RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 STAG3Q9UJ98 1225 aa8.88□□□□□ -0.99
TGFBR3-207ENST00000525962 PLCB2Q00722 1185 aa8.88□□□□□ -0.99
TGFBR3-207ENST00000525962 TIAM1Q13009 1591 aa8.88□□□□□ -0.99
TGFBR3-207ENST00000525962 PNNQ9H307 717 aaKnown RBP8.87□□□□□ -0.99
TGFBR3-207ENST00000525962 FOXD4L6Q3SYB3 417 aaPredicted RBP8.87□□□□□ -0.99
TGFBR3-207ENST00000525962 FOXD4L3Q6VB84 417 aaPredicted RBP8.87□□□□□ -0.99
TGFBR3-207ENST00000525962 TRAK1Q9UPV9 953 aa8.87□□□□□ -0.99
TGFBR3-207ENST00000525962 CENPQQ7L2Z9 268 aaPredicted RBP8.86□□□□□ -0.99
TGFBR3-207ENST00000525962 POGKQ9P215 609 aa8.86□□□□□ -0.99
TGFBR3-207ENST00000525962 DNTTIP2Q5QJE6 756 aaKnown RBP8.86□□□□□ -0.99
TGFBR3-207ENST00000525962 VSIG10Q8N0Z9 540 aa8.86□□□□□ -0.99
TGFBR3-207ENST00000525962 PDE3BQ13370 1112 aa8.86□□□□□ -0.99
TGFBR3-207ENST00000525962 NOL8Q76FK4 1167 aaKnown RBP8.86□□□□□ -0.99
TGFBR3-207ENST00000525962 USP35Q9P2H5 1018 aa8.86□□□□□ -0.99
TGFBR3-207ENST00000525962 FANCD2Q9BXW9 1451 aa8.85□□□□□ -0.99
TGFBR3-207ENST00000525962 HFM1A2PYH4 1435 aa8.85□□□□□ -0.99
TGFBR3-207ENST00000525962 ANKRD30AQ9BXX3 1397 aa8.85□□□□□ -0.99
TGFBR3-207ENST00000525962 CENPJQ9HC77 1338 aaPredicted RBP8.85□□□□□ -0.99
TGFBR3-207ENST00000525962 NESP48681 1621 aa8.85□□□□□ -0.99
TGFBR3-207ENST00000525962 PTMAP06454 111 aaKnown RBP8.85□□□□□ -0.99
TGFBR3-207ENST00000525962 HSCBQ8IWL3 235 aa8.85□□□□□ -0.99
TGFBR3-207ENST00000525962 GOLGA6L3A6NEY3 463 aa8.85□□□□□ -0.99
TGFBR3-207ENST00000525962 GGT6Q6P531 493 aa8.85□□□□□ -0.99
TGFBR3-207ENST00000525962 WDR62O43379 1518 aa8.84□□□□□ -0.99
TGFBR3-207ENST00000525962 SMC4Q9NTJ3 1288 aa8.84□□□□□ -0.99
TGFBR3-207ENST00000525962 ERICH3Q5RHP9 1530 aa8.84□□□□□ -0.99
TGFBR3-207ENST00000525962 TOP2BQ02880 1626 aa8.84□□□□□ -0.99
TGFBR3-207ENST00000525962 MS4A1P11836 297 aa8.84□□□□□ -0.99
TGFBR3-207ENST00000525962 CFAP53Q96M91 514 aa8.84□□□□□ -0.99
TGFBR3-207ENST00000525962 TAOK2Q9UL54 1235 aa8.84□□□□□ -0.99
TGFBR3-207ENST00000525962 SMG6Q86US8 1419 aaKnown RBP8.84□□□□□ -0.99
TGFBR3-207ENST00000525962 CASKIN1Q8WXD9 1431 aa8.84□□□□□ -0.99
TGFBR3-207ENST00000525962 MAPK8IP3Q9UPT6 1336 aa8.83□□□□□ -1
TGFBR3-207ENST00000525962 GOLGA6L22H0YM25 854 aa8.83□□□□□ -1
TGFBR3-207ENST00000525962 CDCA8Q53HL2 280 aa8.83□□□□□ -1
TGFBR3-207ENST00000525962 SRPK2P78362 688 aaKnown RBP8.83□□□□□ -1
TGFBR3-207ENST00000525962 MYH16Q9H6N6 1097 aa8.83□□□□□ -1
TGFBR3-207ENST00000525962 AMER1Q5JTC6 1135 aaPredicted RBP8.82□□□□□ -1
TGFBR3-207ENST00000525962 JPH4Q96JJ6 628 aa8.82□□□□□ -1
TGFBR3-207ENST00000525962 PCF11O94913 1555 aaKnown RBP8.81□□□□□ -1
TGFBR3-207ENST00000525962 KIF3BO15066 747 aa8.81□□□□□ -1
TGFBR3-207ENST00000525962 L1TD1Q5T7N2 865 aaKnown RBP8.81□□□□□ -1
TGFBR3-207ENST00000525962 TARBP1Q13395 1621 aaKnown RBP8.8□□□□□ -1
TGFBR3-207ENST00000525962 LNPKQ9C0E8 428 aa8.8□□□□□ -1
TGFBR3-207ENST00000525962 PPP2R1AP30153 589 aa8.8□□□□□ -1
TGFBR3-207ENST00000525962 MPNDQ8N594 471 aa8.8□□□□□ -1
TGFBR3-207ENST00000525962 RWDD1Q9H446 243 aaPredicted RBP8.8□□□□□ -1
TGFBR3-207ENST00000525962 NUTM2FA1L443 756 aa8.79□□□□□ -1
TGFBR3-207ENST00000525962 TMEM132EQ6IEE7 984 aa8.79□□□□□ -1
TGFBR3-207ENST00000525962 CCDC144AA2RUR9 1427 aa8.79□□□□□ -1
TGFBR3-207ENST00000525962 UBE2Q2Q8WVN8 375 aa8.79□□□□□ -1
TGFBR3-207ENST00000525962 TSR2Q969E8 191 aaKnown RBP8.79□□□□□ -1
TGFBR3-207ENST00000525962 CDK13Q14004 1512 aaKnown RBP8.79□□□□□ -1
TGFBR3-207ENST00000525962 NCOA1Q15788 1441 aa8.78□□□□□ -1
TGFBR3-207ENST00000525962 PRG4Q92954 1404 aaPredicted RBP8.78□□□□□ -1
TGFBR3-207ENST00000525962 ANKRD30BQ9BXX2 1392 aa8.78□□□□□ -1
TGFBR3-207ENST00000525962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.78□□□□□ -12e-8■■□□□ 11.6
TGFBR3-207ENST00000525962 BCL11BQ9C0K0 894 aaPredicted RBP8.78□□□□□ -1
TGFBR3-207ENST00000525962 BRD4O60885 1362 aaPredicted RBP8.77□□□□□ -1
TGFBR3-207ENST00000525962 CFAP70Q5T0N1 1121 aa8.77□□□□□ -1
TGFBR3-207ENST00000525962 ANKRD45Q5TZF3 282 aa8.77□□□□□ -1
TGFBR3-207ENST00000525962 TNNQ9UQP3 1299 aa8.77□□□□□ -1
TGFBR3-207ENST00000525962 C1orf115Q9H7X2 142 aa8.77□□□□□ -1.01
TGFBR3-207ENST00000525962 IGHDP01880 384 aa8.77□□□□□ -1.01
TGFBR3-207ENST00000525962 HSP90AA2PQ14568 343 aaPredicted RBP8.77□□□□□ -1.01
TGFBR3-207ENST00000525962 PDZRN3Q9UPQ7 1066 aa8.77□□□□□ -1.01
TGFBR3-207ENST00000525962 ANKRD50Q9ULJ7 1429 aa8.77□□□□□ -1.01
TGFBR3-207ENST00000525962 SEC24BO95487 1268 aa8.76□□□□□ -1.01
TGFBR3-207ENST00000525962 GAPVD1Q14C86 1478 aa8.76□□□□□ -1.01
TGFBR3-207ENST00000525962 MSNP26038 577 aaKnown RBP8.76□□□□□ -1.01
TGFBR3-207ENST00000525962 FYCO1Q9BQS8 1478 aa8.76□□□□□ -1.01
TGFBR3-207ENST00000525962 E9PSI1 815 aa8.75□□□□□ -1.01
TGFBR3-207ENST00000525962 C14orf37Q86TY3 774 aa8.75□□□□□ -1.01
TGFBR3-207ENST00000525962 TCP11L2Q8N4U5 519 aa8.75□□□□□ -1.01
TGFBR3-207ENST00000525962 PMFBP1Q8TBY8 1022 aa8.75□□□□□ -1.01
TGFBR3-207ENST00000525962 SLC12A5Q9H2X9 1139 aa8.75□□□□□ -1.01
TGFBR3-207ENST00000525962 MLECQ14165 292 aa8.75□□□□□ -1.01
TGFBR3-207ENST00000525962 PKNOX2Q96KN3 472 aa8.74□□□□□ -1.01
TGFBR3-207ENST00000525962 PANK2Q9BZ23 570 aa8.74□□□□□ -1.01
TGFBR3-207ENST00000525962 C22orf23Q9BZE7 217 aa8.74□□□□□ -1.01
TGFBR3-207ENST00000525962 GGNBP2Q9H3C7 697 aa8.74□□□□□ -1.01
TGFBR3-207ENST00000525962 MTHFSP49914 203 aa8.73□□□□□ -1.01
TGFBR3-207ENST00000525962 AFAP1Q8N556 730 aa8.73□□□□□ -1.01
TGFBR3-207ENST00000525962 SPINK5Q9NQ38 1064 aaPredicted RBP8.73□□□□□ -1.01
TGFBR3-207ENST00000525962 DDX49Q9Y6V7 483 aaKnown RBP8.73□□□□□ -1.01
TGFBR3-207ENST00000525962 ABCA5Q8WWZ7 1642 aa8.73□□□□□ -1.01
TGFBR3-207ENST00000525962 TRAK2O60296 914 aa8.73□□□□□ -1.01
TGFBR3-207ENST00000525962 RBM10P98175 930 aaKnown RBP8.73□□□□□ -1.01
TGFBR3-207ENST00000525962 SLC4A10Q6U841 1118 aa8.73□□□□□ -1.01
TGFBR3-207ENST00000525962 RSPH6AQ9H0K4 717 aa8.73□□□□□ -1.01
TGFBR3-207ENST00000525962 CGNL1Q0VF96 1302 aa8.72□□□□□ -1.01
TGFBR3-207ENST00000525962 HMOX1P09601 288 aa8.72□□□□□ -1.01
TGFBR3-207ENST00000525962 DUSP27Q5VZP5 1158 aa8.72□□□□□ -1.01
TGFBR3-207ENST00000525962 ZNF428Q96B54 188 aa8.72□□□□□ -1.01
TGFBR3-207ENST00000525962 FAM13BQ9NYF5 915 aa8.72□□□□□ -1.01
TGFBR3-207ENST00000525962 POLA1P09884 1462 aaPredicted RBP8.72□□□□□ -1.01
TGFBR3-207ENST00000525962 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.71□□□□□ -1.01
TGFBR3-207ENST00000525962 ZKSCAN2Q63HK3 967 aa8.71□□□□□ -1.01
TGFBR3-207ENST00000525962 DZIP1LQ8IYY4 767 aaKnown RBP8.71□□□□□ -1.02
TGFBR3-207ENST00000525962 RNF214Q8ND24 703 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms