RNA–Protein interactions for RNA: ENST00000538243.1

KDM2B-207, Transcript of lysine demethylase 2B, humanhuman

TSL 2

Gene KDM2B, Length 4,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-207ENST00000538243 PLPPR3Q6T4P5 718 aa20.76■□□□□ 0.91
KDM2B-207ENST00000538243 MSNP26038 577 aaKnown RBP20.75■□□□□ 0.91
KDM2B-207ENST00000538243 SMC4Q9NTJ3 1288 aa20.75■□□□□ 0.91
KDM2B-207ENST00000538243 PRKCSHP14314 528 aaPredicted RBP20.75■□□□□ 0.91
KDM2B-207ENST00000538243 RSPH6AQ9H0K4 717 aa20.73■□□□□ 0.91
KDM2B-207ENST00000538243 CCDC144AA2RUR9 1427 aa20.73■□□□□ 0.91
KDM2B-207ENST00000538243 BRD4O60885 1362 aaPredicted RBP20.72■□□□□ 0.91
KDM2B-207ENST00000538243 NBPF1Q3BBV0 1214 aa20.72■□□□□ 0.91
KDM2B-207ENST00000538243 PANK1Q8TE04 598 aa20.72■□□□□ 0.91
KDM2B-207ENST00000538243 NPM1P06748 294 aaKnown RBP eCLIP20.71■□□□□ 0.91
KDM2B-207ENST00000538243 FYCO1Q9BQS8 1478 aa20.71■□□□□ 0.91
KDM2B-207ENST00000538243 GBP4Q96PP9 640 aa20.71■□□□□ 0.91
KDM2B-207ENST00000538243 SRPK2P78362 688 aaKnown RBP20.7■□□□□ 0.9
KDM2B-207ENST00000538243 PLEKHG5O94827 1062 aa20.69■□□□□ 0.9
KDM2B-207ENST00000538243 VSIG10Q8N0Z9 540 aa20.69■□□□□ 0.9
KDM2B-207ENST00000538243 STK26Q9P289 416 aa20.69■□□□□ 0.9
KDM2B-207ENST00000538243 POGKQ9P215 609 aa20.69■□□□□ 0.9
KDM2B-207ENST00000538243 CGNL1Q0VF96 1302 aa20.67■□□□□ 0.9
KDM2B-207ENST00000538243 E9PSI1 815 aa20.67■□□□□ 0.9
KDM2B-207ENST00000538243 CASC1Q6TDU7 716 aa20.67■□□□□ 0.9
KDM2B-207ENST00000538243 HSP90AA2PQ14568 343 aaPredicted RBP20.67■□□□□ 0.9
KDM2B-207ENST00000538243 C20orf194Q5TEA3 1177 aa20.66■□□□□ 0.9
KDM2B-207ENST00000538243 NUTM2DQ5VT03 806 aaPredicted RBP20.64■□□□□ 0.89
KDM2B-207ENST00000538243 BCAR3O75815 825 aa20.64■□□□□ 0.89
KDM2B-207ENST00000538243 TRAK1Q9UPV9 953 aa20.63■□□□□ 0.89
KDM2B-207ENST00000538243 JPH4Q96JJ6 628 aa20.63■□□□□ 0.89
KDM2B-207ENST00000538243 GGT6Q6P531 493 aa20.62■□□□□ 0.89
KDM2B-207ENST00000538243 ESF1Q9H501 851 aaKnown RBP20.62■□□□□ 0.89
KDM2B-207ENST00000538243 PDS5BQ9NTI5 1447 aa20.62■□□□□ 0.89
KDM2B-207ENST00000538243 ELL2O00472 640 aaPredicted RBP20.61■□□□□ 0.89
KDM2B-207ENST00000538243 SOX12O15370 315 aa20.61■□□□□ 0.89
KDM2B-207ENST00000538243 IPO8O15397 1037 aaKnown RBP20.61■□□□□ 0.89
KDM2B-207ENST00000538243 GAPVD1Q14C86 1478 aa20.6■□□□□ 0.89
KDM2B-207ENST00000538243 ANKRD50Q9ULJ7 1429 aa20.6■□□□□ 0.89
KDM2B-207ENST00000538243 CARMIL2Q6F5E8 1435 aa20.6■□□□□ 0.89
KDM2B-207ENST00000538243 KIF3BO15066 747 aa20.59■□□□□ 0.89
KDM2B-207ENST00000538243 NCAPD3P42695 1498 aa20.59■□□□□ 0.89
KDM2B-207ENST00000538243 FOXD4L5Q5VV16 416 aaPredicted RBP20.59■□□□□ 0.89
KDM2B-207ENST00000538243 FOXD4L4Q8WXT5 416 aaPredicted RBP20.59■□□□□ 0.89
KDM2B-207ENST00000538243 PCF11O94913 1555 aaKnown RBP20.58■□□□□ 0.89
KDM2B-207ENST00000538243 NCOA1Q15788 1441 aa20.56■□□□□ 0.88
KDM2B-207ENST00000538243 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.56■□□□□ 0.88
KDM2B-207ENST00000538243 NOL8Q76FK4 1167 aaKnown RBP20.55■□□□□ 0.88
KDM2B-207ENST00000538243 CHMP4BQ9H444 224 aaKnown RBP20.55■□□□□ 0.88
KDM2B-207ENST00000538243 PPP2R1AP30153 589 aa20.55■□□□□ 0.88
KDM2B-207ENST00000538243 PTPRKQ15262 1439 aa20.55■□□□□ 0.88
KDM2B-207ENST00000538243 DDX49Q9Y6V7 483 aaKnown RBP20.55■□□□□ 0.88
KDM2B-207ENST00000538243 ZKSCAN2Q63HK3 967 aa20.54■□□□□ 0.88
KDM2B-207ENST00000538243 CALD1Q05682 793 aaKnown RBP20.54■□□□□ 0.88
KDM2B-207ENST00000538243 ANKRD45Q5TZF3 282 aa20.53■□□□□ 0.88
KDM2B-207ENST00000538243 KANK1Q14678 1352 aa20.53■□□□□ 0.88
KDM2B-207ENST00000538243 DDX11L8A8MPP1 907 aa20.53■□□□□ 0.88
KDM2B-207ENST00000538243 CHMP5Q9NZZ3 219 aa20.53■□□□□ 0.88
KDM2B-207ENST00000538243 ANKRD30BQ9BXX2 1392 aa20.52■□□□□ 0.88
KDM2B-207ENST00000538243 EFCAB2Q5VUJ9 269 aa20.52■□□□□ 0.88
KDM2B-207ENST00000538243 C22orf23Q9BZE7 217 aa20.51■□□□□ 0.87
KDM2B-207ENST00000538243 LNPKQ9C0E8 428 aa20.51■□□□□ 0.87
KDM2B-207ENST00000538243 AQRO60306 1485 aaKnown RBP eCLIP20.51■□□□□ 0.877e-9■■■■■ 30.2
KDM2B-207ENST00000538243 FOXD4L6Q3SYB3 417 aaPredicted RBP20.51■□□□□ 0.87
KDM2B-207ENST00000538243 FOXD4L3Q6VB84 417 aaPredicted RBP20.51■□□□□ 0.87
KDM2B-207ENST00000538243 MIA2Q96PC5 1412 aa20.49■□□□□ 0.87
KDM2B-207ENST00000538243 C14orf37Q86TY3 774 aa20.49■□□□□ 0.87
KDM2B-207ENST00000538243 EIF3AQ14152 1382 aaKnown RBP20.49■□□□□ 0.87
KDM2B-207ENST00000538243 ERCC6Q03468 1493 aa20.48■□□□□ 0.87
KDM2B-207ENST00000538243 KIAA1107Q9UPP5 1409 aa20.48■□□□□ 0.87
KDM2B-207ENST00000538243 DZIP1LQ8IYY4 767 aaKnown RBP20.48■□□□□ 0.87
KDM2B-207ENST00000538243 PDZRN3Q9UPQ7 1066 aa20.47■□□□□ 0.87
KDM2B-207ENST00000538243 RSPH4AQ5TD94 716 aa20.46■□□□□ 0.87
KDM2B-207ENST00000538243 TRAK2O60296 914 aa20.46■□□□□ 0.87
KDM2B-207ENST00000538243 SPAG9O60271 1321 aaKnown RBP20.45■□□□□ 0.86
KDM2B-207ENST00000538243 TCP11L2Q8N4U5 519 aa20.44■□□□□ 0.86
KDM2B-207ENST00000538243 TAOK2Q9UL54 1235 aa20.44■□□□□ 0.86
KDM2B-207ENST00000538243 EFCAB5A4FU69 1503 aa20.43■□□□□ 0.86
KDM2B-207ENST00000538243 FAM43AQ8N2R8 423 aa20.42■□□□□ 0.86
KDM2B-207ENST00000538243 MAP3K1Q13233 1512 aa20.42■□□□□ 0.86
KDM2B-207ENST00000538243 DAPK1P53355 1430 aa20.41■□□□□ 0.86
KDM2B-207ENST00000538243 EHBP1L1Q8N3D4 1523 aa20.41■□□□□ 0.86
KDM2B-207ENST00000538243 CDK13Q14004 1512 aaKnown RBP20.41■□□□□ 0.86
KDM2B-207ENST00000538243 PRG4Q92954 1404 aaPredicted RBP20.41■□□□□ 0.86
KDM2B-207ENST00000538243 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.4■□□□□ 0.86
KDM2B-207ENST00000538243 NESP48681 1621 aa20.4■□□□□ 0.86
KDM2B-207ENST00000538243 KCNJ4P48050 445 aa20.4■□□□□ 0.86
KDM2B-207ENST00000538243 FAM13BQ9NYF5 915 aa20.4■□□□□ 0.86
KDM2B-207ENST00000538243 POLA1P09884 1462 aaPredicted RBP20.39■□□□□ 0.85
KDM2B-207ENST00000538243 RUNDC1Q96C34 613 aa20.39■□□□□ 0.85
KDM2B-207ENST00000538243 PTPN23Q9H3S7 1636 aa20.39■□□□□ 0.85
KDM2B-207ENST00000538243 PTMSP20962 102 aa20.39■□□□□ 0.85
KDM2B-207ENST00000538243 OS9Q13438 667 aaPredicted RBP20.39■□□□□ 0.85
KDM2B-207ENST00000538243 SLC4A10Q6U841 1118 aa20.39■□□□□ 0.85
KDM2B-207ENST00000538243 PRDM2Q13029 1718 aa20.39■□□□□ 0.85
KDM2B-207ENST00000538243 DDX19BQ9UMR2 479 aa20.38■□□□□ 0.85
KDM2B-207ENST00000538243 HDGFL2Q7Z4V5 671 aaPredicted RBP20.38■□□□□ 0.85
KDM2B-207ENST00000538243 MTHFSP49914 203 aa20.38■□□□□ 0.85
KDM2B-207ENST00000538243 AMER1Q5JTC6 1135 aaPredicted RBP20.37■□□□□ 0.85
KDM2B-207ENST00000538243 CFAP70Q5T0N1 1121 aa20.37■□□□□ 0.85
KDM2B-207ENST00000538243 MRE11P49959 708 aa20.37■□□□□ 0.85
KDM2B-207ENST00000538243 KIAA2012Q0VF49 1180 aa20.37■□□□□ 0.85
KDM2B-207ENST00000538243 MCCP23508 829 aa20.37■□□□□ 0.85
KDM2B-207ENST00000538243 WASHC2CQ9Y4E1 1318 aa20.36■□□□□ 0.85
KDM2B-207ENST00000538243 PDE3AQ14432 1141 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms