RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 THOC2Q8NI27 1593 aaKnown RBP9.16□□□□□ -0.94
SNHG1-225ENST00000545920 MKRN3Q13064 507 aaKnown RBP9.15□□□□□ -0.94
SNHG1-225ENST00000545920 C3orf67Q6ZVT6 689 aa9.15□□□□□ -0.94
SNHG1-225ENST00000545920 SUPT16HQ9Y5B9 1047 aaKnown RBP9.15□□□□□ -0.94
SNHG1-225ENST00000545920 PHLDB1Q86UU1 1377 aa9.14□□□□□ -0.95
SNHG1-225ENST00000545920 GOLGA2Q08379 1002 aa9.14□□□□□ -0.95
SNHG1-225ENST00000545920 RANGAP1P46060 587 aaPredicted RBP9.13□□□□□ -0.95
SNHG1-225ENST00000545920 FANCD2Q9BXW9 1451 aa9.13□□□□□ -0.95
SNHG1-225ENST00000545920 HFM1A2PYH4 1435 aa9.12□□□□□ -0.95
SNHG1-225ENST00000545920 P3H3Q8IVL6 736 aa9.11□□□□□ -0.95
SNHG1-225ENST00000545920 AKNAQ7Z591 1439 aa9.11□□□□□ -0.95
SNHG1-225ENST00000545920 PCF11O94913 1555 aaKnown RBP9.11□□□□□ -0.95
SNHG1-225ENST00000545920 PPP1R15AO75807 674 aaPredicted RBP9.1□□□□□ -0.95
SNHG1-225ENST00000545920 EMP3P54852 163 aa9.1□□□□□ -0.95
SNHG1-225ENST00000545920 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.1□□□□□ -0.95
SNHG1-225ENST00000545920 FGD6Q6ZV73 1430 aa9.1□□□□□ -0.95
SNHG1-225ENST00000545920 UACAQ9BZF9 1416 aa9.1□□□□□ -0.95
SNHG1-225ENST00000545920 PSEN1P49768 467 aa9.09□□□□□ -0.95
SNHG1-225ENST00000545920 ILDR1Q86SU0 546 aaPredicted RBP9.08□□□□□ -0.96
SNHG1-225ENST00000545920 TOPBP1Q92547 1522 aa9.08□□□□□ -0.96
SNHG1-225ENST00000545920 POLA1P09884 1462 aaPredicted RBP9.08□□□□□ -0.96
SNHG1-225ENST00000545920 KIF21AQ7Z4S6 1674 aa9.07□□□□□ -0.96
SNHG1-225ENST00000545920 NEFLP07196 543 aa9.07□□□□□ -0.96
SNHG1-225ENST00000545920 ERICH6BQ5W0A0 696 aa9.07□□□□□ -0.96
SNHG1-225ENST00000545920 CCDC18Q5T9S5 1454 aa9.07□□□□□ -0.96
SNHG1-225ENST00000545920 EHBP1L1Q8N3D4 1523 aa9.06□□□□□ -0.96
SNHG1-225ENST00000545920 ANP32CO43423 234 aa9.06□□□□□ -0.96
SNHG1-225ENST00000545920 FAM50AQ14320 339 aaKnown RBP9.06□□□□□ -0.96
SNHG1-225ENST00000545920 SNAPC4Q5SXM2 1469 aa9.06□□□□□ -0.96
SNHG1-225ENST00000545920 SAMD9Q5K651 1589 aa9.06□□□□□ -0.96
SNHG1-225ENST00000545920 LAMC3Q9Y6N6 1575 aa9.06□□□□□ -0.96
SNHG1-225ENST00000545920 CTTNBP2Q8WZ74 1663 aa9.06□□□□□ -0.96
SNHG1-225ENST00000545920 MYOM3Q5VTT5 1437 aa9.05□□□□□ -0.96
SNHG1-225ENST00000545920 WDR97A6NE52 1622 aa9.05□□□□□ -0.96
SNHG1-225ENST00000545920 MTUS2Q5JR59 1369 aa9.05□□□□□ -0.96
SNHG1-225ENST00000545920 TONSLQ96HA7 1378 aa9.05□□□□□ -0.96
SNHG1-225ENST00000545920 PDAP1Q13442 181 aaKnown RBP9.05□□□□□ -0.96
SNHG1-225ENST00000545920 CADPS2Q86UW7 1296 aa9.05□□□□□ -0.96
SNHG1-225ENST00000545920 HS3ST6Q96QI5 342 aa9.05□□□□□ -0.96
SNHG1-225ENST00000545920 POTEB3A0JP26 581 aa9.04□□□□□ -0.96
SNHG1-225ENST00000545920 POTEBQ6S5H4 581 aa9.04□□□□□ -0.96
SNHG1-225ENST00000545920 KRTAP3-3Q9BYR6 98 aa9.04□□□□□ -0.96
SNHG1-225ENST00000545920 KRTAP3-2Q9BYR7 98 aa9.04□□□□□ -0.96
SNHG1-225ENST00000545920 FHOD3Q2V2M9 1422 aa9.04□□□□□ -0.96
SNHG1-225ENST00000545920 GRIN2BQ13224 1484 aa9.03□□□□□ -0.96
SNHG1-225ENST00000545920 TCOF1Q13428 1488 aaKnown RBP9.03□□□□□ -0.96
SNHG1-225ENST00000545920 ITGAEP38570 1179 aa9.03□□□□□ -0.96
SNHG1-225ENST00000545920 ARHGEF11O15085 1522 aa9.03□□□□□ -0.96
SNHG1-225ENST00000545920 FAM205CA6NFA0 338 aa9.02□□□□□ -0.97
SNHG1-225ENST00000545920 KCNV2Q8TDN2 545 aa9.02□□□□□ -0.97
SNHG1-225ENST00000545920 MIA2Q96PC5 1412 aa9.02□□□□□ -0.97
SNHG1-225ENST00000545920 PTPN23Q9H3S7 1636 aa9.02□□□□□ -0.97
SNHG1-225ENST00000545920 NAIPQ13075 1403 aa9.01□□□□□ -0.97
SNHG1-225ENST00000545920 ABCA5Q8WWZ7 1642 aa9.01□□□□□ -0.97
SNHG1-225ENST00000545920 SUPT6HQ7KZ85 1726 aaKnown RBP9□□□□□ -0.97
SNHG1-225ENST00000545920 PDS5BQ9NTI5 1447 aa9□□□□□ -0.97
SNHG1-225ENST00000545920 TMEM132AQ24JP5 1023 aa9□□□□□ -0.97
SNHG1-225ENST00000545920 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9□□□□□ -0.97
SNHG1-225ENST00000545920 NCOA2Q15596 1464 aa9□□□□□ -0.97
SNHG1-225ENST00000545920 UGGT2Q9NYU1 1516 aa9□□□□□ -0.97
SNHG1-225ENST00000545920 DDX10Q13206 875 aaKnown RBP8.99□□□□□ -0.97
SNHG1-225ENST00000545920 DPY19L2Q6NUT2 758 aa8.99□□□□□ -0.97
SNHG1-225ENST00000545920 MFRPQ9BY79 579 aa8.99□□□□□ -0.97
SNHG1-225ENST00000545920 WDR70Q9NW82 654 aa8.99□□□□□ -0.97
SNHG1-225ENST00000545920 BOLA1Q9Y3E2 137 aa8.99□□□□□ -0.97
SNHG1-225ENST00000545920 GAPVD1Q14C86 1478 aa8.98□□□□□ -0.97
SNHG1-225ENST00000545920 RAD54L2Q9Y4B4 1467 aa8.98□□□□□ -0.97
SNHG1-225ENST00000545920 ANP32EQ9BTT0 268 aa8.98□□□□□ -0.97
SNHG1-225ENST00000545920 ROCK1Q13464 1354 aa8.98□□□□□ -0.97
SNHG1-225ENST00000545920 G3V3G9 751 aa8.97□□□□□ -0.97
SNHG1-225ENST00000545920 HOXB3P14651 431 aaPredicted RBP8.97□□□□□ -0.97
SNHG1-225ENST00000545920 SIN3AQ96ST3 1273 aa8.97□□□□□ -0.97
SNHG1-225ENST00000545920 HECW1Q76N89 1606 aa8.97□□□□□ -0.97
SNHG1-225ENST00000545920 LMOD2Q6P5Q4 547 aa8.96□□□□□ -0.98
SNHG1-225ENST00000545920 ERICH6Q7L0X2 663 aa8.96□□□□□ -0.98
SNHG1-225ENST00000545920 CABP2Q9NPB3 220 aa8.96□□□□□ -0.98
SNHG1-225ENST00000545920 GCC2Q8IWJ2 1684 aa8.95□□□□□ -0.98
SNHG1-225ENST00000545920 TULP1O00294 542 aaPredicted RBP8.95□□□□□ -0.98
SNHG1-225ENST00000545920 URB2Q14146 1524 aaKnown RBP8.95□□□□□ -0.98
SNHG1-225ENST00000545920 HOXB1P14653 301 aaPredicted RBP8.94□□□□□ -0.98
SNHG1-225ENST00000545920 ARHGEF1Q92888 912 aaKnown RBP8.94□□□□□ -0.98
SNHG1-225ENST00000545920 PTPRKQ15262 1439 aa8.93□□□□□ -0.98
SNHG1-225ENST00000545920 KDM5BQ9UGL1 1544 aa8.93□□□□□ -0.98
SNHG1-225ENST00000545920 EIF4G2P78344 907 aaKnown RBP eCLIP8.92□□□□□ -0.98
SNHG1-225ENST00000545920 FBXO22Q8NEZ5 403 aa8.92□□□□□ -0.98
SNHG1-225ENST00000545920 MYT1LQ9UL68 1186 aa8.92□□□□□ -0.98
SNHG1-225ENST00000545920 ATP1B4Q9UN42 357 aaPredicted RBP8.92□□□□□ -0.98
SNHG1-225ENST00000545920 DOK7Q18PE1 504 aa8.91□□□□□ -0.98
SNHG1-225ENST00000545920 ZNF710Q8N1W2 664 aa8.91□□□□□ -0.98
SNHG1-225ENST00000545920 CNTLNQ9NXG0 1405 aa8.9□□□□□ -0.98
SNHG1-225ENST00000545920 ARID4BQ4LE39 1312 aaPredicted RBP8.9□□□□□ -0.98
SNHG1-225ENST00000545920 SOX12O15370 315 aa8.9□□□□□ -0.98
SNHG1-225ENST00000545920 EPRSP07814 1512 aaKnown RBP8.9□□□□□ -0.99
SNHG1-225ENST00000545920 FANCIQ9NVI1 1328 aa8.89□□□□□ -0.99
SNHG1-225ENST00000545920 PPP1R37O75864 691 aa8.89□□□□□ -0.99
SNHG1-225ENST00000545920 IQGAP2Q13576 1575 aa8.89□□□□□ -0.99
SNHG1-225ENST00000545920 NCOA1Q15788 1441 aa8.88□□□□□ -0.99
SNHG1-225ENST00000545920 NLRP6P59044 892 aa8.88□□□□□ -0.99
SNHG1-225ENST00000545920 KCNH8Q96L42 1107 aa8.88□□□□□ -0.99
SNHG1-225ENST00000545920 CDK11AQ9UQ88 783 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms