RNA–Protein interactions for RNA: ENST00000549194.1

GNPTAB-204, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 570 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-204ENST00000549194 NUDT7P0C024 238 aa12.61□□□□□ -0.39
GNPTAB-204ENST00000549194 LHX6Q9UPM6 363 aa12.6□□□□□ -0.39
GNPTAB-204ENST00000549194 IRX2Q9BZI1 471 aaPredicted RBP12.59□□□□□ -0.39
GNPTAB-204ENST00000549194 AQRO60306 1485 aaKnown RBP eCLIP12.58□□□□□ -0.4
GNPTAB-204ENST00000549194 PBRM1Q86U86 1689 aa12.57□□□□□ -0.4
GNPTAB-204ENST00000549194 ABCA10Q8WWZ4 1543 aa12.57□□□□□ -0.4
GNPTAB-204ENST00000549194 TDRD9Q8NDG6 1382 aaKnown RBP12.56□□□□□ -0.4
GNPTAB-204ENST00000549194 ARHGAP33O14559 1287 aa12.56□□□□□ -0.4
GNPTAB-204ENST00000549194 TK2O00142 265 aa12.55□□□□□ -0.4
GNPTAB-204ENST00000549194 PHF8Q9UPP1 1060 aa12.55□□□□□ -0.4
GNPTAB-204ENST00000549194 ABCA5Q8WWZ7 1642 aa12.55□□□□□ -0.4
GNPTAB-204ENST00000549194 EEA1Q15075 1411 aa12.54□□□□□ -0.4
GNPTAB-204ENST00000549194 NKX1-1Q15270 411 aaPredicted RBP12.54□□□□□ -0.4
GNPTAB-204ENST00000549194 HRO43593 1189 aa12.53□□□□□ -0.4
GNPTAB-204ENST00000549194 CHD1O14646 1710 aa12.52□□□□□ -0.41
GNPTAB-204ENST00000549194 RYDENQ9NUL5 291 aaKnown RBP12.52□□□□□ -0.41
GNPTAB-204ENST00000549194 GAPVD1Q14C86 1478 aa12.52□□□□□ -0.41
GNPTAB-204ENST00000549194 SPRYD3Q8NCJ5 442 aa12.51□□□□□ -0.41
GNPTAB-204ENST00000549194 PSDA5PKW4 1024 aaPredicted RBP12.5□□□□□ -0.41
GNPTAB-204ENST00000549194 SLC34A2O95436 690 aa12.5□□□□□ -0.41
GNPTAB-204ENST00000549194 PLCB2Q00722 1185 aa12.5□□□□□ -0.41
GNPTAB-204ENST00000549194 IFFO2Q5TF58 517 aa12.5□□□□□ -0.41
GNPTAB-204ENST00000549194 PAXIP1Q6ZW49 1069 aaPredicted RBP12.5□□□□□ -0.41
GNPTAB-204ENST00000549194 CCER1Q8TC90 406 aaPredicted RBP12.5□□□□□ -0.41
GNPTAB-204ENST00000549194 PCDHGA4Q9Y5G9 962 aa12.5□□□□□ -0.41
GNPTAB-204ENST00000549194 GRIN2BQ13224 1484 aa12.49□□□□□ -0.41
GNPTAB-204ENST00000549194 SNAPC4Q5SXM2 1469 aa12.49□□□□□ -0.41
GNPTAB-204ENST00000549194 TNIKQ9UKE5 1360 aa12.49□□□□□ -0.41
GNPTAB-204ENST00000549194 KIF3CO14782 793 aa12.49□□□□□ -0.41
GNPTAB-204ENST00000549194 KCTD12Q96CX2 325 aaKnown RBP12.48□□□□□ -0.41
GNPTAB-204ENST00000549194 CFAP44Q96MT7 982 aa12.47□□□□□ -0.41
GNPTAB-204ENST00000549194 NLRP6P59044 892 aa12.46□□□□□ -0.41
GNPTAB-204ENST00000549194 MAGI1Q96QZ7 1491 aaPredicted RBP12.46□□□□□ -0.42
GNPTAB-204ENST00000549194 CEP162Q5TB80 1403 aa12.45□□□□□ -0.42
GNPTAB-204ENST00000549194 GTPBP6O43824 516 aaPredicted RBP12.45□□□□□ -0.42
GNPTAB-204ENST00000549194 MFRPQ9BY79 579 aa12.45□□□□□ -0.42
GNPTAB-204ENST00000549194 ACIN1Q9UKV3 1341 aaKnown RBP12.43□□□□□ -0.42
GNPTAB-204ENST00000549194 C2orf72A6NCS6 295 aa12.43□□□□□ -0.42
GNPTAB-204ENST00000549194 ADAMTS12P58397 1594 aa12.43□□□□□ -0.42
GNPTAB-204ENST00000549194 ERICH3Q5RHP9 1530 aa12.42□□□□□ -0.42
GNPTAB-204ENST00000549194 CENPBP07199 599 aaPredicted RBP12.42□□□□□ -0.42
GNPTAB-204ENST00000549194 KIF27Q86VH2 1401 aa12.42□□□□□ -0.42
GNPTAB-204ENST00000549194 DMRTA1Q5VZB9 504 aa12.41□□□□□ -0.42
GNPTAB-204ENST00000549194 STAC3Q96MF2 364 aa12.41□□□□□ -0.42
GNPTAB-204ENST00000549194 SYNJ2O15056 1496 aa12.4□□□□□ -0.42
GNPTAB-204ENST00000549194 FBXO22Q8NEZ5 403 aa12.4□□□□□ -0.42
GNPTAB-204ENST00000549194 A0A0G2JS52 829 aa12.39□□□□□ -0.43
GNPTAB-204ENST00000549194 CHMP7Q8WUX9 453 aaPredicted RBP12.38□□□□□ -0.43
GNPTAB-204ENST00000549194 CUL7Q14999 1698 aa12.38□□□□□ -0.43
GNPTAB-204ENST00000549194 DIEXFQ68CQ4 756 aaKnown RBP12.37□□□□□ -0.43
GNPTAB-204ENST00000549194 GOLGA3Q08378 1498 aa12.37□□□□□ -0.43
GNPTAB-204ENST00000549194 FHAD1B1AJZ9 1412 aa12.37□□□□□ -0.43
GNPTAB-204ENST00000549194 PSEN2P49810 448 aa12.36□□□□□ -0.43
GNPTAB-204ENST00000549194 RUSC2Q8N2Y8 1516 aa12.35□□□□□ -0.43
GNPTAB-204ENST00000549194 GRIN2AQ12879 1464 aa12.34□□□□□ -0.43
GNPTAB-204ENST00000549194 PTPN5P54829 565 aa12.33□□□□□ -0.44
GNPTAB-204ENST00000549194 IGF1RP08069 1367 aa12.32□□□□□ -0.44
GNPTAB-204ENST00000549194 KDM4FA0A1W2PPD8 638 aa12.31□□□□□ -0.44
GNPTAB-204ENST00000549194 HAP1P54257 671 aaPredicted RBP12.31□□□□□ -0.44
GNPTAB-204ENST00000549194 CLASP1Q7Z460 1538 aa12.31□□□□□ -0.44
GNPTAB-204ENST00000549194 SLC24A1O60721 1099 aa12.3□□□□□ -0.44
GNPTAB-204ENST00000549194 NEUROD1Q13562 356 aa12.3□□□□□ -0.44
GNPTAB-204ENST00000549194 CEP170Q5SW79 1584 aa12.3□□□□□ -0.44
GNPTAB-204ENST00000549194 KIF21BO75037 1637 aa12.29□□□□□ -0.44
GNPTAB-204ENST00000549194 MYT1Q01538 1121 aa12.29□□□□□ -0.44
GNPTAB-204ENST00000549194 CARMIL1Q5VZK9 1371 aa12.28□□□□□ -0.44
GNPTAB-204ENST00000549194 PPP1R37O75864 691 aa12.27□□□□□ -0.45
GNPTAB-204ENST00000549194 UBTFP17480 764 aaKnown RBP12.27□□□□□ -0.45
GNPTAB-204ENST00000549194 PPP4R3BQ5MIZ7 849 aa12.27□□□□□ -0.45
GNPTAB-204ENST00000549194 RIMBP3CA6NJZ7 1639 aa12.26□□□□□ -0.45
GNPTAB-204ENST00000549194 RIMBP3BA6NNM3 1639 aa12.26□□□□□ -0.45
GNPTAB-204ENST00000549194 RIMBP3Q9UFD9 1639 aa12.26□□□□□ -0.45
GNPTAB-204ENST00000549194 TMC2Q8TDI7 906 aa12.26□□□□□ -0.45
GNPTAB-204ENST00000549194 NUP160Q12769 1436 aa12.26□□□□□ -0.45
GNPTAB-204ENST00000549194 Q6ZNB5 142 aa12.25□□□□□ -0.45
GNPTAB-204ENST00000549194 KCNH8Q96L42 1107 aa12.25□□□□□ -0.45
GNPTAB-204ENST00000549194 TSHZ2Q9NRE2 1034 aa12.25□□□□□ -0.45
GNPTAB-204ENST00000549194 ARHGEF11O15085 1522 aa12.22□□□□□ -0.45
GNPTAB-204ENST00000549194 RAPGEF2Q9Y4G8 1499 aa12.22□□□□□ -0.45
GNPTAB-204ENST00000549194 PTCD2Q8WV60 388 aaKnown RBP12.22□□□□□ -0.45
GNPTAB-204ENST00000549194 GTF3C3Q9Y5Q9 886 aa12.22□□□□□ -0.45
GNPTAB-204ENST00000549194 THSD4Q6ZMP0 1018 aa12.21□□□□□ -0.45
GNPTAB-204ENST00000549194 VPS9D1Q9Y2B5 631 aa12.21□□□□□ -0.45
GNPTAB-204ENST00000549194 CTTNBP2Q8WZ74 1663 aa12.21□□□□□ -0.45
GNPTAB-204ENST00000549194 SHROOM2Q13796 1616 aa12.21□□□□□ -0.46
GNPTAB-204ENST00000549194 CLIP1P30622 1438 aa12.2□□□□□ -0.46
GNPTAB-204ENST00000549194 VPS8Q8N3P4 1428 aa12.2□□□□□ -0.46
GNPTAB-204ENST00000549194 PRXQ9BXM0 1461 aa12.19□□□□□ -0.46
GNPTAB-204ENST00000549194 KCNK17Q96T54 332 aa12.18□□□□□ -0.46
GNPTAB-204ENST00000549194 KIAA0586Q9BVV6 1533 aa12.16□□□□□ -0.46
GNPTAB-204ENST00000549194 VSIG10Q8N0Z9 540 aa12.16□□□□□ -0.46
GNPTAB-204ENST00000549194 IQGAP2Q13576 1575 aa12.16□□□□□ -0.46
GNPTAB-204ENST00000549194 ERCC6L2Q5T890 1561 aa12.16□□□□□ -0.46
GNPTAB-204ENST00000549194 TTBK1Q5TCY1 1321 aaPredicted RBP12.15□□□□□ -0.46
GNPTAB-204ENST00000549194 SLC4A5Q9BY07 1137 aa12.15□□□□□ -0.46
GNPTAB-204ENST00000549194 CLSPNQ9HAW4 1339 aa12.13□□□□□ -0.47
GNPTAB-204ENST00000549194 ARAP1Q96P48 1450 aa12.13□□□□□ -0.47
GNPTAB-204ENST00000549194 JPH4Q96JJ6 628 aa12.12□□□□□ -0.47
GNPTAB-204ENST00000549194 PRG4Q92954 1404 aaPredicted RBP12.11□□□□□ -0.47
GNPTAB-204ENST00000549194 BHMG1C9JSJ3 638 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms