RNA–Protein interactions for RNA: ENST00000527317.2

AP001993.1-201, humanhuman

TSL 2 BASIC

Gene AP001993.1, Length 2,337 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001993.1-201ENST00000527317 CEP164Q9UPV0 1460 aa13.94□□□□□ -0.18
AP001993.1-201ENST00000527317 UBTFP17480 764 aaKnown RBP13.94□□□□□ -0.18
AP001993.1-201ENST00000527317 ATP2B3Q16720 1220 aa13.94□□□□□ -0.18
AP001993.1-201ENST00000527317 CARD10Q9BWT7 1032 aa13.94□□□□□ -0.18
AP001993.1-201ENST00000527317 SLKQ9H2G2 1235 aaPredicted RBP13.94□□□□□ -0.18
AP001993.1-201ENST00000527317 CCDC9Q9Y3X0 531 aaKnown RBP13.94□□□□□ -0.18
AP001993.1-201ENST00000527317 FAM161AQ3B820 660 aa13.93□□□□□ -0.18
AP001993.1-201ENST00000527317 TRAK2O60296 914 aa13.92□□□□□ -0.18
AP001993.1-201ENST00000527317 MCM4P33991 863 aa13.92□□□□□ -0.18
AP001993.1-201ENST00000527317 RRP1P56182 461 aaKnown RBP13.92□□□□□ -0.18
AP001993.1-201ENST00000527317 PHF14O94880 888 aa13.91□□□□□ -0.18
AP001993.1-201ENST00000527317 CCDC173Q0VFZ6 552 aa13.91□□□□□ -0.18
AP001993.1-201ENST00000527317 PPP1R9BQ96SB3 815 aa13.91□□□□□ -0.18
AP001993.1-201ENST00000527317 ABCC8Q09428 1581 aa13.91□□□□□ -0.18
AP001993.1-201ENST00000527317 ZNF500O60304 480 aaPredicted RBP13.91□□□□□ -0.18
AP001993.1-201ENST00000527317 BECN1Q14457 450 aa13.91□□□□□ -0.18
AP001993.1-201ENST00000527317 TRIM6-TRIM34B2RNG4 842 aa13.9□□□□□ -0.18
AP001993.1-201ENST00000527317 SASS6Q6UVJ0 657 aa13.9□□□□□ -0.18
AP001993.1-201ENST00000527317 TRIM34Q9BYJ4 488 aa13.9□□□□□ -0.18
AP001993.1-201ENST00000527317 IGSF3O75054 1194 aa13.9□□□□□ -0.18
AP001993.1-201ENST00000527317 CAPN2P17655 700 aa13.9□□□□□ -0.18
AP001993.1-201ENST00000527317 MCCP23508 829 aa13.9□□□□□ -0.18
AP001993.1-201ENST00000527317 ZNF771Q7L3S4 317 aaPredicted RBP13.89□□□□□ -0.19
AP001993.1-201ENST00000527317 PRKRIP1Q9H875 184 aaPredicted RBP13.89□□□□□ -0.19
AP001993.1-201ENST00000527317 TULP2O00295 520 aa13.89□□□□□ -0.19
AP001993.1-201ENST00000527317 RRBP1Q9P2E9 1410 aaKnown RBP13.88□□□□□ -0.19
AP001993.1-201ENST00000527317 EGFL6Q8IUX8 553 aa13.88□□□□□ -0.19
AP001993.1-201ENST00000527317 RAB3GAP2Q9H2M9 1393 aa13.88□□□□□ -0.19
AP001993.1-201ENST00000527317 GOLGA3Q08378 1498 aa13.87□□□□□ -0.19
AP001993.1-201ENST00000527317 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.87□□□□□ -0.19
AP001993.1-201ENST00000527317 NBPF1Q3BBV0 1214 aa13.87□□□□□ -0.19
AP001993.1-201ENST00000527317 LOC102724159A0A0B4J2E5 919 aa13.87□□□□□ -0.19
AP001993.1-201ENST00000527317 PWP2Q15269 919 aaKnown RBP13.87□□□□□ -0.19
AP001993.1-201ENST00000527317 EP400NLQ6ZTU2 488 aa13.87□□□□□ -0.19
AP001993.1-201ENST00000527317 ZNF710Q8N1W2 664 aa13.87□□□□□ -0.19
AP001993.1-201ENST00000527317 XPCQ01831 940 aaPredicted RBP13.86□□□□□ -0.19
AP001993.1-201ENST00000527317 GAS2L3Q86XJ1 694 aa13.86□□□□□ -0.19
AP001993.1-201ENST00000527317 VIRMAQ69YN4 1812 aaKnown RBP13.86□□□□□ -0.19
AP001993.1-201ENST00000527317 TIGD1Q96MW7 591 aa13.85□□□□□ -0.19
AP001993.1-201ENST00000527317 PLCD4Q9BRC7 762 aa13.85□□□□□ -0.19
AP001993.1-201ENST00000527317 CSPP1Q1MSJ5 1256 aa13.85□□□□□ -0.19
AP001993.1-201ENST00000527317 CNTLNQ9NXG0 1405 aa13.85□□□□□ -0.19
AP001993.1-201ENST00000527317 NCOA2Q15596 1464 aa13.84□□□□□ -0.19
AP001993.1-201ENST00000527317 KTN1Q86UP2 1357 aaKnown RBP13.84□□□□□ -0.19
AP001993.1-201ENST00000527317 MLECQ14165 292 aa13.84□□□□□ -0.19
AP001993.1-201ENST00000527317 NOL7Q9UMY1 257 aaKnown RBP13.84□□□□□ -0.19
AP001993.1-201ENST00000527317 CCDC66A2RUB6 948 aa13.83□□□□□ -0.2
AP001993.1-201ENST00000527317 PANK3Q9H999 370 aa13.83□□□□□ -0.2
AP001993.1-201ENST00000527317 HS1BP3Q53T59 392 aa13.82□□□□□ -0.2
AP001993.1-201ENST00000527317 TSPYL1Q9H0U9 437 aa13.82□□□□□ -0.2
AP001993.1-201ENST00000527317 USP19O94966 1318 aa13.82□□□□□ -0.2
AP001993.1-201ENST00000527317 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.82□□□□□ -0.2
AP001993.1-201ENST00000527317 SPDYE4A6NLX3 237 aa13.81□□□□□ -0.2
AP001993.1-201ENST00000527317 EFCC1Q9HA90 598 aa13.81□□□□□ -0.2
AP001993.1-201ENST00000527317 TRHP20396 242 aaPredicted RBP13.81□□□□□ -0.2
AP001993.1-201ENST00000527317 BANK1Q8NDB2 785 aa13.81□□□□□ -0.2
AP001993.1-201ENST00000527317 MYRIPQ8NFW9 859 aa13.81□□□□□ -0.2
AP001993.1-201ENST00000527317 ZNF592Q92610 1267 aa13.8□□□□□ -0.2
AP001993.1-201ENST00000527317 SIRT1Q96EB6 747 aa13.8□□□□□ -0.2
AP001993.1-201ENST00000527317 KIF3AQ9Y496 699 aa13.8□□□□□ -0.2
AP001993.1-201ENST00000527317 SOGA1O94964 1423 aa13.8□□□□□ -0.2
AP001993.1-201ENST00000527317 CLSTN1O94985 981 aa13.8□□□□□ -0.2
AP001993.1-201ENST00000527317 LMOD3Q0VAK6 560 aa13.8□□□□□ -0.2
AP001993.1-201ENST00000527317 CEP120Q8N960 986 aa13.8□□□□□ -0.2
AP001993.1-201ENST00000527317 CCDC88BA6NC98 1476 aa13.78□□□□□ -0.2
AP001993.1-201ENST00000527317 JARID2Q92833 1246 aaPredicted RBP13.78□□□□□ -0.2
AP001993.1-201ENST00000527317 KDM2BQ8NHM5 1336 aa13.78□□□□□ -0.2
AP001993.1-201ENST00000527317 FHAD1B1AJZ9 1412 aa13.78□□□□□ -0.2
AP001993.1-201ENST00000527317 EIF4G1Q04637 1599 aaKnown RBP13.77□□□□□ -0.2
AP001993.1-201ENST00000527317 IRF6O14896 467 aa13.77□□□□□ -0.21
AP001993.1-201ENST00000527317 CT47A1Q5JQC4 288 aaPredicted RBP13.77□□□□□ -0.21
AP001993.1-201ENST00000527317 NASPP49321 788 aaPredicted RBP13.76□□□□□ -0.21
AP001993.1-201ENST00000527317 GABPB1Q06547 395 aaPredicted RBP13.76□□□□□ -0.21
AP001993.1-201ENST00000527317 ERICH3Q5RHP9 1530 aa13.76□□□□□ -0.21
AP001993.1-201ENST00000527317 DDX11L8A8MPP1 907 aa13.76□□□□□ -0.21
AP001993.1-201ENST00000527317 NBPF20Q3BBV1 942 aa13.76□□□□□ -0.21
AP001993.1-201ENST00000527317 TSC1Q92574 1164 aa13.76□□□□□ -0.21
AP001993.1-201ENST00000527317 NINLQ9Y2I6 1382 aa13.76□□□□□ -0.21
AP001993.1-201ENST00000527317 GTF2F1P35269 517 aaKnown RBP eCLIP13.75□□□□□ -0.21
AP001993.1-201ENST00000527317 RCAN3Q9UKA8 241 aa13.75□□□□□ -0.21
AP001993.1-201ENST00000527317 MYOM3Q5VTT5 1437 aa13.74□□□□□ -0.21
AP001993.1-201ENST00000527317 SH3BP1Q9Y3L3 701 aa13.74□□□□□ -0.21
AP001993.1-201ENST00000527317 PRDM2Q13029 1718 aa13.74□□□□□ -0.21
AP001993.1-201ENST00000527317 SLFN14P0C7P3 912 aa13.74□□□□□ -0.21
AP001993.1-201ENST00000527317 FEZ2Q9UHY8 353 aaPredicted RBP13.74□□□□□ -0.21
AP001993.1-201ENST00000527317 ZKSCAN5Q9Y2L8 839 aa13.74□□□□□ -0.21
AP001993.1-201ENST00000527317 CFAP44Q96MT7 982 aa13.73□□□□□ -0.21
AP001993.1-201ENST00000527317 MYCBPQ99417 103 aaPredicted RBP13.73□□□□□ -0.21
AP001993.1-201ENST00000527317 CALCOCO1Q9P1Z2 691 aa13.73□□□□□ -0.21
AP001993.1-201ENST00000527317 BRPF1P55201 1214 aaPredicted RBP13.73□□□□□ -0.21
AP001993.1-201ENST00000527317 TPRNQ4KMQ1 711 aa13.73□□□□□ -0.21
AP001993.1-201ENST00000527317 CEP83Q9Y592 693 aa13.73□□□□□ -0.21
AP001993.1-201ENST00000527317 CCNB3Q8WWL7 1395 aa13.72□□□□□ -0.21
AP001993.1-201ENST00000527317 MCM5P33992 734 aa13.72□□□□□ -0.21
AP001993.1-201ENST00000527317 HSP90AB3PQ58FF7 597 aa13.72□□□□□ -0.21
AP001993.1-201ENST00000527317 PDCL2Q8N4E4 241 aa13.72□□□□□ -0.21
AP001993.1-201ENST00000527317 NLRP1Q9C000 1473 aa13.71□□□□□ -0.21
AP001993.1-201ENST00000527317 U2AF2P26368 475 aaKnown RBP eCLIP13.71□□□□□ -0.21
AP001993.1-201ENST00000527317 CENPQQ7L2Z9 268 aaPredicted RBP13.71□□□□□ -0.21
AP001993.1-201ENST00000527317 NCAPGQ9BPX3 1015 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms