RNA–Protein interactions for RNA: ENST00000549194.1

GNPTAB-204, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 570 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-204ENST00000549194 AEBP2Q6ZN18 517 aaPredicted RBP30.79■■■□□ 2.52
GNPTAB-204ENST00000549194 CHIC1Q5VXU3 224 aa28.86■■■□□ 2.21
GNPTAB-204ENST00000549194 SENP3Q9H4L4 574 aaPredicted RBP26.49■■□□□ 1.83
GNPTAB-204ENST00000549194 PHF23Q9BUL5 403 aaPredicted RBP25.98■■□□□ 1.75
GNPTAB-204ENST00000549194 FOXD1Q16676 465 aa24.74■■□□□ 1.55
GNPTAB-204ENST00000549194 POTEDQ86YR6 584 aa24.41■■□□□ 1.5
GNPTAB-204ENST00000549194 MSH5O43196 834 aa23.57■■□□□ 1.36
GNPTAB-204ENST00000549194 PIAS4Q8N2W9 510 aaPredicted RBP22.92■■□□□ 1.26
GNPTAB-204ENST00000549194 PPP6R1Q9UPN7 881 aa22.42■■□□□ 1.18
GNPTAB-204ENST00000549194 PLPPR3Q6T4P5 718 aa22.37■■□□□ 1.17
GNPTAB-204ENST00000549194 ADRA2BP18089 450 aa22.3■■□□□ 1.16
GNPTAB-204ENST00000549194 DMRT2Q9Y5R5 561 aa20.85■□□□□ 0.93
GNPTAB-204ENST00000549194 MAPK8IP2Q13387 824 aaPredicted RBP20.73■□□□□ 0.91
GNPTAB-204ENST00000549194 CACNB1Q02641 598 aaPredicted RBP20.7■□□□□ 0.9
GNPTAB-204ENST00000549194 SCAF1Q9H7N4 1312 aaKnown RBP20.52■□□□□ 0.87
GNPTAB-204ENST00000549194 DCAF8L1A6NGE4 600 aa19.99■□□□□ 0.79
GNPTAB-204ENST00000549194 RNF39Q9H2S5 420 aa19.99■□□□□ 0.79
GNPTAB-204ENST00000549194 HOXD11P31277 338 aaPredicted RBP19.76■□□□□ 0.75
GNPTAB-204ENST00000549194 C1QBPQ07021 282 aaKnown RBP19.68■□□□□ 0.74
GNPTAB-204ENST00000549194 PPP4R3CPQ6ZMV5 832 aa19.46■□□□□ 0.71
GNPTAB-204ENST00000549194 RNF216Q9NWF9 866 aaPredicted RBP19.38■□□□□ 0.69
GNPTAB-204ENST00000549194 CNKSR2Q8WXI2 1034 aa19.33■□□□□ 0.68
GNPTAB-204ENST00000549194 DNAJC5BQ9UF47 199 aa19.33■□□□□ 0.68
GNPTAB-204ENST00000549194 POTEHQ6S545 545 aa18.97■□□□□ 0.63
GNPTAB-204ENST00000549194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.79■□□□□ 0.6
GNPTAB-204ENST00000549194 NCBP3Q53F19 620 aaKnown RBP18.5■□□□□ 0.55
GNPTAB-204ENST00000549194 DSG3P32926 999 aa18.41■□□□□ 0.54
GNPTAB-204ENST00000549194 CAPN15O75808 1086 aa18.3■□□□□ 0.52
GNPTAB-204ENST00000549194 U3KPZ7 1027 aaPredicted RBP18.3■□□□□ 0.52
GNPTAB-204ENST00000549194 SPINK5Q9NQ38 1064 aaPredicted RBP18.26■□□□□ 0.51
GNPTAB-204ENST00000549194 NPM3O75607 178 aaKnown RBP18.17■□□□□ 0.5
GNPTAB-204ENST00000549194 APLP2Q06481 763 aa17.79■□□□□ 0.44
GNPTAB-204ENST00000549194 ZNF219Q9P2Y4 722 aaPredicted RBP17.79■□□□□ 0.44
GNPTAB-204ENST00000549194 TRHP20396 242 aaPredicted RBP17.78■□□□□ 0.44
GNPTAB-204ENST00000549194 ABCB7O75027 752 aa17.76■□□□□ 0.43
GNPTAB-204ENST00000549194 RBM42Q9BTD8 480 aaKnown RBP17.66■□□□□ 0.42
GNPTAB-204ENST00000549194 NISCHQ9Y2I1 1504 aa17.63■□□□□ 0.41
GNPTAB-204ENST00000549194 SLC4A2P04920 1241 aa17.57■□□□□ 0.4
GNPTAB-204ENST00000549194 CHRDL2Q6WN34 429 aa17.56■□□□□ 0.4
GNPTAB-204ENST00000549194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
GNPTAB-204ENST00000549194 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
GNPTAB-204ENST00000549194 KCNA4P22459 653 aa17.54■□□□□ 0.4
GNPTAB-204ENST00000549194 SAMD1Q6SPF0 538 aaPredicted RBP17.39■□□□□ 0.37
GNPTAB-204ENST00000549194 SP7Q8TDD2 431 aaPredicted RBP17.38■□□□□ 0.37
GNPTAB-204ENST00000549194 POLA2Q14181 598 aa17.11■□□□□ 0.33
GNPTAB-204ENST00000549194 AKT1S1Q96B36 256 aa17.04■□□□□ 0.32
GNPTAB-204ENST00000549194 PIP4P2Q8N4L2 257 aa16.93■□□□□ 0.3
GNPTAB-204ENST00000549194 HAX1O00165 279 aa16.87■□□□□ 0.29
GNPTAB-204ENST00000549194 MYCNP04198 464 aaPredicted RBP16.87■□□□□ 0.29
GNPTAB-204ENST00000549194 REM2Q8IYK8 340 aaPredicted RBP16.84■□□□□ 0.29
GNPTAB-204ENST00000549194 ZBTB12Q9Y330 459 aaPredicted RBP16.78■□□□□ 0.28
GNPTAB-204ENST00000549194 SLC4A1APQ9BWU0 796 aaKnown RBP16.75■□□□□ 0.27
GNPTAB-204ENST00000549194 FXR2P51116 673 aaKnown RBP eCLIP16.72■□□□□ 0.27
GNPTAB-204ENST00000549194 PITPNM1O00562 1244 aa16.67■□□□□ 0.26
GNPTAB-204ENST00000549194 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
GNPTAB-204ENST00000549194 EVX2Q03828 476 aa16.54■□□□□ 0.24
GNPTAB-204ENST00000549194 ATF5Q9Y2D1 282 aaPredicted RBP16.46■□□□□ 0.23
GNPTAB-204ENST00000549194 EHMT2Q96KQ7 1210 aa16.34■□□□□ 0.21
GNPTAB-204ENST00000549194 LHX8Q68G74 356 aa16.29■□□□□ 0.2
GNPTAB-204ENST00000549194 PRKAR2AP13861 404 aaKnown RBP16.23■□□□□ 0.19
GNPTAB-204ENST00000549194 C19orf67A6NJJ6 358 aa16.22■□□□□ 0.19
GNPTAB-204ENST00000549194 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.19
GNPTAB-204ENST00000549194 SPDYE2BA6NHP3 402 aa16.17■□□□□ 0.18
GNPTAB-204ENST00000549194 GABBR2O75899 941 aa16.17■□□□□ 0.18
GNPTAB-204ENST00000549194 SPDYE6P0CI01 402 aa16.17■□□□□ 0.18
GNPTAB-204ENST00000549194 SPDYE2Q495Y8 402 aa16.17■□□□□ 0.18
GNPTAB-204ENST00000549194 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
GNPTAB-204ENST00000549194 ZBTB22O15209 634 aa16.11■□□□□ 0.17
GNPTAB-204ENST00000549194 SPDYE1Q8NFV5 336 aaPredicted RBP16.1■□□□□ 0.17
GNPTAB-204ENST00000549194 CLEC11AQ9Y240 323 aa16.06■□□□□ 0.16
GNPTAB-204ENST00000549194 FBLN2P98095 1184 aa15.97■□□□□ 0.15
GNPTAB-204ENST00000549194 PLSCR2Q9NRY7 297 aa15.93■□□□□ 0.14
GNPTAB-204ENST00000549194 ATXN8OSP0DMR3 200 aa15.84■□□□□ 0.13
GNPTAB-204ENST00000549194 SSUH2Q9Y2M2 353 aa15.84■□□□□ 0.13
GNPTAB-204ENST00000549194 CHADLQ6NUI6 762 aa15.82■□□□□ 0.12
GNPTAB-204ENST00000549194 POTEIP0CG38 1075 aa15.8■□□□□ 0.12
GNPTAB-204ENST00000549194 ZNF692Q9BU19 519 aaPredicted RBP15.79■□□□□ 0.12
GNPTAB-204ENST00000549194 CLCN6P51797 869 aa15.74■□□□□ 0.11
GNPTAB-204ENST00000549194 PRR29P0C7W0 189 aa15.7■□□□□ 0.1
GNPTAB-204ENST00000549194 CCDC180Q9P1Z9 1646 aa15.69■□□□□ 0.1
GNPTAB-204ENST00000549194 MKRN4PQ13434 485 aaPredicted RBP15.68■□□□□ 0.1
GNPTAB-204ENST00000549194 CD44P16070 742 aaKnown RBP15.67■□□□□ 0.1
GNPTAB-204ENST00000549194 DCBLD2Q96PD2 775 aa15.58■□□□□ 0.08
GNPTAB-204ENST00000549194 FARP1Q9Y4F1 1045 aaPredicted RBP15.55■□□□□ 0.08
GNPTAB-204ENST00000549194 PABPN1Q86U42 306 aaKnown RBP eCLIP15.52■□□□□ 0.08
GNPTAB-204ENST00000549194 ZNF579Q8NAF0 562 aaKnown RBP15.42■□□□□ 0.06
GNPTAB-204ENST00000549194 OTUD5Q96G74 571 aa15.4■□□□□ 0.06
GNPTAB-204ENST00000549194 POTEMA6NI47 508 aa15.37■□□□□ 0.05
GNPTAB-204ENST00000549194 ZRANB1Q9UGI0 708 aa15.3■□□□□ 0.04
GNPTAB-204ENST00000549194 POTEGQ6S5H5 508 aa15.29■□□□□ 0.04
GNPTAB-204ENST00000549194 POTEB2H3BUK9 544 aa15.25■□□□□ 0.03
GNPTAB-204ENST00000549194 PCDH10Q9P2E7 1040 aa15.25■□□□□ 0.03
GNPTAB-204ENST00000549194 GALR2O43603 387 aaPredicted RBP15.24■□□□□ 0.03
GNPTAB-204ENST00000549194 ABCC9O60706 1549 aa15.23■□□□□ 0.03
GNPTAB-204ENST00000549194 CREBZFQ9NS37 354 aa15.08■□□□□ 0
GNPTAB-204ENST00000549194 PAK3O75914 559 aaPredicted RBP15.04■□□□□ -0
GNPTAB-204ENST00000549194 PELP1Q8IZL8 1130 aaKnown RBP15□□□□□ -0.01
GNPTAB-204ENST00000549194 PHF12Q96QT6 1004 aa14.99□□□□□ -0.01
GNPTAB-204ENST00000549194 STAG3Q9UJ98 1225 aa14.99□□□□□ -0.01
GNPTAB-204ENST00000549194 MAMSTRQ6ZN01 415 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms