RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 COQ9O75208 318 aa5.15□□□□□ -1.58
LRFN5-204ENST00000554171 SCP2P22307 547 aa5.15□□□□□ -1.58
LRFN5-204ENST00000554171 CCDC184Q52MB2 194 aa5.15□□□□□ -1.58
LRFN5-204ENST00000554171 RRAGDQ9NQL2 400 aaPredicted RBP5.15□□□□□ -1.58
LRFN5-204ENST00000554171 NCAPD3P42695 1498 aa5.15□□□□□ -1.59
LRFN5-204ENST00000554171 RGL3Q3MIN7 710 aa5.15□□□□□ -1.59
LRFN5-204ENST00000554171 MAF1Q9H063 256 aa5.15□□□□□ -1.59
LRFN5-204ENST00000554171 SSFA2P28290 1259 aa5.14□□□□□ -1.59
LRFN5-204ENST00000554171 MPNDQ8N594 471 aa5.14□□□□□ -1.59
LRFN5-204ENST00000554171 RAI14Q9P0K7 980 aa5.14□□□□□ -1.59
LRFN5-204ENST00000554171 PPP4CP60510 307 aa5.14□□□□□ -1.59
LRFN5-204ENST00000554171 SETDB1Q15047 1291 aa5.14□□□□□ -1.59
LRFN5-204ENST00000554171 MFAP1P55081 439 aaKnown RBP5.13□□□□□ -1.59
LRFN5-204ENST00000554171 RHBDL3P58872 404 aa5.13□□□□□ -1.59
LRFN5-204ENST00000554171 FAM50AQ14320 339 aaKnown RBP5.13□□□□□ -1.59
LRFN5-204ENST00000554171 FOXD4L6Q3SYB3 417 aaPredicted RBP5.13□□□□□ -1.59
LRFN5-204ENST00000554171 PPP4R3BQ5MIZ7 849 aa5.13□□□□□ -1.59
LRFN5-204ENST00000554171 FOXD4L3Q6VB84 417 aaPredicted RBP5.13□□□□□ -1.59
LRFN5-204ENST00000554171 RNF217Q8TC41 542 aa5.13□□□□□ -1.59
LRFN5-204ENST00000554171 RBM25P49756 843 aaKnown RBP5.13□□□□□ -1.59
LRFN5-204ENST00000554171 SPATA32Q96LK8 384 aa5.13□□□□□ -1.59
LRFN5-204ENST00000554171 PAK3O75914 559 aaPredicted RBP5.13□□□□□ -1.59
LRFN5-204ENST00000554171 DCAF11Q8TEB1 546 aa5.13□□□□□ -1.59
LRFN5-204ENST00000554171 TCERG1O14776 1098 aaKnown RBP5.12□□□□□ -1.59
LRFN5-204ENST00000554171 C11orf91Q3C1V1 193 aa5.12□□□□□ -1.59
LRFN5-204ENST00000554171 CCDC189A1A4V9 331 aa5.12□□□□□ -1.59
LRFN5-204ENST00000554171 DIEXFQ68CQ4 756 aaKnown RBP5.12□□□□□ -1.59
LRFN5-204ENST00000554171 ARIH1Q9Y4X5 557 aaPredicted RBP5.12□□□□□ -1.59
LRFN5-204ENST00000554171 NUB1Q9Y5A7 615 aa5.12□□□□□ -1.59
LRFN5-204ENST00000554171 RAD50Q92878 1312 aa5.12□□□□□ -1.59
LRFN5-204ENST00000554171 CAPN2P17655 700 aa5.12□□□□□ -1.59
LRFN5-204ENST00000554171 PPME1Q9Y570 386 aa5.12□□□□□ -1.59
LRFN5-204ENST00000554171 ZKSCAN8Q15776 578 aaPredicted RBP5.11□□□□□ -1.59
LRFN5-204ENST00000554171 ARID3CA6NKF2 412 aa5.11□□□□□ -1.59
LRFN5-204ENST00000554171 APLP1P51693 650 aa5.11□□□□□ -1.59
LRFN5-204ENST00000554171 HELBQ8NG08 1087 aaPredicted RBP5.11□□□□□ -1.59
LRFN5-204ENST00000554171 STK26Q9P289 416 aa5.11□□□□□ -1.59
LRFN5-204ENST00000554171 PATL2C9JE40 543 aaKnown RBP5.11□□□□□ -1.59
LRFN5-204ENST00000554171 TULP2O00295 520 aa5.11□□□□□ -1.59
LRFN5-204ENST00000554171 ZNF500O60304 480 aaPredicted RBP5.11□□□□□ -1.59
LRFN5-204ENST00000554171 IRF5Q13568 498 aa5.11□□□□□ -1.59
LRFN5-204ENST00000554171 TRIM44Q96DX7 344 aaPredicted RBP5.11□□□□□ -1.59
LRFN5-204ENST00000554171 ZNF526Q8TF50 670 aaPredicted RBP5.1□□□□□ -1.59
LRFN5-204ENST00000554171 RPGRIP1LQ68CZ1 1315 aa5.1□□□□□ -1.59
LRFN5-204ENST00000554171 PTMSP20962 102 aa5.1□□□□□ -1.59
LRFN5-204ENST00000554171 BARGINQ6ZT62 677 aa5.1□□□□□ -1.59
LRFN5-204ENST00000554171 EP400NLQ6ZTU2 488 aa5.1□□□□□ -1.59
LRFN5-204ENST00000554171 APBB1IPQ7Z5R6 666 aaPredicted RBP5.1□□□□□ -1.59
LRFN5-204ENST00000554171 PHF8Q9UPP1 1060 aa5.1□□□□□ -1.59
LRFN5-204ENST00000554171 PRDM2Q13029 1718 aa5.1□□□□□ -1.59
LRFN5-204ENST00000554171 CSPP1Q1MSJ5 1256 aa5.09□□□□□ -1.59
LRFN5-204ENST00000554171 ANKRD33BA6NCL7 494 aa5.09□□□□□ -1.59
LRFN5-204ENST00000554171 SNRNP27Q8WVK2 155 aaKnown RBP5.09□□□□□ -1.59
LRFN5-204ENST00000554171 DMRT2Q9Y5R5 561 aa5.09□□□□□ -1.59
LRFN5-204ENST00000554171 CD151P48509 253 aa5.09□□□□□ -1.59
LRFN5-204ENST00000554171 IRF2BPLQ9H1B7 796 aa5.09□□□□□ -1.59
LRFN5-204ENST00000554171 ERCC3P19447 782 aa5.09□□□□□ -1.6
LRFN5-204ENST00000554171 FOXD4Q12950 439 aaPredicted RBP5.09□□□□□ -1.6
LRFN5-204ENST00000554171 SPINK5Q9NQ38 1064 aaPredicted RBP5.09□□□□□ -1.6
LRFN5-204ENST00000554171 CT47A1Q5JQC4 288 aaPredicted RBP5.08□□□□□ -1.6
LRFN5-204ENST00000554171 FAM9BQ8IZU0 186 aa5.08□□□□□ -1.6
LRFN5-204ENST00000554171 ITFG2Q969R8 447 aa5.08□□□□□ -1.6
LRFN5-204ENST00000554171 QTRT2Q9H974 415 aaKnown RBP5.08□□□□□ -1.6
LRFN5-204ENST00000554171 ONECUT3O60422 494 aaPredicted RBP5.08□□□□□ -1.6
LRFN5-204ENST00000554171 IGHDP01880 384 aa5.08□□□□□ -1.6
LRFN5-204ENST00000554171 MAP2K1Q02750 393 aaPredicted RBP5.08□□□□□ -1.6
LRFN5-204ENST00000554171 RALBP1Q15311 655 aa5.08□□□□□ -1.6
LRFN5-204ENST00000554171 HSP90AB3PQ58FF7 597 aa5.08□□□□□ -1.6
LRFN5-204ENST00000554171 SLC39A13Q96H72 371 aa5.08□□□□□ -1.6
LRFN5-204ENST00000554171 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.08□□□□□ -1.6
LRFN5-204ENST00000554171 CEP126Q9P2H0 1117 aa5.08□□□□□ -1.6
LRFN5-204ENST00000554171 SYNRGQ9UMZ2 1314 aa5.07□□□□□ -1.6
LRFN5-204ENST00000554171 RIOK3O14730 519 aaKnown RBP5.07□□□□□ -1.6
LRFN5-204ENST00000554171 CADPS2Q86UW7 1296 aa5.07□□□□□ -1.6
LRFN5-204ENST00000554171 FEZ2Q9UHY8 353 aaPredicted RBP5.07□□□□□ -1.6
LRFN5-204ENST00000554171 LSM14AQ8ND56 463 aaKnown RBP5.07□□□□□ -1.6
LRFN5-204ENST00000554171 AMOTL2Q9Y2J4 779 aa5.07□□□□□ -1.6
LRFN5-204ENST00000554171 GOLGA6CA6NDK9 693 aa5.07□□□□□ -1.6
LRFN5-204ENST00000554171 GOLGA6BA6NDN3 693 aa5.07□□□□□ -1.6
LRFN5-204ENST00000554171 GOLGA6DP0CG33 693 aa5.07□□□□□ -1.6
LRFN5-204ENST00000554171 SKILP12757 684 aa5.07□□□□□ -1.6
LRFN5-204ENST00000554171 GOLGA6AQ9NYA3 693 aa5.07□□□□□ -1.6
LRFN5-204ENST00000554171 KRBA2Q6ZNG9 492 aa5.06□□□□□ -1.6
LRFN5-204ENST00000554171 MSL3Q8N5Y2 521 aaKnown RBP5.06□□□□□ -1.6
LRFN5-204ENST00000554171 CFAP69A5D8W1 941 aa5.06□□□□□ -1.6
LRFN5-204ENST00000554171 TPD52L2O43399 206 aaKnown RBP5.06□□□□□ -1.6
LRFN5-204ENST00000554171 TGFB3P10600 412 aa5.06□□□□□ -1.6
LRFN5-204ENST00000554171 IRX5P78411 483 aaPredicted RBP5.06□□□□□ -1.6
LRFN5-204ENST00000554171 CHMP4CQ96CF2 233 aa5.06□□□□□ -1.6
LRFN5-204ENST00000554171 USP35Q9P2H5 1018 aa5.06□□□□□ -1.6
LRFN5-204ENST00000554171 MARCH6O60337 910 aa5.06□□□□□ -1.6
LRFN5-204ENST00000554171 ARID4AP29374 1257 aaPredicted RBP5.06□□□□□ -1.6
LRFN5-204ENST00000554171 ATL2Q8NHH9 583 aa5.06□□□□□ -1.6
LRFN5-204ENST00000554171 NRBP1Q9UHY1 535 aa5.06□□□□□ -1.6
LRFN5-204ENST00000554171 KIF20AO95235 890 aa5.05□□□□□ -1.6
LRFN5-204ENST00000554171 TDO2P48775 406 aa5.05□□□□□ -1.6
LRFN5-204ENST00000554171 CLCN1P35523 988 aa5.05□□□□□ -1.6
LRFN5-204ENST00000554171 SATB1Q01826 763 aa5.05□□□□□ -1.6
LRFN5-204ENST00000554171 ARHGEF10LQ9HCE6 1279 aa5.05□□□□□ -1.6
LRFN5-204ENST00000554171 FAM200BP0CF97 657 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms