RNA–Protein interactions for RNA: ENST00000537578.5

TCF4-205, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-205ENST00000537578 ARHGEF12Q9NZN5 1544 aa12.8□□□□□ -0.36
TCF4-205ENST00000537578 CCDC141Q6ZP82 1450 aa12.79□□□□□ -0.36
TCF4-205ENST00000537578 MYT1LQ9UL68 1186 aa12.79□□□□□ -0.36
TCF4-205ENST00000537578 RSPH4AQ5TD94 716 aa12.79□□□□□ -0.36
TCF4-205ENST00000537578 KIF7Q2M1P5 1343 aa12.79□□□□□ -0.36
TCF4-205ENST00000537578 CCER2I3L3R5 266 aa12.78□□□□□ -0.36
TCF4-205ENST00000537578 PLEKHH2Q8IVE3 1493 aa12.78□□□□□ -0.36
TCF4-205ENST00000537578 CLASP1Q7Z460 1538 aa12.78□□□□□ -0.36
TCF4-205ENST00000537578 CCDC7Q96M83 1385 aa12.77□□□□□ -0.36
TCF4-205ENST00000537578 TRAPPC8Q9Y2L5 1435 aa12.76□□□□□ -0.37
TCF4-205ENST00000537578 SHANK2Q9UPX8 1470 aa12.76□□□□□ -0.37
TCF4-205ENST00000537578 CARD11Q9BXL7 1154 aa12.76□□□□□ -0.37
TCF4-205ENST00000537578 PREX2Q70Z35 1606 aa12.76□□□□□ -0.37
TCF4-205ENST00000537578 SENP3-EIF4A1A0A087X0R7 540 aa12.75□□□□□ -0.37
TCF4-205ENST00000537578 SUPT16HQ9Y5B9 1047 aaKnown RBP12.75□□□□□ -0.37
TCF4-205ENST00000537578 PLCH2O75038 1416 aa12.75□□□□□ -0.37
TCF4-205ENST00000537578 SPATA31E1Q6ZUB1 1445 aa12.75□□□□□ -0.37
TCF4-205ENST00000537578 NBPF1Q3BBV0 1214 aa12.74□□□□□ -0.37
TCF4-205ENST00000537578 ZCCHC11Q5TAX3 1644 aaKnown RBP12.74□□□□□ -0.37
TCF4-205ENST00000537578 ST20-MTHFSA0A0A6YYL1 179 aa12.74□□□□□ -0.37
TCF4-205ENST00000537578 OSCARQ8IYS5 282 aa12.74□□□□□ -0.37
TCF4-205ENST00000537578 ARHGEF5Q12774 1597 aa12.74□□□□□ -0.37
TCF4-205ENST00000537578 USP47Q96K76 1375 aa12.73□□□□□ -0.37
TCF4-205ENST00000537578 HNRNPUQ00839 825 aaKnown RBP eCLIP12.73□□□□□ -0.37
TCF4-205ENST00000537578 FAM9BQ8IZU0 186 aa12.73□□□□□ -0.37
TCF4-205ENST00000537578 SPAG9O60271 1321 aaKnown RBP12.72□□□□□ -0.37
TCF4-205ENST00000537578 PRKRIP1Q9H875 184 aaPredicted RBP12.72□□□□□ -0.37
TCF4-205ENST00000537578 FAM135AQ9P2D6 1515 aa12.71□□□□□ -0.37
TCF4-205ENST00000537578 PLA2R1Q13018 1463 aa12.7□□□□□ -0.38
TCF4-205ENST00000537578 CNTLNQ9NXG0 1405 aa12.69□□□□□ -0.38
TCF4-205ENST00000537578 MYO5CQ9NQX4 1742 aa12.68□□□□□ -0.38
TCF4-205ENST00000537578 UHRF1BP1LA0JNW5 1464 aa12.68□□□□□ -0.38
TCF4-205ENST00000537578 MRS2Q9HD23 443 aa12.68□□□□□ -0.38
TCF4-205ENST00000537578 CCDC144AA2RUR9 1427 aa12.67□□□□□ -0.38
TCF4-205ENST00000537578 KIF3BO15066 747 aa12.67□□□□□ -0.38
TCF4-205ENST00000537578 NPM1P06748 294 aaKnown RBP eCLIP12.66□□□□□ -0.38
TCF4-205ENST00000537578 SCAPERQ9BY12 1400 aa12.66□□□□□ -0.38
TCF4-205ENST00000537578 BCORL1Q5H9F3 1711 aa12.65□□□□□ -0.38
TCF4-205ENST00000537578 ROCK2O75116 1388 aaKnown RBP12.65□□□□□ -0.38
TCF4-205ENST00000537578 ASXL2Q76L83 1435 aa12.65□□□□□ -0.39
TCF4-205ENST00000537578 KDM5DQ9BY66 1539 aa12.64□□□□□ -0.39
TCF4-205ENST00000537578 WDR7Q9Y4E6 1490 aa12.64□□□□□ -0.39
TCF4-205ENST00000537578 IRX6P78412 446 aaPredicted RBP12.63□□□□□ -0.39
TCF4-205ENST00000537578 FANCAO15360 1455 aa12.63□□□□□ -0.39
TCF4-205ENST00000537578 UHRF1BP1Q6BDS2 1440 aa12.62□□□□□ -0.39
TCF4-205ENST00000537578 ABCC1P33527 1531 aa12.61□□□□□ -0.39
TCF4-205ENST00000537578 DUOX2Q9NRD8 1548 aa12.6□□□□□ -0.39
TCF4-205ENST00000537578 CYB5RLQ6IPT4 315 aa12.6□□□□□ -0.39
TCF4-205ENST00000537578 DHX29Q7Z478 1369 aaKnown RBP12.6□□□□□ -0.39
TCF4-205ENST00000537578 MAST1Q9Y2H9 1570 aa12.6□□□□□ -0.39
TCF4-205ENST00000537578 A2MP01023 1474 aa12.59□□□□□ -0.39
TCF4-205ENST00000537578 RALGAPBQ86X10 1494 aa12.59□□□□□ -0.39
TCF4-205ENST00000537578 KDM5CP41229 1560 aa12.59□□□□□ -0.39
TCF4-205ENST00000537578 RAPGEF3O95398 923 aa12.58□□□□□ -0.39
TCF4-205ENST00000537578 FBXO3Q9UK99 471 aa12.58□□□□□ -0.39
TCF4-205ENST00000537578 GGT6Q6P531 493 aa12.58□□□□□ -0.4
TCF4-205ENST00000537578 PRAG1Q86YV5 1406 aa12.58□□□□□ -0.4
TCF4-205ENST00000537578 ADGRL1O94910 1474 aa12.58□□□□□ -0.4
TCF4-205ENST00000537578 SENP3Q9H4L4 574 aaPredicted RBP12.58□□□□□ -0.4
TCF4-205ENST00000537578 ERBINQ96RT1 1412 aa12.57□□□□□ -0.4
TCF4-205ENST00000537578 PLXNC1O60486 1568 aa12.56□□□□□ -0.4
TCF4-205ENST00000537578 UNC13BO14795 1591 aa12.56□□□□□ -0.4
TCF4-205ENST00000537578 CHGAP10645 457 aaKnown RBP12.54□□□□□ -0.4
TCF4-205ENST00000537578 TESK2Q96S53 571 aa12.54□□□□□ -0.4
TCF4-205ENST00000537578 IQGAP3Q86VI3 1631 aa12.53□□□□□ -0.4
TCF4-205ENST00000537578 ZFYVE16Q7Z3T8 1539 aa12.53□□□□□ -0.4
TCF4-205ENST00000537578 CD109Q6YHK3 1445 aa12.53□□□□□ -0.4
TCF4-205ENST00000537578 NEFLP07196 543 aa12.53□□□□□ -0.4
TCF4-205ENST00000537578 TMC1Q8TDI8 760 aa12.53□□□□□ -0.4
TCF4-205ENST00000537578 RTEL1-TNFRSF6BF6WH68 1400 aa12.53□□□□□ -0.4
TCF4-205ENST00000537578 CC2D1BQ5T0F9 858 aaKnown RBP12.52□□□□□ -0.4
TCF4-205ENST00000537578 SALL2Q9Y467 1007 aaPredicted RBP12.52□□□□□ -0.4
TCF4-205ENST00000537578 DISP3Q9P2K9 1392 aa12.52□□□□□ -0.4
TCF4-205ENST00000537578 CFAP65Q6ZU64 1925 aaKnown RBP12.51□□□□□ -0.41
TCF4-205ENST00000537578 ATP7AQ04656 1500 aa12.51□□□□□ -0.41
TCF4-205ENST00000537578 CFAP70Q5T0N1 1121 aa12.51□□□□□ -0.41
TCF4-205ENST00000537578 NUTM2DQ5VT03 806 aaPredicted RBP12.51□□□□□ -0.41
TCF4-205ENST00000537578 PANK3Q9H999 370 aa12.51□□□□□ -0.41
TCF4-205ENST00000537578 ATP10AO60312 1499 aa12.5□□□□□ -0.41
TCF4-205ENST00000537578 MAGI2Q86UL8 1455 aa12.5□□□□□ -0.41
TCF4-205ENST00000537578 ABCA9Q8IUA7 1624 aa12.5□□□□□ -0.41
TCF4-205ENST00000537578 ARID4BQ4LE39 1312 aaPredicted RBP12.49□□□□□ -0.41
TCF4-205ENST00000537578 UGGT1Q9NYU2 1555 aa12.49□□□□□ -0.41
TCF4-205ENST00000537578 KANK1Q14678 1352 aa12.49□□□□□ -0.41
TCF4-205ENST00000537578 E9PCH4 1651 aa12.49□□□□□ -0.41
TCF4-205ENST00000537578 PER1O15534 1290 aaPredicted RBP12.49□□□□□ -0.41
TCF4-205ENST00000537578 PNISRQ8TF01 805 aaKnown RBP12.49□□□□□ -0.41
TCF4-205ENST00000537578 ADGRF5Q8IZF2 1346 aa12.49□□□□□ -0.41
TCF4-205ENST00000537578 TRPM1Q7Z4N2 1603 aa12.48□□□□□ -0.41
TCF4-205ENST00000537578 ARAP3Q8WWN8 1544 aa12.47□□□□□ -0.41
TCF4-205ENST00000537578 POLR1AO95602 1720 aaPredicted RBP12.46□□□□□ -0.41
TCF4-205ENST00000537578 GPRASP1Q5JY77 1395 aa12.46□□□□□ -0.41
TCF4-205ENST00000537578 TMF1P82094 1093 aa12.46□□□□□ -0.41
TCF4-205ENST00000537578 PPP6R1Q9UPN7 881 aa12.46□□□□□ -0.42
TCF4-205ENST00000537578 WASHC2CQ9Y4E1 1318 aa12.45□□□□□ -0.42
TCF4-205ENST00000537578 PTPRTO14522 1441 aa12.44□□□□□ -0.42
TCF4-205ENST00000537578 ZBED9Q6R2W3 1325 aa12.44□□□□□ -0.42
TCF4-205ENST00000537578 KIDINS220Q9ULH0 1771 aa12.44□□□□□ -0.42
TCF4-205ENST00000537578 INO80Q9ULG1 1556 aaPredicted RBP12.43□□□□□ -0.42
TCF4-205ENST00000537578 TSHZ2Q9NRE2 1034 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms