RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 ZNF454Q8N9F8 522 aa10.42□□□□□ -0.74
HIF1A-208ENST00000556237 NESP48681 1621 aa10.42□□□□□ -0.74
HIF1A-208ENST00000556237 VPS9D1Q9Y2B5 631 aa10.41□□□□□ -0.74
HIF1A-208ENST00000556237 BCL2L12Q9HB09 334 aa10.4□□□□□ -0.74
HIF1A-208ENST00000556237 PDE4AP27815 886 aa10.39□□□□□ -0.75
HIF1A-208ENST00000556237 NCKAP5LQ9HCH0 1330 aa10.38□□□□□ -0.75
HIF1A-208ENST00000556237 SLC4A5Q9BY07 1137 aa10.38□□□□□ -0.75
HIF1A-208ENST00000556237 FANCD2Q9BXW9 1451 aa10.37□□□□□ -0.75
HIF1A-208ENST00000556237 FOSBP53539 338 aa10.37□□□□□ -0.75
HIF1A-208ENST00000556237 PDS5BQ9NTI5 1447 aa10.37□□□□□ -0.75
HIF1A-208ENST00000556237 LAMC3Q9Y6N6 1575 aa10.37□□□□□ -0.75
HIF1A-208ENST00000556237 GTPBP6O43824 516 aaPredicted RBP10.36□□□□□ -0.75
HIF1A-208ENST00000556237 PTPREP23469 700 aa10.36□□□□□ -0.75
HIF1A-208ENST00000556237 LOC105371045A0A1W2PR82 267 aa10.34□□□□□ -0.75
HIF1A-208ENST00000556237 JPH4Q96JJ6 628 aa10.34□□□□□ -0.75
HIF1A-208ENST00000556237 ANO8Q9HCE9 1232 aaPredicted RBP10.34□□□□□ -0.75
HIF1A-208ENST00000556237 SYNJ1O43426 1573 aa10.32□□□□□ -0.76
HIF1A-208ENST00000556237 EVI5O60447 810 aa10.32□□□□□ -0.76
HIF1A-208ENST00000556237 PTPN5P54829 565 aa10.32□□□□□ -0.76
HIF1A-208ENST00000556237 DDX27Q96GQ7 796 aaKnown RBP10.32□□□□□ -0.76
HIF1A-208ENST00000556237 PRDM2Q13029 1718 aa10.32□□□□□ -0.76
HIF1A-208ENST00000556237 LARP6Q9BRS8 491 aaKnown RBP10.31□□□□□ -0.76
HIF1A-208ENST00000556237 ZBED2Q9BTP6 218 aa10.31□□□□□ -0.76
HIF1A-208ENST00000556237 CUX1P39880 1505 aa10.31□□□□□ -0.76
HIF1A-208ENST00000556237 CEP164Q9UPV0 1460 aa10.3□□□□□ -0.76
HIF1A-208ENST00000556237 BHMG1C9JSJ3 638 aaPredicted RBP10.3□□□□□ -0.76
HIF1A-208ENST00000556237 ZDHHC16Q969W1 377 aa10.3□□□□□ -0.76
HIF1A-208ENST00000556237 GOLGA8CPA6NN73 597 aa10.29□□□□□ -0.76
HIF1A-208ENST00000556237 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.29□□□□□ -0.76
HIF1A-208ENST00000556237 SOGA1O94964 1423 aa10.29□□□□□ -0.76
HIF1A-208ENST00000556237 TOP2BQ02880 1626 aa10.29□□□□□ -0.76
HIF1A-208ENST00000556237 THSD4Q6ZMP0 1018 aa10.28□□□□□ -0.76
HIF1A-208ENST00000556237 PAXIP1Q6ZW49 1069 aaPredicted RBP10.28□□□□□ -0.76
HIF1A-208ENST00000556237 MRPL50Q8N5N7 158 aaKnown RBP10.28□□□□□ -0.76
HIF1A-208ENST00000556237 ADAM33Q9BZ11 813 aa10.28□□□□□ -0.76
HIF1A-208ENST00000556237 MAP3K9P80192 1104 aa10.27□□□□□ -0.77
HIF1A-208ENST00000556237 MFSD10Q14728 455 aa10.27□□□□□ -0.77
HIF1A-208ENST00000556237 SPRYD3Q8NCJ5 442 aa10.27□□□□□ -0.77
HIF1A-208ENST00000556237 WNT2BQ93097 391 aa10.26□□□□□ -0.77
HIF1A-208ENST00000556237 CFAP44Q96MT7 982 aa10.26□□□□□ -0.77
HIF1A-208ENST00000556237 NBPF3Q9H094 633 aa10.26□□□□□ -0.77
HIF1A-208ENST00000556237 BIVM-ERCC5R4GMW8 1640 aa10.25□□□□□ -0.77
HIF1A-208ENST00000556237 RUSC2Q8N2Y8 1516 aa10.25□□□□□ -0.77
HIF1A-208ENST00000556237 PLCB2Q00722 1185 aa10.24□□□□□ -0.77
HIF1A-208ENST00000556237 EEA1Q15075 1411 aa10.24□□□□□ -0.77
HIF1A-208ENST00000556237 ERCC6Q03468 1493 aa10.23□□□□□ -0.77
HIF1A-208ENST00000556237 TOPBP1Q92547 1522 aa10.23□□□□□ -0.77
HIF1A-208ENST00000556237 IFFO2Q5TF58 517 aa10.23□□□□□ -0.77
HIF1A-208ENST00000556237 URB2Q14146 1524 aaKnown RBP10.23□□□□□ -0.77
HIF1A-208ENST00000556237 DNMBPQ6XZF7 1577 aa10.22□□□□□ -0.77
HIF1A-208ENST00000556237 EMILIN3Q9NT22 766 aa10.22□□□□□ -0.77
HIF1A-208ENST00000556237 FGD5Q6ZNL6 1462 aa10.22□□□□□ -0.77
HIF1A-208ENST00000556237 KIF21AQ7Z4S6 1674 aa10.22□□□□□ -0.77
HIF1A-208ENST00000556237 PPP1R3GB7ZBB8 358 aa10.21□□□□□ -0.77
HIF1A-208ENST00000556237 RGS20O76081 388 aa10.2□□□□□ -0.78
HIF1A-208ENST00000556237 PCDHGA10Q9Y5H3 936 aa10.2□□□□□ -0.78
HIF1A-208ENST00000556237 MRC2Q9UBG0 1479 aa10.19□□□□□ -0.78
HIF1A-208ENST00000556237 KIF27Q86VH2 1401 aa10.19□□□□□ -0.78
HIF1A-208ENST00000556237 RAD54L2Q9Y4B4 1467 aa10.18□□□□□ -0.78
HIF1A-208ENST00000556237 FBXW7Q969H0 707 aa10.18□□□□□ -0.78
HIF1A-208ENST00000556237 RABGEF1Q9UJ41 708 aa10.18□□□□□ -0.78
HIF1A-208ENST00000556237 CUX2O14529 1486 aa10.17□□□□□ -0.78
HIF1A-208ENST00000556237 POLA1P09884 1462 aaPredicted RBP10.17□□□□□ -0.78
HIF1A-208ENST00000556237 UBTFP17480 764 aaKnown RBP10.17□□□□□ -0.78
HIF1A-208ENST00000556237 TYW1BQ6NUM6 668 aa10.17□□□□□ -0.78
HIF1A-208ENST00000556237 PHF14O94880 888 aa10.16□□□□□ -0.78
HIF1A-208ENST00000556237 A0A0G2JS52 829 aa10.15□□□□□ -0.78
HIF1A-208ENST00000556237 COL9A1P20849 921 aa10.15□□□□□ -0.78
HIF1A-208ENST00000556237 PROX2Q3B8N5 592 aa10.15□□□□□ -0.78
HIF1A-208ENST00000556237 CADPS2Q86UW7 1296 aa10.15□□□□□ -0.78
HIF1A-208ENST00000556237 ANKK1Q8NFD2 765 aa10.15□□□□□ -0.78
HIF1A-208ENST00000556237 TSHZ2Q9NRE2 1034 aa10.14□□□□□ -0.79
HIF1A-208ENST00000556237 IGF1RP08069 1367 aa10.14□□□□□ -0.79
HIF1A-208ENST00000556237 TDRD9Q8NDG6 1382 aaKnown RBP10.13□□□□□ -0.79
HIF1A-208ENST00000556237 LAPTM4BQ86VI4 370 aa10.12□□□□□ -0.79
HIF1A-208ENST00000556237 ABCA10Q8WWZ4 1543 aa10.12□□□□□ -0.79
HIF1A-208ENST00000556237 CAMK2BQ13554 666 aa10.1□□□□□ -0.79
HIF1A-208ENST00000556237 EPAS1Q99814 870 aa10.1□□□□□ -0.79
HIF1A-208ENST00000556237 WDR62O43379 1518 aa10.1□□□□□ -0.79
HIF1A-208ENST00000556237 KIAA1468Q9P260 1216 aa10.09□□□□□ -0.79
HIF1A-208ENST00000556237 CARMIL1Q5VZK9 1371 aa10.09□□□□□ -0.79
HIF1A-208ENST00000556237 ONECUT3O60422 494 aaPredicted RBP10.08□□□□□ -0.8
HIF1A-208ENST00000556237 BCAMP50895 628 aa10.08□□□□□ -0.8
HIF1A-208ENST00000556237 IRX2Q9BZI1 471 aaPredicted RBP10.08□□□□□ -0.8
HIF1A-208ENST00000556237 TNIKQ9UKE5 1360 aa10.08□□□□□ -0.8
HIF1A-208ENST00000556237 GOLGA3Q08378 1498 aa10.08□□□□□ -0.8
HIF1A-208ENST00000556237 IFT140Q96RY7 1462 aa10.07□□□□□ -0.8
HIF1A-208ENST00000556237 SOWAHBA6NEL2 793 aa10.07□□□□□ -0.8
HIF1A-208ENST00000556237 DPYSL4O14531 572 aa10.07□□□□□ -0.8
HIF1A-208ENST00000556237 ITGBL1O95965 494 aaPredicted RBP10.07□□□□□ -0.8
HIF1A-208ENST00000556237 C6orf132Q5T0Z8 1188 aa10.07□□□□□ -0.8
HIF1A-208ENST00000556237 GAPVD1Q14C86 1478 aa10.06□□□□□ -0.8
HIF1A-208ENST00000556237 PRXQ9BXM0 1461 aa10.06□□□□□ -0.8
HIF1A-208ENST00000556237 NYAP1Q6ZVC0 841 aa10.06□□□□□ -0.8
HIF1A-208ENST00000556237 ZFRQ96KR1 1074 aaKnown RBP10.06□□□□□ -0.8
HIF1A-208ENST00000556237 THOC2Q8NI27 1593 aaKnown RBP10.05□□□□□ -0.8
HIF1A-208ENST00000556237 AQRO60306 1485 aaKnown RBP eCLIP10.05□□□□□ -0.8
HIF1A-208ENST00000556237 RAPGEF2Q9Y4G8 1499 aa10.05□□□□□ -0.8
HIF1A-208ENST00000556237 HAP1P54257 671 aaPredicted RBP10.05□□□□□ -0.8
HIF1A-208ENST00000556237 TARBP1Q13395 1621 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms