P11047 1609 aa10.29□□□□□ -0.76
SV2B-206ENST00000557410 PDE3BQ13370 1112 aa10.29□□□□□ -0.76
SV2B-206ENST00000557410 ATP10AO60312 1499 aa10.29□□□□□ -0.76
SV2B-206ENST00000557410 ABCC1P33527 1531 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms