RNA–Protein interactions for RNA: ENST00000541864.6

SLC12A4-204, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-204ENST00000541864 DHX29Q7Z478 1369 aaKnown RBP15.49■□□□□ 0.07
SLC12A4-204ENST00000541864 SHANK2Q9UPX8 1470 aa15.48■□□□□ 0.07
SLC12A4-204ENST00000541864 MBD5Q9P267 1494 aa15.48■□□□□ 0.07
SLC12A4-204ENST00000541864 CROCC2H7BZ55 1655 aa15.48■□□□□ 0.07
SLC12A4-204ENST00000541864 TNNT2P45379 298 aaPredicted RBP15.47■□□□□ 0.07
SLC12A4-204ENST00000541864 SYCP2Q9BX26 1530 aa15.46■□□□□ 0.07
SLC12A4-204ENST00000541864 ARID4BQ4LE39 1312 aaPredicted RBP15.45■□□□□ 0.06
SLC12A4-204ENST00000541864 AFAP1Q8N556 730 aa15.45■□□□□ 0.06
SLC12A4-204ENST00000541864 BCORL1Q5H9F3 1711 aa15.45■□□□□ 0.06
SLC12A4-204ENST00000541864 PLEKHH2Q8IVE3 1493 aa15.44■□□□□ 0.06
SLC12A4-204ENST00000541864 PNISRQ8TF01 805 aaKnown RBP15.44■□□□□ 0.06
SLC12A4-204ENST00000541864 RALGAPBQ86X10 1494 aa15.44■□□□□ 0.06
SLC12A4-204ENST00000541864 NUDCQ9Y266 331 aa15.44■□□□□ 0.06
SLC12A4-204ENST00000541864 FAM135AQ9P2D6 1515 aa15.44■□□□□ 0.06
SLC12A4-204ENST00000541864 SAMD9LQ8IVG5 1584 aa15.44■□□□□ 0.06
SLC12A4-204ENST00000541864 NEUROD2Q15784 382 aa15.42■□□□□ 0.06
SLC12A4-204ENST00000541864 UHRF1BP1Q6BDS2 1440 aa15.42■□□□□ 0.06
SLC12A4-204ENST00000541864 SPAG9O60271 1321 aaKnown RBP15.42■□□□□ 0.06
SLC12A4-204ENST00000541864 MYBBP1AQ9BQG0 1328 aaKnown RBP15.42■□□□□ 0.06
SLC12A4-204ENST00000541864 RALBP1Q15311 655 aa15.42■□□□□ 0.06
SLC12A4-204ENST00000541864 ERCC6L2Q5T890 1561 aa15.41■□□□□ 0.06
SLC12A4-204ENST00000541864 ERICH6BQ5W0A0 696 aa15.41■□□□□ 0.06
SLC12A4-204ENST00000541864 PLPPR3Q6T4P5 718 aa15.41■□□□□ 0.06
SLC12A4-204ENST00000541864 KDM5CP41229 1560 aa15.4■□□□□ 0.06
SLC12A4-204ENST00000541864 CHD1O14646 1710 aa15.4■□□□□ 0.06
SLC12A4-204ENST00000541864 EIF5BO60841 1220 aaKnown RBP15.4■□□□□ 0.06
SLC12A4-204ENST00000541864 WDR43Q15061 677 aaKnown RBP eCLIP15.4■□□□□ 0.06
SLC12A4-204ENST00000541864 PANK3Q9H999 370 aa15.4■□□□□ 0.06
SLC12A4-204ENST00000541864 KTN1Q86UP2 1357 aaKnown RBP15.39■□□□□ 0.05
SLC12A4-204ENST00000541864 TMF1P82094 1093 aa15.39■□□□□ 0.05
SLC12A4-204ENST00000541864 ANP32AP39687 249 aaKnown RBP15.38■□□□□ 0.05
SLC12A4-204ENST00000541864 ARHGEF5Q12774 1597 aa15.38■□□□□ 0.05
SLC12A4-204ENST00000541864 TTC37Q6PGP7 1564 aa15.38■□□□□ 0.05
SLC12A4-204ENST00000541864 CANXP27824 592 aaKnown RBP15.38■□□□□ 0.05
SLC12A4-204ENST00000541864 NUTM2DQ5VT03 806 aaPredicted RBP15.38■□□□□ 0.05
SLC12A4-204ENST00000541864 CDC42BPBQ9Y5S2 1711 aa15.38■□□□□ 0.05
SLC12A4-204ENST00000541864 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.38■□□□□ 0.05
SLC12A4-204ENST00000541864 ARHGEF12Q9NZN5 1544 aa15.37■□□□□ 0.05
SLC12A4-204ENST00000541864 SAFB2Q14151 953 aaKnown RBP eCLIP15.37■□□□□ 0.05
SLC12A4-204ENST00000541864 RTL5Q5HYW3 569 aaPredicted RBP15.37■□□□□ 0.05
SLC12A4-204ENST00000541864 NLRP13Q86W25 1043 aa15.37■□□□□ 0.05
SLC12A4-204ENST00000541864 KIF3BO15066 747 aa15.36■□□□□ 0.05
SLC12A4-204ENST00000541864 PRAG1Q86YV5 1406 aa15.36■□□□□ 0.05
SLC12A4-204ENST00000541864 PLIN1O60240 522 aa15.36■□□□□ 0.05
SLC12A4-204ENST00000541864 KNSTRNQ9Y448 316 aa15.36■□□□□ 0.05
SLC12A4-204ENST00000541864 PREX2Q70Z35 1606 aa15.35■□□□□ 0.05
SLC12A4-204ENST00000541864 NPM1P06748 294 aaKnown RBP eCLIP15.34■□□□□ 0.05
SLC12A4-204ENST00000541864 SMG6Q86US8 1419 aaKnown RBP15.34■□□□□ 0.05
SLC12A4-204ENST00000541864 KDM5DQ9BY66 1539 aa15.34■□□□□ 0.05
SLC12A4-204ENST00000541864 ABCC2Q92887 1545 aa15.33■□□□□ 0.05
SLC12A4-204ENST00000541864 TRAPPC8Q9Y2L5 1435 aa15.33■□□□□ 0.04
SLC12A4-204ENST00000541864 GGT6Q6P531 493 aa15.33■□□□□ 0.04
SLC12A4-204ENST00000541864 BRD4O60885 1362 aaPredicted RBP15.33■□□□□ 0.04
SLC12A4-204ENST00000541864 DISP3Q9P2K9 1392 aa15.33■□□□□ 0.04
SLC12A4-204ENST00000541864 PLA2R1Q13018 1463 aa15.32■□□□□ 0.04
SLC12A4-204ENST00000541864 A2MP01023 1474 aa15.32■□□□□ 0.04
SLC12A4-204ENST00000541864 PLCH2O75038 1416 aa15.31■□□□□ 0.04
SLC12A4-204ENST00000541864 POLR1AO95602 1720 aaPredicted RBP15.31■□□□□ 0.04
SLC12A4-204ENST00000541864 TESK2Q96S53 571 aa15.3■□□□□ 0.04
SLC12A4-204ENST00000541864 CCDC146Q8IYE0 955 aa15.29■□□□□ 0.04
SLC12A4-204ENST00000541864 CDCA7LQ96GN5 454 aa15.29■□□□□ 0.04
SLC12A4-204ENST00000541864 RCAN3Q9UKA8 241 aa15.29■□□□□ 0.04
SLC12A4-204ENST00000541864 ERBINQ96RT1 1412 aa15.28■□□□□ 0.04
SLC12A4-204ENST00000541864 MSH5O43196 834 aa15.28■□□□□ 0.04
SLC12A4-204ENST00000541864 OSCARQ8IYS5 282 aa15.28■□□□□ 0.04
SLC12A4-204ENST00000541864 ZBTB47Q9UFB7 747 aaPredicted RBP15.28■□□□□ 0.04
SLC12A4-204ENST00000541864 PER1O15534 1290 aaPredicted RBP15.27■□□□□ 0.04
SLC12A4-204ENST00000541864 DUOX2Q9NRD8 1548 aa15.27■□□□□ 0.04
SLC12A4-204ENST00000541864 MYO5CQ9NQX4 1742 aa15.27■□□□□ 0.03
SLC12A4-204ENST00000541864 KANK1Q14678 1352 aa15.26■□□□□ 0.03
SLC12A4-204ENST00000541864 RGS3P49796 1198 aa15.25■□□□□ 0.03
SLC12A4-204ENST00000541864 EXOC6Q8TAG9 804 aa15.25■□□□□ 0.03
SLC12A4-204ENST00000541864 LAS1LQ9Y4W2 734 aaKnown RBP15.25■□□□□ 0.03
SLC12A4-204ENST00000541864 STAG3Q9UJ98 1225 aa15.25■□□□□ 0.03
SLC12A4-204ENST00000541864 SCAPERQ9BY12 1400 aa15.25■□□□□ 0.03
SLC12A4-204ENST00000541864 RRP1P56182 461 aaKnown RBP15.24■□□□□ 0.03
SLC12A4-204ENST00000541864 UBE2Q2Q8WVN8 375 aa15.23■□□□□ 0.03
SLC12A4-204ENST00000541864 CYB5RLQ6IPT4 315 aa15.23■□□□□ 0.03
SLC12A4-204ENST00000541864 ANO8Q9HCE9 1232 aaPredicted RBP15.23■□□□□ 0.03
SLC12A4-204ENST00000541864 CFAP70Q5T0N1 1121 aa15.22■□□□□ 0.03
SLC12A4-204ENST00000541864 PARD3Q8TEW0 1356 aa15.22■□□□□ 0.03
SLC12A4-204ENST00000541864 CDCA8Q53HL2 280 aa15.22■□□□□ 0.03
SLC12A4-204ENST00000541864 STK26Q9P289 416 aa15.22■□□□□ 0.03
SLC12A4-204ENST00000541864 LRPPRCP42704 1394 aaKnown RBP15.22■□□□□ 0.03
SLC12A4-204ENST00000541864 FANCIQ9NVI1 1328 aa15.21■□□□□ 0.03
SLC12A4-204ENST00000541864 PPM1GO15355 546 aaPredicted RBP15.21■□□□□ 0.03
SLC12A4-204ENST00000541864 SKAP1Q86WV1 359 aa15.21■□□□□ 0.03
SLC12A4-204ENST00000541864 FRAT1Q92837 279 aaPredicted RBP15.21■□□□□ 0.03
SLC12A4-204ENST00000541864 ADAMTS8Q9UP79 889 aa15.21■□□□□ 0.03
SLC12A4-204ENST00000541864 ZCCHC11Q5TAX3 1644 aaKnown RBP15.21■□□□□ 0.03
SLC12A4-204ENST00000541864 GPRASP1Q5JY77 1395 aa15.2■□□□□ 0.02
SLC12A4-204ENST00000541864 TRPM1Q7Z4N2 1603 aa15.2■□□□□ 0.02
SLC12A4-204ENST00000541864 SHROOM2Q13796 1616 aa15.2■□□□□ 0.02
SLC12A4-204ENST00000541864 UNC13BO14795 1591 aa15.19■□□□□ 0.02
SLC12A4-204ENST00000541864 MAST1Q9Y2H9 1570 aa15.19■□□□□ 0.02
SLC12A4-204ENST00000541864 COL17A1Q9UMD9 1497 aaPredicted RBP15.19■□□□□ 0.02
SLC12A4-204ENST00000541864 TRAK1Q9UPV9 953 aa15.19■□□□□ 0.02
SLC12A4-204ENST00000541864 PLEKHG5O94827 1062 aa15.18■□□□□ 0.02
SLC12A4-204ENST00000541864 PDE3BQ13370 1112 aa15.18■□□□□ 0.02
SLC12A4-204ENST00000541864 FANCAO15360 1455 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms