RNA–Protein interactions for RNA: ENST00000542200.2

AP3B2-209, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2 BASIC

Gene AP3B2, Length 3,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-209ENST00000542200 TTC37Q6PGP7 1564 aa13.36□□□□□ -0.27
AP3B2-209ENST00000542200 PLEKHH2Q8IVE3 1493 aa13.36□□□□□ -0.27
AP3B2-209ENST00000542200 PREX2Q70Z35 1606 aa13.36□□□□□ -0.27
AP3B2-209ENST00000542200 RBM19Q9Y4C8 960 aaKnown RBP13.35□□□□□ -0.27
AP3B2-209ENST00000542200 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.35□□□□□ -0.27
AP3B2-209ENST00000542200 KDM5CP41229 1560 aa13.35□□□□□ -0.27
AP3B2-209ENST00000542200 KDM5DQ9BY66 1539 aa13.34□□□□□ -0.27
AP3B2-209ENST00000542200 ARHGEF12Q9NZN5 1544 aa13.34□□□□□ -0.27
AP3B2-209ENST00000542200 SALL2Q9Y467 1007 aaPredicted RBP13.33□□□□□ -0.27
AP3B2-209ENST00000542200 ABCC2Q92887 1545 aa13.33□□□□□ -0.28
AP3B2-209ENST00000542200 B4GALNT3Q6L9W6 998 aa13.33□□□□□ -0.28
AP3B2-209ENST00000542200 AFAP1Q8N556 730 aa13.33□□□□□ -0.28
AP3B2-209ENST00000542200 PPP4R2Q9NY27 417 aa13.32□□□□□ -0.28
AP3B2-209ENST00000542200 POLR1AO95602 1720 aaPredicted RBP13.3□□□□□ -0.28
AP3B2-209ENST00000542200 SPAG9O60271 1321 aaKnown RBP13.3□□□□□ -0.28
AP3B2-209ENST00000542200 PNISRQ8TF01 805 aaKnown RBP13.3□□□□□ -0.28
AP3B2-209ENST00000542200 MYT1Q01538 1121 aa13.3□□□□□ -0.28
AP3B2-209ENST00000542200 CC2D1BQ5T0F9 858 aaKnown RBP13.29□□□□□ -0.28
AP3B2-209ENST00000542200 PRAG1Q86YV5 1406 aa13.29□□□□□ -0.28
AP3B2-209ENST00000542200 PLCH2O75038 1416 aa13.28□□□□□ -0.28
AP3B2-209ENST00000542200 PLA2R1Q13018 1463 aa13.28□□□□□ -0.28
AP3B2-209ENST00000542200 MYBBP1AQ9BQG0 1328 aaKnown RBP13.28□□□□□ -0.28
AP3B2-209ENST00000542200 RALBP1Q15311 655 aa13.28□□□□□ -0.28
AP3B2-209ENST00000542200 TRAPPC8Q9Y2L5 1435 aa13.27□□□□□ -0.28
AP3B2-209ENST00000542200 NUDCQ9Y266 331 aa13.27□□□□□ -0.28
AP3B2-209ENST00000542200 SHROOM2Q13796 1616 aa13.27□□□□□ -0.28
AP3B2-209ENST00000542200 ERICH6BQ5W0A0 696 aa13.27□□□□□ -0.29
AP3B2-209ENST00000542200 MYO5CQ9NQX4 1742 aa13.27□□□□□ -0.29
AP3B2-209ENST00000542200 A2MP01023 1474 aa13.26□□□□□ -0.29
AP3B2-209ENST00000542200 KTN1Q86UP2 1357 aaKnown RBP13.25□□□□□ -0.29
AP3B2-209ENST00000542200 DUOX2Q9NRD8 1548 aa13.25□□□□□ -0.29
AP3B2-209ENST00000542200 TMF1P82094 1093 aa13.24□□□□□ -0.29
AP3B2-209ENST00000542200 PANK3Q9H999 370 aa13.24□□□□□ -0.29
AP3B2-209ENST00000542200 KIF3BO15066 747 aa13.23□□□□□ -0.29
AP3B2-209ENST00000542200 NLRP13Q86W25 1043 aa13.23□□□□□ -0.29
AP3B2-209ENST00000542200 BRD4O60885 1362 aaPredicted RBP13.22□□□□□ -0.29
AP3B2-209ENST00000542200 DISP3Q9P2K9 1392 aa13.22□□□□□ -0.29
AP3B2-209ENST00000542200 ZCCHC11Q5TAX3 1644 aaKnown RBP13.22□□□□□ -0.29
AP3B2-209ENST00000542200 MAST1Q9Y2H9 1570 aa13.22□□□□□ -0.29
AP3B2-209ENST00000542200 SMG6Q86US8 1419 aaKnown RBP13.22□□□□□ -0.29
AP3B2-209ENST00000542200 ERBINQ96RT1 1412 aa13.22□□□□□ -0.29
AP3B2-209ENST00000542200 TESK2Q96S53 571 aa13.22□□□□□ -0.29
AP3B2-209ENST00000542200 UNC13BO14795 1591 aa13.21□□□□□ -0.29
AP3B2-209ENST00000542200 CCDC136Q96JN2 1154 aa13.2□□□□□ -0.3
AP3B2-209ENST00000542200 ANP32EQ9BTT0 268 aa13.2□□□□□ -0.3
AP3B2-209ENST00000542200 PLXNC1O60486 1568 aa13.2□□□□□ -0.3
AP3B2-209ENST00000542200 PER1O15534 1290 aaPredicted RBP13.19□□□□□ -0.3
AP3B2-209ENST00000542200 TRPM1Q7Z4N2 1603 aa13.19□□□□□ -0.3
AP3B2-209ENST00000542200 GPRASP1Q5JY77 1395 aa13.18□□□□□ -0.3
AP3B2-209ENST00000542200 IQGAP3Q86VI3 1631 aa13.18□□□□□ -0.3
AP3B2-209ENST00000542200 SCAPERQ9BY12 1400 aa13.18□□□□□ -0.3
AP3B2-209ENST00000542200 ABCC1P33527 1531 aa13.18□□□□□ -0.3
AP3B2-209ENST00000542200 UHRF1BP1LA0JNW5 1464 aa13.17□□□□□ -0.3
AP3B2-209ENST00000542200 KANK1Q14678 1352 aa13.17□□□□□ -0.3
AP3B2-209ENST00000542200 CHGAP10645 457 aaKnown RBP13.17□□□□□ -0.3
AP3B2-209ENST00000542200 CLASP1Q7Z460 1538 aa13.16□□□□□ -0.3
AP3B2-209ENST00000542200 KNSTRNQ9Y448 316 aa13.16□□□□□ -0.3
AP3B2-209ENST00000542200 LRPPRCP42704 1394 aaKnown RBP13.15□□□□□ -0.3
AP3B2-209ENST00000542200 PARD3Q8TEW0 1356 aa13.15□□□□□ -0.3
AP3B2-209ENST00000542200 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.3
AP3B2-209ENST00000542200 FANCAO15360 1455 aa13.15□□□□□ -0.3
AP3B2-209ENST00000542200 COL17A1Q9UMD9 1497 aaPredicted RBP13.15□□□□□ -0.3
AP3B2-209ENST00000542200 ERICH6Q7L0X2 663 aa13.14□□□□□ -0.31
AP3B2-209ENST00000542200 WDR7Q9Y4E6 1490 aa13.14□□□□□ -0.31
AP3B2-209ENST00000542200 CDCA7LQ96GN5 454 aa13.13□□□□□ -0.31
AP3B2-209ENST00000542200 ATP10AO60312 1499 aa13.13□□□□□ -0.31
AP3B2-209ENST00000542200 MAGI2Q86UL8 1455 aa13.12□□□□□ -0.31
AP3B2-209ENST00000542200 RCAN3Q9UKA8 241 aa13.12□□□□□ -0.31
AP3B2-209ENST00000542200 PRDM15P57071 1507 aaPredicted RBP13.12□□□□□ -0.31
AP3B2-209ENST00000542200 ADGRL1O94910 1474 aa13.12□□□□□ -0.31
AP3B2-209ENST00000542200 RTEL1-TNFRSF6BF6WH68 1400 aa13.11□□□□□ -0.31
AP3B2-209ENST00000542200 EIF2AK4Q9P2K8 1649 aaKnown RBP13.11□□□□□ -0.31
AP3B2-209ENST00000542200 WASHC2CQ9Y4E1 1318 aa13.11□□□□□ -0.31
AP3B2-209ENST00000542200 CDCA8Q53HL2 280 aa13.11□□□□□ -0.31
AP3B2-209ENST00000542200 CFAP70Q5T0N1 1121 aa13.11□□□□□ -0.31
AP3B2-209ENST00000542200 GGT6Q6P531 493 aa13.1□□□□□ -0.31
AP3B2-209ENST00000542200 ZFYVE16Q7Z3T8 1539 aa13.1□□□□□ -0.31
AP3B2-209ENST00000542200 MSH5O43196 834 aa13.1□□□□□ -0.31
AP3B2-209ENST00000542200 WDR43Q15061 677 aaKnown RBP eCLIP13.1□□□□□ -0.31
AP3B2-209ENST00000542200 RRP1P56182 461 aaKnown RBP13.09□□□□□ -0.31
AP3B2-209ENST00000542200 RNF123Q5XPI4 1314 aa13.09□□□□□ -0.31
AP3B2-209ENST00000542200 ASXL2Q76L83 1435 aa13.09□□□□□ -0.31
AP3B2-209ENST00000542200 E9PCH4 1651 aa13.09□□□□□ -0.31
AP3B2-209ENST00000542200 ADAMTS8Q9UP79 889 aa13.08□□□□□ -0.31
AP3B2-209ENST00000542200 EXOC6Q8TAG9 804 aa13.08□□□□□ -0.32
AP3B2-209ENST00000542200 ATP7AQ04656 1500 aa13.08□□□□□ -0.32
AP3B2-209ENST00000542200 PDE3BQ13370 1112 aa13.07□□□□□ -0.32
AP3B2-209ENST00000542200 FANCIQ9NVI1 1328 aa13.07□□□□□ -0.32
AP3B2-209ENST00000542200 ADGRF5Q8IZF2 1346 aa13.07□□□□□ -0.32
AP3B2-209ENST00000542200 PLIN1O60240 522 aa13.07□□□□□ -0.32
AP3B2-209ENST00000542200 PPP2R1AP30153 589 aa13.06□□□□□ -0.32
AP3B2-209ENST00000542200 STAC3Q96MF2 364 aa13.06□□□□□ -0.32
AP3B2-209ENST00000542200 SENP3Q9H4L4 574 aaPredicted RBP13.06□□□□□ -0.32
AP3B2-209ENST00000542200 SCAF11Q99590 1463 aaKnown RBP13.05□□□□□ -0.32
AP3B2-209ENST00000542200 TRPM2O94759 1503 aa13.05□□□□□ -0.32
AP3B2-209ENST00000542200 EIF3AQ14152 1382 aaKnown RBP13.05□□□□□ -0.32
AP3B2-209ENST00000542200 OSCARQ8IYS5 282 aa13.05□□□□□ -0.32
AP3B2-209ENST00000542200 PTPRTO14522 1441 aa13.05□□□□□ -0.32
AP3B2-209ENST00000542200 UGGT1Q9NYU2 1555 aa13.04□□□□□ -0.32
AP3B2-209ENST00000542200 LAMC1P11047 1609 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms