RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 PNISRQ8TF01 805 aaKnown RBP19.12■□□□□ 0.65
UBE3B-210ENST00000539599 ARHGAP5Q13017 1502 aa19.11■□□□□ 0.65
UBE3B-210ENST00000539599 CHD1O14646 1710 aa19.11■□□□□ 0.65
UBE3B-210ENST00000539599 PLEKHH2Q8IVE3 1493 aa19.09■□□□□ 0.65
UBE3B-210ENST00000539599 PLA2R1Q13018 1463 aa19.08■□□□□ 0.64
UBE3B-210ENST00000539599 PREX2Q70Z35 1606 aa19.08■□□□□ 0.64
UBE3B-210ENST00000539599 CCDC144AA2RUR9 1427 aa19.07■□□□□ 0.64
UBE3B-210ENST00000539599 KDM5DQ9BY66 1539 aa19.07■□□□□ 0.64
UBE3B-210ENST00000539599 ARHGEF5Q12774 1597 aa19.07■□□□□ 0.64
UBE3B-210ENST00000539599 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.06■□□□□ 0.64
UBE3B-210ENST00000539599 NUDCQ9Y266 331 aa19.06■□□□□ 0.64
UBE3B-210ENST00000539599 CC2D1BQ5T0F9 858 aaKnown RBP19.05■□□□□ 0.64
UBE3B-210ENST00000539599 ARHGEF12Q9NZN5 1544 aa19.05■□□□□ 0.64
UBE3B-210ENST00000539599 PRAG1Q86YV5 1406 aa19.03■□□□□ 0.64
UBE3B-210ENST00000539599 SMG6Q86US8 1419 aaKnown RBP19.03■□□□□ 0.64
UBE3B-210ENST00000539599 A2MP01023 1474 aa19.02■□□□□ 0.63
UBE3B-210ENST00000539599 DISP3Q9P2K9 1392 aa19.01■□□□□ 0.63
UBE3B-210ENST00000539599 ARID4BQ4LE39 1312 aaPredicted RBP19■□□□□ 0.63
UBE3B-210ENST00000539599 MYBBP1AQ9BQG0 1328 aaKnown RBP18.99■□□□□ 0.63
UBE3B-210ENST00000539599 TRPM1Q7Z4N2 1603 aa18.97■□□□□ 0.63
UBE3B-210ENST00000539599 AFAP1Q8N556 730 aa18.97■□□□□ 0.63
UBE3B-210ENST00000539599 ERICH6BQ5W0A0 696 aa18.96■□□□□ 0.63
UBE3B-210ENST00000539599 CDCA7LQ96GN5 454 aa18.96■□□□□ 0.63
UBE3B-210ENST00000539599 TESK2Q96S53 571 aa18.96■□□□□ 0.63
UBE3B-210ENST00000539599 TRAPPC8Q9Y2L5 1435 aa18.95■□□□□ 0.62
UBE3B-210ENST00000539599 CCDC136Q96JN2 1154 aa18.95■□□□□ 0.62
UBE3B-210ENST00000539599 PANK3Q9H999 370 aa18.95■□□□□ 0.62
UBE3B-210ENST00000539599 PER1O15534 1290 aaPredicted RBP18.94■□□□□ 0.62
UBE3B-210ENST00000539599 RSPH4AQ5TD94 716 aa18.94■□□□□ 0.62
UBE3B-210ENST00000539599 LRPPRCP42704 1394 aaKnown RBP18.93■□□□□ 0.62
UBE3B-210ENST00000539599 E9PCH4 1651 aa18.92■□□□□ 0.62
UBE3B-210ENST00000539599 ABCC2Q92887 1545 aa18.92■□□□□ 0.62
UBE3B-210ENST00000539599 RALBP1Q15311 655 aa18.92■□□□□ 0.62
UBE3B-210ENST00000539599 MYO5CQ9NQX4 1742 aa18.91■□□□□ 0.62
UBE3B-210ENST00000539599 BRD4O60885 1362 aaPredicted RBP18.91■□□□□ 0.62
UBE3B-210ENST00000539599 KTN1Q86UP2 1357 aaKnown RBP18.91■□□□□ 0.62
UBE3B-210ENST00000539599 UNC13BO14795 1591 aa18.91■□□□□ 0.62
UBE3B-210ENST00000539599 FANCIQ9NVI1 1328 aa18.9■□□□□ 0.62
UBE3B-210ENST00000539599 RNF123Q5XPI4 1314 aa18.89■□□□□ 0.61
UBE3B-210ENST00000539599 SHROOM2Q13796 1616 aa18.89■□□□□ 0.61
UBE3B-210ENST00000539599 NLRP13Q86W25 1043 aa18.89■□□□□ 0.61
UBE3B-210ENST00000539599 EXOC6Q8TAG9 804 aa18.89■□□□□ 0.61
UBE3B-210ENST00000539599 MYT1LQ9UL68 1186 aa18.89■□□□□ 0.61
UBE3B-210ENST00000539599 PARD3Q8TEW0 1356 aa18.88■□□□□ 0.61
UBE3B-210ENST00000539599 PLIN1O60240 522 aa18.88■□□□□ 0.61
UBE3B-210ENST00000539599 EFCAB2Q5VUJ9 269 aa18.87■□□□□ 0.61
UBE3B-210ENST00000539599 ERBINQ96RT1 1412 aa18.87■□□□□ 0.61
UBE3B-210ENST00000539599 COL17A1Q9UMD9 1497 aaPredicted RBP18.86■□□□□ 0.61
UBE3B-210ENST00000539599 ZCCHC11Q5TAX3 1644 aaKnown RBP18.86■□□□□ 0.61
UBE3B-210ENST00000539599 IQGAP3Q86VI3 1631 aa18.86■□□□□ 0.61
UBE3B-210ENST00000539599 SKAP1Q86WV1 359 aa18.86■□□□□ 0.61
UBE3B-210ENST00000539599 MAST1Q9Y2H9 1570 aa18.85■□□□□ 0.61
UBE3B-210ENST00000539599 PLCH2O75038 1416 aa18.85■□□□□ 0.61
UBE3B-210ENST00000539599 ERICH6Q7L0X2 663 aa18.85■□□□□ 0.61
UBE3B-210ENST00000539599 GPRASP1Q5JY77 1395 aa18.85■□□□□ 0.61
UBE3B-210ENST00000539599 DUOX2Q9NRD8 1548 aa18.84■□□□□ 0.61
UBE3B-210ENST00000539599 SPAG9O60271 1321 aaKnown RBP18.83■□□□□ 0.61
UBE3B-210ENST00000539599 PRDM15P57071 1507 aaPredicted RBP18.83■□□□□ 0.61
UBE3B-210ENST00000539599 RRP1P56182 461 aaKnown RBP18.83■□□□□ 0.61
UBE3B-210ENST00000539599 PLXNC1O60486 1568 aa18.83■□□□□ 0.6
UBE3B-210ENST00000539599 RCAN3Q9UKA8 241 aa18.82■□□□□ 0.6
UBE3B-210ENST00000539599 TMF1P82094 1093 aa18.82■□□□□ 0.6
UBE3B-210ENST00000539599 PAK3O75914 559 aaPredicted RBP18.8■□□□□ 0.6
UBE3B-210ENST00000539599 ABCC1P33527 1531 aa18.79■□□□□ 0.6
UBE3B-210ENST00000539599 ADAMTS8Q9UP79 889 aa18.78■□□□□ 0.6
UBE3B-210ENST00000539599 MAGI2Q86UL8 1455 aa18.78■□□□□ 0.6
UBE3B-210ENST00000539599 KIF3BO15066 747 aa18.77■□□□□ 0.6
UBE3B-210ENST00000539599 ATP10AO60312 1499 aa18.75■□□□□ 0.59
UBE3B-210ENST00000539599 UGGT1Q9NYU2 1555 aa18.75■□□□□ 0.59
UBE3B-210ENST00000539599 SENP3Q9H4L4 574 aaPredicted RBP18.75■□□□□ 0.59
UBE3B-210ENST00000539599 CFAP70Q5T0N1 1121 aa18.73■□□□□ 0.59
UBE3B-210ENST00000539599 C20orf194Q5TEA3 1177 aa18.73■□□□□ 0.59
UBE3B-210ENST00000539599 SCAPERQ9BY12 1400 aa18.73■□□□□ 0.59
UBE3B-210ENST00000539599 NPM2Q86SE8 214 aaKnown RBP18.72■□□□□ 0.59
UBE3B-210ENST00000539599 WDR7Q9Y4E6 1490 aa18.72■□□□□ 0.59
UBE3B-210ENST00000539599 KNSTRNQ9Y448 316 aa18.72■□□□□ 0.59
UBE3B-210ENST00000539599 CCDC146Q8IYE0 955 aa18.71■□□□□ 0.59
UBE3B-210ENST00000539599 ZFYVE16Q7Z3T8 1539 aa18.71■□□□□ 0.59
UBE3B-210ENST00000539599 CLTCL1P53675 1640 aa18.71■□□□□ 0.59
UBE3B-210ENST00000539599 PPP2R1AP30153 589 aa18.71■□□□□ 0.59
UBE3B-210ENST00000539599 NBR1Q14596 966 aa18.71■□□□□ 0.59
UBE3B-210ENST00000539599 MADDQ8WXG6 1647 aa18.71■□□□□ 0.59
UBE3B-210ENST00000539599 CLASP1Q7Z460 1538 aa18.7■□□□□ 0.58
UBE3B-210ENST00000539599 EIF2AK4Q9P2K8 1649 aaKnown RBP18.7■□□□□ 0.58
UBE3B-210ENST00000539599 CRBNQ96SW2 442 aa18.69■□□□□ 0.58
UBE3B-210ENST00000539599 ADGRF5Q8IZF2 1346 aa18.69■□□□□ 0.58
UBE3B-210ENST00000539599 RNF17Q9BXT8 1623 aaKnown RBP18.69■□□□□ 0.58
UBE3B-210ENST00000539599 AMER1Q5JTC6 1135 aaPredicted RBP18.69■□□□□ 0.58
UBE3B-210ENST00000539599 PLEKHH1Q9ULM0 1364 aa18.68■□□□□ 0.58
UBE3B-210ENST00000539599 LAMC1P11047 1609 aa18.68■□□□□ 0.58
UBE3B-210ENST00000539599 CHGAP10645 457 aaKnown RBP18.68■□□□□ 0.58
UBE3B-210ENST00000539599 BLMP54132 1417 aaPredicted RBP18.67■□□□□ 0.58
UBE3B-210ENST00000539599 FANCAO15360 1455 aa18.67■□□□□ 0.58
UBE3B-210ENST00000539599 NOP58Q9Y2X3 529 aaKnown RBP18.66■□□□□ 0.58
UBE3B-210ENST00000539599 TRPM2O94759 1503 aa18.65■□□□□ 0.58
UBE3B-210ENST00000539599 WDR43Q15061 677 aaKnown RBP eCLIP18.64■□□□□ 0.57
UBE3B-210ENST00000539599 SPHKAPQ2M3C7 1700 aa18.64■□□□□ 0.57
UBE3B-210ENST00000539599 UHRF1BP1LA0JNW5 1464 aa18.63■□□□□ 0.57
UBE3B-210ENST00000539599 PDE3BQ13370 1112 aa18.63■□□□□ 0.57
UBE3B-210ENST00000539599 NUTM2DQ5VT03 806 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms