RNA–Protein interactions for RNA: ENST00000532542.1

TRIM3-211, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 4,419 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-211ENST00000532542 MLECQ14165 292 aa14.88□□□□□ -0.03
TRIM3-211ENST00000532542 UHRF1BP1LA0JNW5 1464 aa14.88□□□□□ -0.03
TRIM3-211ENST00000532542 CC2D1BQ5T0F9 858 aaKnown RBP14.88□□□□□ -0.03
TRIM3-211ENST00000532542 SALL2Q9Y467 1007 aaPredicted RBP14.87□□□□□ -0.03
TRIM3-211ENST00000532542 DUOX2Q9NRD8 1548 aa14.87□□□□□ -0.03
TRIM3-211ENST00000532542 ERICH6Q7L0X2 663 aa14.86□□□□□ -0.03
TRIM3-211ENST00000532542 ERBINQ96RT1 1412 aa14.85□□□□□ -0.03
TRIM3-211ENST00000532542 LRRIQ1Q96JM4 1722 aa14.85□□□□□ -0.03
TRIM3-211ENST00000532542 SENP3Q9H4L4 574 aaPredicted RBP14.85□□□□□ -0.03
TRIM3-211ENST00000532542 PZPP20742 1482 aa14.85□□□□□ -0.03
TRIM3-211ENST00000532542 PLPPR3Q6T4P5 718 aa14.84□□□□□ -0.03
TRIM3-211ENST00000532542 ARHGEF5Q12774 1597 aa14.84□□□□□ -0.03
TRIM3-211ENST00000532542 NEFMP07197 916 aa14.84□□□□□ -0.03
TRIM3-211ENST00000532542 POGKQ9P215 609 aa14.84□□□□□ -0.03
TRIM3-211ENST00000532542 ADCY10Q96PN6 1610 aa14.84□□□□□ -0.03
TRIM3-211ENST00000532542 HDGFP51858 240 aaKnown RBP14.83□□□□□ -0.03
TRIM3-211ENST00000532542 ADGBQ8N7X0 1667 aa14.83□□□□□ -0.04
TRIM3-211ENST00000532542 KDM5BQ9UGL1 1544 aa14.83□□□□□ -0.04
TRIM3-211ENST00000532542 TRAPPC8Q9Y2L5 1435 aa14.83□□□□□ -0.04
TRIM3-211ENST00000532542 VGFO15240 615 aaPredicted RBP14.82□□□□□ -0.04
TRIM3-211ENST00000532542 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.82□□□□□ -0.04
TRIM3-211ENST00000532542 MBD5Q9P267 1494 aa14.82□□□□□ -0.04
TRIM3-211ENST00000532542 SUPT16HQ9Y5B9 1047 aaKnown RBP14.82□□□□□ -0.04
TRIM3-211ENST00000532542 RAPGEF3O95398 923 aa14.81□□□□□ -0.04
TRIM3-211ENST00000532542 DHX29Q7Z478 1369 aaKnown RBP14.81□□□□□ -0.04
TRIM3-211ENST00000532542 FAM135AQ9P2D6 1515 aa14.81□□□□□ -0.04
TRIM3-211ENST00000532542 NLRP13Q86W25 1043 aa14.81□□□□□ -0.04
TRIM3-211ENST00000532542 RTEL1-TNFRSF6BF6WH68 1400 aa14.81□□□□□ -0.04
TRIM3-211ENST00000532542 NBPF1Q3BBV0 1214 aa14.8□□□□□ -0.04
TRIM3-211ENST00000532542 MYBBP1AQ9BQG0 1328 aaKnown RBP14.79□□□□□ -0.04
TRIM3-211ENST00000532542 ERCC6L2Q5T890 1561 aa14.78□□□□□ -0.04
TRIM3-211ENST00000532542 TRHP20396 242 aaPredicted RBP14.78□□□□□ -0.04
TRIM3-211ENST00000532542 PANK3Q9H999 370 aa14.78□□□□□ -0.04
TRIM3-211ENST00000532542 CFAP53Q96M91 514 aa14.78□□□□□ -0.04
TRIM3-211ENST00000532542 KDM6BO15054 1643 aa14.77□□□□□ -0.04
TRIM3-211ENST00000532542 MYO5CQ9NQX4 1742 aa14.77□□□□□ -0.05
TRIM3-211ENST00000532542 PREX2Q70Z35 1606 aa14.76□□□□□ -0.05
TRIM3-211ENST00000532542 ZNF518AQ6AHZ1 1483 aa14.76□□□□□ -0.05
TRIM3-211ENST00000532542 IRX6P78412 446 aaPredicted RBP14.76□□□□□ -0.05
TRIM3-211ENST00000532542 TRAK1Q9UPV9 953 aa14.76□□□□□ -0.05
TRIM3-211ENST00000532542 DENND4BO75064 1496 aaPredicted RBP14.75□□□□□ -0.05
TRIM3-211ENST00000532542 SAMD9LQ8IVG5 1584 aa14.75□□□□□ -0.05
TRIM3-211ENST00000532542 STK26Q9P289 416 aa14.75□□□□□ -0.05
TRIM3-211ENST00000532542 SRPK2P78362 688 aaKnown RBP14.74□□□□□ -0.05
TRIM3-211ENST00000532542 CDC42BPAQ5VT25 1732 aa14.74□□□□□ -0.05
TRIM3-211ENST00000532542 CANXP27824 592 aaKnown RBP14.74□□□□□ -0.05
TRIM3-211ENST00000532542 C11orf95C9JLR9 678 aaPredicted RBP14.74□□□□□ -0.05
TRIM3-211ENST00000532542 NUTM2DQ5VT03 806 aaPredicted RBP14.74□□□□□ -0.05
TRIM3-211ENST00000532542 TTC37Q6PGP7 1564 aa14.74□□□□□ -0.05
TRIM3-211ENST00000532542 CLASP1Q7Z460 1538 aa14.73□□□□□ -0.05
TRIM3-211ENST00000532542 ARHGEF12Q9NZN5 1544 aa14.73□□□□□ -0.05
TRIM3-211ENST00000532542 SAFB2Q14151 953 aaKnown RBP eCLIP14.73□□□□□ -0.05
TRIM3-211ENST00000532542 ZCCHC11Q5TAX3 1644 aaKnown RBP14.73□□□□□ -0.05
TRIM3-211ENST00000532542 TEX14Q8IWB6 1497 aa14.72□□□□□ -0.05
TRIM3-211ENST00000532542 SENP3-EIF4A1A0A087X0R7 540 aa14.72□□□□□ -0.05
TRIM3-211ENST00000532542 CFAP70Q5T0N1 1121 aa14.72□□□□□ -0.05
TRIM3-211ENST00000532542 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.72□□□□□ -0.05
TRIM3-211ENST00000532542 RALGAPBQ86X10 1494 aa14.72□□□□□ -0.05
TRIM3-211ENST00000532542 MORC1Q86VD1 984 aa14.71□□□□□ -0.05
TRIM3-211ENST00000532542 SLC52A1Q9NWF4 448 aa14.71□□□□□ -0.05
TRIM3-211ENST00000532542 SHROOM2Q13796 1616 aa14.71□□□□□ -0.05
TRIM3-211ENST00000532542 CCDC136Q96JN2 1154 aa14.71□□□□□ -0.06
TRIM3-211ENST00000532542 RPGRIP1LQ68CZ1 1315 aa14.7□□□□□ -0.06
TRIM3-211ENST00000532542 CENPJQ9HC77 1338 aaPredicted RBP14.7□□□□□ -0.06
TRIM3-211ENST00000532542 ZBED9Q6R2W3 1325 aa14.7□□□□□ -0.06
TRIM3-211ENST00000532542 A2MP01023 1474 aa14.7□□□□□ -0.06
TRIM3-211ENST00000532542 TNNT2P45379 298 aaPredicted RBP14.67□□□□□ -0.06
TRIM3-211ENST00000532542 ATP7AQ04656 1500 aa14.67□□□□□ -0.06
TRIM3-211ENST00000532542 EVC2Q86UK5 1308 aa14.67□□□□□ -0.06
TRIM3-211ENST00000532542 ERICH6BQ5W0A0 696 aa14.67□□□□□ -0.06
TRIM3-211ENST00000532542 UHRF1BP1Q6BDS2 1440 aa14.67□□□□□ -0.06
TRIM3-211ENST00000532542 NUDCQ9Y266 331 aa14.66□□□□□ -0.06
TRIM3-211ENST00000532542 PRAG1Q86YV5 1406 aa14.66□□□□□ -0.06
TRIM3-211ENST00000532542 PPP4R2Q9NY27 417 aa14.66□□□□□ -0.06
TRIM3-211ENST00000532542 ABCC1P33527 1531 aa14.66□□□□□ -0.06
TRIM3-211ENST00000532542 BRD4O60885 1362 aaPredicted RBP14.66□□□□□ -0.06
TRIM3-211ENST00000532542 HDGFL2Q7Z4V5 671 aaPredicted RBP14.65□□□□□ -0.06
TRIM3-211ENST00000532542 TERF2IPQ9NYB0 399 aa14.64□□□□□ -0.07
TRIM3-211ENST00000532542 ARAP3Q8WWN8 1544 aa14.64□□□□□ -0.07
TRIM3-211ENST00000532542 PDE3BQ13370 1112 aa14.63□□□□□ -0.07
TRIM3-211ENST00000532542 MAST1Q9Y2H9 1570 aa14.63□□□□□ -0.07
TRIM3-211ENST00000532542 CROCC2H7BZ55 1655 aa14.63□□□□□ -0.07
TRIM3-211ENST00000532542 KDM5DQ9BY66 1539 aa14.63□□□□□ -0.07
TRIM3-211ENST00000532542 TMEM132EQ6IEE7 984 aa14.62□□□□□ -0.07
TRIM3-211ENST00000532542 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.61□□□□□ -0.07
TRIM3-211ENST00000532542 EID1Q9Y6B2 187 aa14.6□□□□□ -0.07
TRIM3-211ENST00000532542 CDC42BPBQ9Y5S2 1711 aa14.6□□□□□ -0.07
TRIM3-211ENST00000532542 PPP6R1Q9UPN7 881 aa14.59□□□□□ -0.07
TRIM3-211ENST00000532542 NEO1Q92859 1461 aa14.59□□□□□ -0.07
TRIM3-211ENST00000532542 PLXNC1O60486 1568 aa14.59□□□□□ -0.07
TRIM3-211ENST00000532542 CGNL1Q0VF96 1302 aa14.59□□□□□ -0.07
TRIM3-211ENST00000532542 POGZQ7Z3K3 1410 aa14.59□□□□□ -0.07
TRIM3-211ENST00000532542 SCAF11Q99590 1463 aaKnown RBP14.59□□□□□ -0.07
TRIM3-211ENST00000532542 EIF2AK4Q9P2K8 1649 aaKnown RBP14.58□□□□□ -0.07
TRIM3-211ENST00000532542 DAXXQ9UER7 740 aaPredicted RBP14.58□□□□□ -0.08
TRIM3-211ENST00000532542 ADGRF5Q8IZF2 1346 aa14.58□□□□□ -0.08
TRIM3-211ENST00000532542 MAPK8IP3Q9UPT6 1336 aa14.58□□□□□ -0.08
TRIM3-211ENST00000532542 PPM1GO15355 546 aaPredicted RBP14.58□□□□□ -0.08
TRIM3-211ENST00000532542 CCDC184Q52MB2 194 aa14.58□□□□□ -0.08
TRIM3-211ENST00000532542 CFAP74Q9C0B2 1584 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms