RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 MSH5O43196 834 aa24.23■■□□□ 1.47
IKBKB-228ENST00000523517 PREX2Q70Z35 1606 aa24.22■■□□□ 1.47
IKBKB-228ENST00000523517 KTN1Q86UP2 1357 aaKnown RBP24.2■■□□□ 1.46
IKBKB-228ENST00000523517 RNF123Q5XPI4 1314 aa24.2■■□□□ 1.46
IKBKB-228ENST00000523517 RALBP1Q15311 655 aa24.18■■□□□ 1.46
IKBKB-228ENST00000523517 CDC42BPBQ9Y5S2 1711 aa24.18■■□□□ 1.46
IKBKB-228ENST00000523517 MYBBP1AQ9BQG0 1328 aaKnown RBP24.18■■□□□ 1.46
IKBKB-228ENST00000523517 CCDC144AA2RUR9 1427 aa24.18■■□□□ 1.46
IKBKB-228ENST00000523517 PRAG1Q86YV5 1406 aa24.17■■□□□ 1.46
IKBKB-228ENST00000523517 BRD4O60885 1362 aaPredicted RBP24.17■■□□□ 1.46
IKBKB-228ENST00000523517 LRPPRCP42704 1394 aaKnown RBP24.15■■□□□ 1.46
IKBKB-228ENST00000523517 SYCP2Q9BX26 1530 aa24.15■■□□□ 1.46
IKBKB-228ENST00000523517 MAST1Q9Y2H9 1570 aa24.13■■□□□ 1.45
IKBKB-228ENST00000523517 PLA2R1Q13018 1463 aa24.13■■□□□ 1.45
IKBKB-228ENST00000523517 ARHGAP5Q13017 1502 aa24.12■■□□□ 1.45
IKBKB-228ENST00000523517 RGL3Q3MIN7 710 aa24.1■■□□□ 1.45
IKBKB-228ENST00000523517 UNC13BO14795 1591 aa24.1■■□□□ 1.45
IKBKB-228ENST00000523517 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.1■■□□□ 1.452e-6■■□□□ 12.3
IKBKB-228ENST00000523517 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.1■■□□□ 1.45
IKBKB-228ENST00000523517 TTC37Q6PGP7 1564 aa24.09■■□□□ 1.45
IKBKB-228ENST00000523517 GPRASP1Q5JY77 1395 aa24.09■■□□□ 1.45
IKBKB-228ENST00000523517 SENP3-EIF4A1A0A087X0R7 540 aa24.09■■□□□ 1.45
IKBKB-228ENST00000523517 E9PCH4 1651 aa24.09■■□□□ 1.45
IKBKB-228ENST00000523517 TRPM1Q7Z4N2 1603 aa24.09■■□□□ 1.45
IKBKB-228ENST00000523517 NBPF1Q3BBV0 1214 aa24.08■■□□□ 1.45
IKBKB-228ENST00000523517 A2MP01023 1474 aa24.07■■□□□ 1.44
IKBKB-228ENST00000523517 PLEKHH2Q8IVE3 1493 aa24.07■■□□□ 1.44
IKBKB-228ENST00000523517 PARD3Q8TEW0 1356 aa24.04■■□□□ 1.44
IKBKB-228ENST00000523517 NLRP13Q86W25 1043 aa24.04■■□□□ 1.44
IKBKB-228ENST00000523517 PLXNC1O60486 1568 aa24.03■■□□□ 1.44
IKBKB-228ENST00000523517 SHROOM2Q13796 1616 aa24.03■■□□□ 1.44
IKBKB-228ENST00000523517 CCDC136Q96JN2 1154 aa24.02■■□□□ 1.44
IKBKB-228ENST00000523517 PER1O15534 1290 aaPredicted RBP24.02■■□□□ 1.44
IKBKB-228ENST00000523517 ABCC2Q92887 1545 aa24.02■■□□□ 1.44
IKBKB-228ENST00000523517 IQGAP3Q86VI3 1631 aa24.01■■□□□ 1.43
IKBKB-228ENST00000523517 DUOX2Q9NRD8 1548 aa24■■□□□ 1.43
IKBKB-228ENST00000523517 TESK2Q96S53 571 aa24■■□□□ 1.43
IKBKB-228ENST00000523517 CHD1O14646 1710 aa23.99■■□□□ 1.43
IKBKB-228ENST00000523517 ERICH6Q7L0X2 663 aa23.99■■□□□ 1.43
IKBKB-228ENST00000523517 ATP10AO60312 1499 aa23.99■■□□□ 1.43
IKBKB-228ENST00000523517 COL17A1Q9UMD9 1497 aaPredicted RBP23.99■■□□□ 1.43
IKBKB-228ENST00000523517 PRDM15P57071 1507 aaPredicted RBP23.98■■□□□ 1.43
IKBKB-228ENST00000523517 LAMC1P11047 1609 aa23.98■■□□□ 1.43
IKBKB-228ENST00000523517 WASHC2CQ9Y4E1 1318 aa23.97■■□□□ 1.43
IKBKB-228ENST00000523517 ERBINQ96RT1 1412 aa23.97■■□□□ 1.43
IKBKB-228ENST00000523517 DISP3Q9P2K9 1392 aa23.96■■□□□ 1.43
IKBKB-228ENST00000523517 MAGI2Q86UL8 1455 aa23.96■■□□□ 1.43
IKBKB-228ENST00000523517 MYO5CQ9NQX4 1742 aa23.95■■□□□ 1.43
IKBKB-228ENST00000523517 ERCC6L2Q5T890 1561 aa23.95■■□□□ 1.42
IKBKB-228ENST00000523517 PLCH2O75038 1416 aa23.95■■□□□ 1.42
IKBKB-228ENST00000523517 EIF2AK4Q9P2K8 1649 aaKnown RBP23.93■■□□□ 1.42
IKBKB-228ENST00000523517 EFCAB2Q5VUJ9 269 aa23.93■■□□□ 1.42
IKBKB-228ENST00000523517 PDE3BQ13370 1112 aa23.92■■□□□ 1.42
IKBKB-228ENST00000523517 RRP1P56182 461 aaKnown RBP23.92■■□□□ 1.42
IKBKB-228ENST00000523517 TMF1P82094 1093 aa23.91■■□□□ 1.42
IKBKB-228ENST00000523517 PANK3Q9H999 370 aa23.91■■□□□ 1.42
IKBKB-228ENST00000523517 CC2D1BQ5T0F9 858 aaKnown RBP23.89■■□□□ 1.42
IKBKB-228ENST00000523517 RCAN3Q9UKA8 241 aa23.89■■□□□ 1.42
IKBKB-228ENST00000523517 SALL2Q9Y467 1007 aaPredicted RBP23.88■■□□□ 1.41
IKBKB-228ENST00000523517 INSRP06213 1382 aa23.87■■□□□ 1.41
IKBKB-228ENST00000523517 TRAPPC8Q9Y2L5 1435 aa23.86■■□□□ 1.41
IKBKB-228ENST00000523517 ABCC1P33527 1531 aa23.84■■□□□ 1.41
IKBKB-228ENST00000523517 UHRF1BP1LA0JNW5 1464 aa23.83■■□□□ 1.41
IKBKB-228ENST00000523517 ZMYM4Q5VZL5 1548 aa23.82■■□□□ 1.4
IKBKB-228ENST00000523517 EXOC6Q8TAG9 804 aa23.82■■□□□ 1.4
IKBKB-228ENST00000523517 BLMP54132 1417 aaPredicted RBP23.81■■□□□ 1.4
IKBKB-228ENST00000523517 ZCCHC11Q5TAX3 1644 aaKnown RBP23.81■■□□□ 1.4
IKBKB-228ENST00000523517 SPAG9O60271 1321 aaKnown RBP23.8■■□□□ 1.4
IKBKB-228ENST00000523517 RNF17Q9BXT8 1623 aaKnown RBP23.8■■□□□ 1.4
IKBKB-228ENST00000523517 CDCA7LQ96GN5 454 aa23.8■■□□□ 1.4
IKBKB-228ENST00000523517 RTEL1-TNFRSF6BF6WH68 1400 aa23.78■■□□□ 1.4
IKBKB-228ENST00000523517 NOP58Q9Y2X3 529 aaKnown RBP23.77■■□□□ 1.4
IKBKB-228ENST00000523517 AFAP1Q8N556 730 aa23.75■■□□□ 1.39
IKBKB-228ENST00000523517 WDR7Q9Y4E6 1490 aa23.75■■□□□ 1.39
IKBKB-228ENST00000523517 STAC3Q96MF2 364 aa23.74■■□□□ 1.39
IKBKB-228ENST00000523517 MADDQ8WXG6 1647 aa23.74■■□□□ 1.39
IKBKB-228ENST00000523517 TRPM2O94759 1503 aa23.73■■□□□ 1.39
IKBKB-228ENST00000523517 PTPRTO14522 1441 aa23.73■■□□□ 1.39
IKBKB-228ENST00000523517 CLASP1Q7Z460 1538 aa23.73■■□□□ 1.39
IKBKB-228ENST00000523517 ANP32AP39687 249 aaKnown RBP23.72■■□□□ 1.39
IKBKB-228ENST00000523517 KNSTRNQ9Y448 316 aa23.71■■□□□ 1.39
IKBKB-228ENST00000523517 SCAPERQ9BY12 1400 aa23.7■■□□□ 1.39
IKBKB-228ENST00000523517 ZFYVE16Q7Z3T8 1539 aa23.7■■□□□ 1.39
IKBKB-228ENST00000523517 ARAP3Q8WWN8 1544 aa23.7■■□□□ 1.39
IKBKB-228ENST00000523517 CDCA8Q53HL2 280 aa23.7■■□□□ 1.38
IKBKB-228ENST00000523517 SCAF11Q99590 1463 aaKnown RBP23.69■■□□□ 1.38
IKBKB-228ENST00000523517 IPO9Q96P70 1041 aaKnown RBP23.69■■□□□ 1.38
IKBKB-228ENST00000523517 ADAMTS8Q9UP79 889 aa23.69■■□□□ 1.38
IKBKB-228ENST00000523517 TCERG1O14776 1098 aaKnown RBP23.68■■□□□ 1.38
IKBKB-228ENST00000523517 PAK3O75914 559 aaPredicted RBP23.68■■□□□ 1.38
IKBKB-228ENST00000523517 PPP2R1AP30153 589 aa23.68■■□□□ 1.38
IKBKB-228ENST00000523517 IQGAP1P46940 1657 aa23.68■■□□□ 1.38
IKBKB-228ENST00000523517 AMER1Q5JTC6 1135 aaPredicted RBP23.67■■□□□ 1.38
IKBKB-228ENST00000523517 MYT1LQ9UL68 1186 aa23.67■■□□□ 1.38
IKBKB-228ENST00000523517 CLTCL1P53675 1640 aa23.64■■□□□ 1.38
IKBKB-228ENST00000523517 PLIN1O60240 522 aa23.64■■□□□ 1.38
IKBKB-228ENST00000523517 KANK1Q14678 1352 aa23.64■■□□□ 1.38
IKBKB-228ENST00000523517 SPHKAPQ2M3C7 1700 aa23.63■■□□□ 1.37
IKBKB-228ENST00000523517 DEPDC5O75140 1603 aa23.63■■□□□ 1.37
IKBKB-228ENST00000523517 WDR43Q15061 677 aaKnown RBP eCLIP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms