RNA–Protein interactions for RNA: ENST00000542107.5

CX3CR1-206, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene CX3CR1, Length 3,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-206ENST00000542107 MYBBP1AQ9BQG0 1328 aaKnown RBP13.52□□□□□ -0.25
CX3CR1-206ENST00000542107 UHRF1BP1Q6BDS2 1440 aa13.52□□□□□ -0.25
CX3CR1-206ENST00000542107 CROCC2H7BZ55 1655 aa13.52□□□□□ -0.25
CX3CR1-206ENST00000542107 SHANK2Q9UPX8 1470 aa13.51□□□□□ -0.25
CX3CR1-206ENST00000542107 ARHGAP5Q13017 1502 aa13.51□□□□□ -0.25
CX3CR1-206ENST00000542107 SMG6Q86US8 1419 aaKnown RBP13.5□□□□□ -0.25
CX3CR1-206ENST00000542107 RALBP1Q15311 655 aa13.5□□□□□ -0.25
CX3CR1-206ENST00000542107 FAM135AQ9P2D6 1515 aa13.49□□□□□ -0.25
CX3CR1-206ENST00000542107 PANK3Q9H999 370 aa13.49□□□□□ -0.25
CX3CR1-206ENST00000542107 PLEKHH2Q8IVE3 1493 aa13.49□□□□□ -0.25
CX3CR1-206ENST00000542107 SYCP2Q9BX26 1530 aa13.48□□□□□ -0.25
CX3CR1-206ENST00000542107 FANCIQ9NVI1 1328 aa13.47□□□□□ -0.25
CX3CR1-206ENST00000542107 SAMD9LQ8IVG5 1584 aa13.47□□□□□ -0.25
CX3CR1-206ENST00000542107 KTN1Q86UP2 1357 aaKnown RBP13.47□□□□□ -0.25
CX3CR1-206ENST00000542107 NLRP13Q86W25 1043 aa13.46□□□□□ -0.25
CX3CR1-206ENST00000542107 AFAP1Q8N556 730 aa13.46□□□□□ -0.26
CX3CR1-206ENST00000542107 CDCA7LQ96GN5 454 aa13.46□□□□□ -0.26
CX3CR1-206ENST00000542107 EFCAB2Q5VUJ9 269 aa13.45□□□□□ -0.26
CX3CR1-206ENST00000542107 BRD4O60885 1362 aaPredicted RBP13.45□□□□□ -0.26
CX3CR1-206ENST00000542107 ARHGEF12Q9NZN5 1544 aa13.45□□□□□ -0.26
CX3CR1-206ENST00000542107 PRAG1Q86YV5 1406 aa13.45□□□□□ -0.26
CX3CR1-206ENST00000542107 DISP3Q9P2K9 1392 aa13.44□□□□□ -0.26
CX3CR1-206ENST00000542107 TMF1P82094 1093 aa13.43□□□□□ -0.26
CX3CR1-206ENST00000542107 EXOC6Q8TAG9 804 aa13.43□□□□□ -0.26
CX3CR1-206ENST00000542107 PLA2R1Q13018 1463 aa13.43□□□□□ -0.26
CX3CR1-206ENST00000542107 POLR1AO95602 1720 aaPredicted RBP13.43□□□□□ -0.26
CX3CR1-206ENST00000542107 PER1O15534 1290 aaPredicted RBP13.43□□□□□ -0.26
CX3CR1-206ENST00000542107 TESK2Q96S53 571 aa13.43□□□□□ -0.26
CX3CR1-206ENST00000542107 RCAN3Q9UKA8 241 aa13.43□□□□□ -0.26
CX3CR1-206ENST00000542107 ERCC6L2Q5T890 1561 aa13.42□□□□□ -0.26
CX3CR1-206ENST00000542107 ARHGEF5Q12774 1597 aa13.42□□□□□ -0.26
CX3CR1-206ENST00000542107 KDM5DQ9BY66 1539 aa13.42□□□□□ -0.26
CX3CR1-206ENST00000542107 CDC42BPBQ9Y5S2 1711 aa13.42□□□□□ -0.26
CX3CR1-206ENST00000542107 PLIN1O60240 522 aa13.41□□□□□ -0.26
CX3CR1-206ENST00000542107 A2MP01023 1474 aa13.41□□□□□ -0.26
CX3CR1-206ENST00000542107 TTC37Q6PGP7 1564 aa13.41□□□□□ -0.26
CX3CR1-206ENST00000542107 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.4□□□□□ -0.26
CX3CR1-206ENST00000542107 RRP1P56182 461 aaKnown RBP13.4□□□□□ -0.26
CX3CR1-206ENST00000542107 LRPPRCP42704 1394 aaKnown RBP13.4□□□□□ -0.26
CX3CR1-206ENST00000542107 SPAG9O60271 1321 aaKnown RBP13.4□□□□□ -0.26
CX3CR1-206ENST00000542107 RNF123Q5XPI4 1314 aa13.39□□□□□ -0.27
CX3CR1-206ENST00000542107 NPM2Q86SE8 214 aaKnown RBP13.38□□□□□ -0.27
CX3CR1-206ENST00000542107 PREX2Q70Z35 1606 aa13.38□□□□□ -0.27
CX3CR1-206ENST00000542107 KNSTRNQ9Y448 316 aa13.37□□□□□ -0.27
CX3CR1-206ENST00000542107 ERBINQ96RT1 1412 aa13.37□□□□□ -0.27
CX3CR1-206ENST00000542107 TRAPPC8Q9Y2L5 1435 aa13.37□□□□□ -0.27
CX3CR1-206ENST00000542107 PARD3Q8TEW0 1356 aa13.37□□□□□ -0.27
CX3CR1-206ENST00000542107 KIF3BO15066 747 aa13.36□□□□□ -0.27
CX3CR1-206ENST00000542107 NBR1Q14596 966 aa13.36□□□□□ -0.27
CX3CR1-206ENST00000542107 ADAMTS8Q9UP79 889 aa13.35□□□□□ -0.27
CX3CR1-206ENST00000542107 CHD1O14646 1710 aa13.35□□□□□ -0.27
CX3CR1-206ENST00000542107 PAK3O75914 559 aaPredicted RBP13.35□□□□□ -0.27
CX3CR1-206ENST00000542107 CHGAP10645 457 aaKnown RBP13.34□□□□□ -0.27
CX3CR1-206ENST00000542107 PLCH2O75038 1416 aa13.34□□□□□ -0.27
CX3CR1-206ENST00000542107 SKAP1Q86WV1 359 aa13.34□□□□□ -0.27
CX3CR1-206ENST00000542107 WDR43Q15061 677 aaKnown RBP eCLIP13.33□□□□□ -0.28
CX3CR1-206ENST00000542107 GPRASP1Q5JY77 1395 aa13.33□□□□□ -0.28
CX3CR1-206ENST00000542107 ANP32AP39687 249 aaKnown RBP13.33□□□□□ -0.28
CX3CR1-206ENST00000542107 NOP58Q9Y2X3 529 aaKnown RBP13.33□□□□□ -0.28
CX3CR1-206ENST00000542107 ABCC2Q92887 1545 aa13.32□□□□□ -0.28
CX3CR1-206ENST00000542107 TRPM1Q7Z4N2 1603 aa13.32□□□□□ -0.28
CX3CR1-206ENST00000542107 PDE3BQ13370 1112 aa13.32□□□□□ -0.28
CX3CR1-206ENST00000542107 SENP3Q9H4L4 574 aaPredicted RBP13.31□□□□□ -0.28
CX3CR1-206ENST00000542107 COL17A1Q9UMD9 1497 aaPredicted RBP13.31□□□□□ -0.28
CX3CR1-206ENST00000542107 CCDC146Q8IYE0 955 aa13.31□□□□□ -0.28
CX3CR1-206ENST00000542107 DUOX2Q9NRD8 1548 aa13.3□□□□□ -0.28
CX3CR1-206ENST00000542107 PPP2R1AP30153 589 aa13.3□□□□□ -0.28
CX3CR1-206ENST00000542107 CFAP70Q5T0N1 1121 aa13.3□□□□□ -0.28
CX3CR1-206ENST00000542107 CRBNQ96SW2 442 aa13.3□□□□□ -0.28
CX3CR1-206ENST00000542107 WASHC2CQ9Y4E1 1318 aa13.28□□□□□ -0.28
CX3CR1-206ENST00000542107 C20orf194Q5TEA3 1177 aa13.28□□□□□ -0.28
CX3CR1-206ENST00000542107 UNC13BO14795 1591 aa13.27□□□□□ -0.28
CX3CR1-206ENST00000542107 ZBTB47Q9UFB7 747 aaPredicted RBP13.27□□□□□ -0.28
CX3CR1-206ENST00000542107 MYO5CQ9NQX4 1742 aa13.27□□□□□ -0.29
CX3CR1-206ENST00000542107 SCAPERQ9BY12 1400 aa13.27□□□□□ -0.29
CX3CR1-206ENST00000542107 MAST1Q9Y2H9 1570 aa13.26□□□□□ -0.29
CX3CR1-206ENST00000542107 CDCA8Q53HL2 280 aa13.26□□□□□ -0.29
CX3CR1-206ENST00000542107 AMER1Q5JTC6 1135 aaPredicted RBP13.26□□□□□ -0.29
CX3CR1-206ENST00000542107 PRDM15P57071 1507 aaPredicted RBP13.25□□□□□ -0.29
CX3CR1-206ENST00000542107 TNNT2P45379 298 aaPredicted RBP13.25□□□□□ -0.29
CX3CR1-206ENST00000542107 IPO9Q96P70 1041 aaKnown RBP13.25□□□□□ -0.29
CX3CR1-206ENST00000542107 MAGI2Q86UL8 1455 aa13.25□□□□□ -0.29
CX3CR1-206ENST00000542107 IQGAP3Q86VI3 1631 aa13.25□□□□□ -0.29
CX3CR1-206ENST00000542107 KANK1Q14678 1352 aa13.25□□□□□ -0.29
CX3CR1-206ENST00000542107 ADGRF5Q8IZF2 1346 aa13.24□□□□□ -0.29
CX3CR1-206ENST00000542107 E9PCH4 1651 aa13.24□□□□□ -0.29
CX3CR1-206ENST00000542107 PDE4AP27815 886 aa13.24□□□□□ -0.29
CX3CR1-206ENST00000542107 GGT6Q6P531 493 aa13.23□□□□□ -0.29
CX3CR1-206ENST00000542107 APAF1O14727 1248 aa13.22□□□□□ -0.29
CX3CR1-206ENST00000542107 BCL11AQ9H165 835 aa13.22□□□□□ -0.29
CX3CR1-206ENST00000542107 PLXNC1O60486 1568 aa13.22□□□□□ -0.29
CX3CR1-206ENST00000542107 ZCCHC11Q5TAX3 1644 aaKnown RBP13.22□□□□□ -0.29
CX3CR1-206ENST00000542107 TCERG1O14776 1098 aaKnown RBP13.22□□□□□ -0.29
CX3CR1-206ENST00000542107 NUTM2DQ5VT03 806 aaPredicted RBP13.22□□□□□ -0.29
CX3CR1-206ENST00000542107 TRAK1Q9UPV9 953 aa13.22□□□□□ -0.29
CX3CR1-206ENST00000542107 PLEKHH1Q9ULM0 1364 aa13.22□□□□□ -0.29
CX3CR1-206ENST00000542107 ATP10AO60312 1499 aa13.22□□□□□ -0.29
CX3CR1-206ENST00000542107 SHROOM2Q13796 1616 aa13.21□□□□□ -0.29
CX3CR1-206ENST00000542107 GOLGA2Q08379 1002 aa13.21□□□□□ -0.29
CX3CR1-206ENST00000542107 ABCC1P33527 1531 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms