RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 PPP4R2Q9NY27 417 aa21.19■□□□□ 0.98
SCAP-215ENST00000545718 ARID4BQ4LE39 1312 aaPredicted RBP21.18■□□□□ 0.98
SCAP-215ENST00000545718 SALL2Q9Y467 1007 aaPredicted RBP21.18■□□□□ 0.98
SCAP-215ENST00000545718 TTC37Q6PGP7 1564 aa21.17■□□□□ 0.98
SCAP-215ENST00000545718 PREX2Q70Z35 1606 aa21.17■□□□□ 0.98
SCAP-215ENST00000545718 ARHGEF12Q9NZN5 1544 aa21.16■□□□□ 0.98
SCAP-215ENST00000545718 PLEKHH2Q8IVE3 1493 aa21.16■□□□□ 0.98
SCAP-215ENST00000545718 KDM5DQ9BY66 1539 aa21.15■□□□□ 0.98
SCAP-215ENST00000545718 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.15■□□□□ 0.983e-6■■■□□ 15.3
SCAP-215ENST00000545718 MYT1LQ9UL68 1186 aa21.15■□□□□ 0.98
SCAP-215ENST00000545718 PNISRQ8TF01 805 aaKnown RBP21.13■□□□□ 0.97
SCAP-215ENST00000545718 EFCAB2Q5VUJ9 269 aa21.12■□□□□ 0.97
SCAP-215ENST00000545718 NUDCQ9Y266 331 aa21.09■□□□□ 0.97
SCAP-215ENST00000545718 ERICH6BQ5W0A0 696 aa21.09■□□□□ 0.97
SCAP-215ENST00000545718 ANP32EQ9BTT0 268 aa21.09■□□□□ 0.97
SCAP-215ENST00000545718 ABCC2Q92887 1545 aa21.08■□□□□ 0.97
SCAP-215ENST00000545718 PRAG1Q86YV5 1406 aa21.08■□□□□ 0.97
SCAP-215ENST00000545718 CC2D1BQ5T0F9 858 aaKnown RBP21.08■□□□□ 0.97
SCAP-215ENST00000545718 MYBBP1AQ9BQG0 1328 aaKnown RBP21.07■□□□□ 0.96
SCAP-215ENST00000545718 AFAP1Q8N556 730 aa21.07■□□□□ 0.96
SCAP-215ENST00000545718 PLA2R1Q13018 1463 aa21.07■□□□□ 0.96
SCAP-215ENST00000545718 RALBP1Q15311 655 aa21.06■□□□□ 0.96
SCAP-215ENST00000545718 A2MP01023 1474 aa21.03■□□□□ 0.96
SCAP-215ENST00000545718 SPAG9O60271 1321 aaKnown RBP21.03■□□□□ 0.96
SCAP-215ENST00000545718 SMG6Q86US8 1419 aaKnown RBP21.03■□□□□ 0.96
SCAP-215ENST00000545718 MYO5CQ9NQX4 1742 aa21.02■□□□□ 0.96
SCAP-215ENST00000545718 KTN1Q86UP2 1357 aaKnown RBP21.01■□□□□ 0.95
SCAP-215ENST00000545718 TRAPPC8Q9Y2L5 1435 aa21.01■□□□□ 0.95
SCAP-215ENST00000545718 PLCH2O75038 1416 aa21.01■□□□□ 0.95
SCAP-215ENST00000545718 SHROOM2Q13796 1616 aa21■□□□□ 0.95
SCAP-215ENST00000545718 PANK3Q9H999 370 aa21■□□□□ 0.95
SCAP-215ENST00000545718 NLRP13Q86W25 1043 aa20.99■□□□□ 0.95
SCAP-215ENST00000545718 BRD4O60885 1362 aaPredicted RBP20.99■□□□□ 0.95
SCAP-215ENST00000545718 CCDC136Q96JN2 1154 aa20.99■□□□□ 0.95
SCAP-215ENST00000545718 DISP3Q9P2K9 1392 aa20.99■□□□□ 0.95
SCAP-215ENST00000545718 DUOX2Q9NRD8 1548 aa20.98■□□□□ 0.95
SCAP-215ENST00000545718 TMF1P82094 1093 aa20.97■□□□□ 0.95
SCAP-215ENST00000545718 TESK2Q96S53 571 aa20.97■□□□□ 0.95
SCAP-215ENST00000545718 UNC13BO14795 1591 aa20.96■□□□□ 0.95
SCAP-215ENST00000545718 MAST1Q9Y2H9 1570 aa20.96■□□□□ 0.95
SCAP-215ENST00000545718 TRPM1Q7Z4N2 1603 aa20.95■□□□□ 0.94
SCAP-215ENST00000545718 ZCCHC11Q5TAX3 1644 aaKnown RBP20.94■□□□□ 0.94
SCAP-215ENST00000545718 PER1O15534 1290 aaPredicted RBP20.94■□□□□ 0.94
SCAP-215ENST00000545718 ERBINQ96RT1 1412 aa20.93■□□□□ 0.94
SCAP-215ENST00000545718 MSH5O43196 834 aa20.93■□□□□ 0.94
SCAP-215ENST00000545718 PLXNC1O60486 1568 aa20.92■□□□□ 0.94
SCAP-215ENST00000545718 KIF3BO15066 747 aa20.92■□□□□ 0.94
SCAP-215ENST00000545718 ERICH6Q7L0X2 663 aa20.92■□□□□ 0.94
SCAP-215ENST00000545718 IQGAP3Q86VI3 1631 aa20.91■□□□□ 0.94
SCAP-215ENST00000545718 LRPPRCP42704 1394 aaKnown RBP20.91■□□□□ 0.94
SCAP-215ENST00000545718 GPRASP1Q5JY77 1395 aa20.91■□□□□ 0.94
SCAP-215ENST00000545718 PARD3Q8TEW0 1356 aa20.89■□□□□ 0.93
SCAP-215ENST00000545718 COL17A1Q9UMD9 1497 aaPredicted RBP20.88■□□□□ 0.93
SCAP-215ENST00000545718 ABCC1P33527 1531 aa20.87■□□□□ 0.93
SCAP-215ENST00000545718 CDCA7LQ96GN5 454 aa20.87■□□□□ 0.93
SCAP-215ENST00000545718 RCAN3Q9UKA8 241 aa20.85■□□□□ 0.93
SCAP-215ENST00000545718 KNSTRNQ9Y448 316 aa20.85■□□□□ 0.93
SCAP-215ENST00000545718 SCAPERQ9BY12 1400 aa20.84■□□□□ 0.93
SCAP-215ENST00000545718 RNF123Q5XPI4 1314 aa20.83■□□□□ 0.93
SCAP-215ENST00000545718 FANCIQ9NVI1 1328 aa20.83■□□□□ 0.93
SCAP-215ENST00000545718 E9PCH4 1651 aa20.83■□□□□ 0.93
SCAP-215ENST00000545718 PRDM15P57071 1507 aaPredicted RBP20.83■□□□□ 0.93
SCAP-215ENST00000545718 KANK1Q14678 1352 aa20.82■□□□□ 0.92
SCAP-215ENST00000545718 CHGAP10645 457 aaKnown RBP20.82■□□□□ 0.92
SCAP-215ENST00000545718 RRP1P56182 461 aaKnown RBP20.82■□□□□ 0.92
SCAP-215ENST00000545718 CLASP1Q7Z460 1538 aa20.81■□□□□ 0.92
SCAP-215ENST00000545718 UHRF1BP1LA0JNW5 1464 aa20.81■□□□□ 0.92
SCAP-215ENST00000545718 MAGI2Q86UL8 1455 aa20.81■□□□□ 0.92
SCAP-215ENST00000545718 EXOC6Q8TAG9 804 aa20.81■□□□□ 0.92
SCAP-215ENST00000545718 ATP10AO60312 1499 aa20.81■□□□□ 0.92
SCAP-215ENST00000545718 EIF2AK4Q9P2K8 1649 aaKnown RBP20.8■□□□□ 0.92
SCAP-215ENST00000545718 FANCAO15360 1455 aa20.8■□□□□ 0.92
SCAP-215ENST00000545718 WASHC2CQ9Y4E1 1318 aa20.78■□□□□ 0.92
SCAP-215ENST00000545718 PLIN1O60240 522 aa20.77■□□□□ 0.92
SCAP-215ENST00000545718 CFAP70Q5T0N1 1121 aa20.76■□□□□ 0.91
SCAP-215ENST00000545718 ADAMTS8Q9UP79 889 aa20.76■□□□□ 0.91
SCAP-215ENST00000545718 WDR7Q9Y4E6 1490 aa20.76■□□□□ 0.91
SCAP-215ENST00000545718 WDR43Q15061 677 aaKnown RBP eCLIP20.76■□□□□ 0.91
SCAP-215ENST00000545718 ZFYVE16Q7Z3T8 1539 aa20.76■□□□□ 0.91
SCAP-215ENST00000545718 RTEL1-TNFRSF6BF6WH68 1400 aa20.75■□□□□ 0.91
SCAP-215ENST00000545718 PDE3BQ13370 1112 aa20.74■□□□□ 0.91
SCAP-215ENST00000545718 ADGRL1O94910 1474 aa20.74■□□□□ 0.91
SCAP-215ENST00000545718 CDCA8Q53HL2 280 aa20.74■□□□□ 0.91
SCAP-215ENST00000545718 OSCARQ8IYS5 282 aa20.73■□□□□ 0.91
SCAP-215ENST00000545718 NPM1P06748 294 aaKnown RBP eCLIP20.72■□□□□ 0.91
SCAP-215ENST00000545718 PPP2R1AP30153 589 aa20.72■□□□□ 0.91
SCAP-215ENST00000545718 ATP7AQ04656 1500 aa20.71■□□□□ 0.91
SCAP-215ENST00000545718 LAMC1P11047 1609 aa20.71■□□□□ 0.91
SCAP-215ENST00000545718 GGT6Q6P531 493 aa20.7■□□□□ 0.9
SCAP-215ENST00000545718 ADGRF5Q8IZF2 1346 aa20.7■□□□□ 0.9
SCAP-215ENST00000545718 SCAF11Q99590 1463 aaKnown RBP20.69■□□□□ 0.9
SCAP-215ENST00000545718 TRPM2O94759 1503 aa20.69■□□□□ 0.9
SCAP-215ENST00000545718 CLTCL1P53675 1640 aa20.69■□□□□ 0.9
SCAP-215ENST00000545718 UGGT1Q9NYU2 1555 aa20.68■□□□□ 0.9
SCAP-215ENST00000545718 AMER1Q5JTC6 1135 aaPredicted RBP20.68■□□□□ 0.9
SCAP-215ENST00000545718 MADDQ8WXG6 1647 aa20.68■□□□□ 0.9
SCAP-215ENST00000545718 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
SCAP-215ENST00000545718 ASXL2Q76L83 1435 aa20.68■□□□□ 0.9
SCAP-215ENST00000545718 PTPRTO14522 1441 aa20.67■□□□□ 0.9
SCAP-215ENST00000545718 CCDC146Q8IYE0 955 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms