RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-225ENST00000523288 LMOD2Q6P5Q4 547 aa4.94□□□□□ -1.62
FAM49B-225ENST00000523288 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.94□□□□□ -1.62
FAM49B-225ENST00000523288 CCNB3Q8WWL7 1395 aa4.94□□□□□ -1.62
FAM49B-225ENST00000523288 PTMSP20962 102 aa4.94□□□□□ -1.62
FAM49B-225ENST00000523288 ROCK2O75116 1388 aaKnown RBP4.94□□□□□ -1.62
FAM49B-225ENST00000523288 NCOA1Q15788 1441 aa4.94□□□□□ -1.62
FAM49B-225ENST00000523288 CLASP1Q7Z460 1538 aa4.94□□□□□ -1.62
FAM49B-225ENST00000523288 PLEKHD1A6NEE1 506 aa4.94□□□□□ -1.62
FAM49B-225ENST00000523288 MRE11P49959 708 aa4.94□□□□□ -1.62
FAM49B-225ENST00000523288 DYNC1I1O14576 645 aa4.94□□□□□ -1.62
FAM49B-225ENST00000523288 CCDC94Q9BW85 323 aaPredicted RBP4.94□□□□□ -1.62
FAM49B-225ENST00000523288 NINLQ9Y2I6 1382 aa4.93□□□□□ -1.62
FAM49B-225ENST00000523288 CEP120Q8N960 986 aa4.93□□□□□ -1.62
FAM49B-225ENST00000523288 SAMD1Q6SPF0 538 aaPredicted RBP4.93□□□□□ -1.62
FAM49B-225ENST00000523288 TSPYL1Q9H0U9 437 aa4.93□□□□□ -1.62
FAM49B-225ENST00000523288 AQRO60306 1485 aaKnown RBP eCLIP4.93□□□□□ -1.629e-8■■■■■ 31.5
FAM49B-225ENST00000523288 PPP4R3BQ5MIZ7 849 aa4.93□□□□□ -1.62
FAM49B-225ENST00000523288 AKNAQ7Z591 1439 aa4.93□□□□□ -1.62
FAM49B-225ENST00000523288 CLGNO14967 610 aa4.92□□□□□ -1.62
FAM49B-225ENST00000523288 RAB3GAP2Q9H2M9 1393 aa4.92□□□□□ -1.62
FAM49B-225ENST00000523288 RGS3P49796 1198 aa4.92□□□□□ -1.62
FAM49B-225ENST00000523288 B4GALNT3Q6L9W6 998 aa4.92□□□□□ -1.62
FAM49B-225ENST00000523288 ZNF622Q969S3 477 aaKnown RBP eCLIP4.92□□□□□ -1.62
FAM49B-225ENST00000523288 CHMP4AQ9BY43 222 aa4.92□□□□□ -1.62
FAM49B-225ENST00000523288 RAD50Q92878 1312 aa4.92□□□□□ -1.62
FAM49B-225ENST00000523288 PTPN23Q9H3S7 1636 aa4.92□□□□□ -1.62
FAM49B-225ENST00000523288 TNNT2P45379 298 aaPredicted RBP4.92□□□□□ -1.62
FAM49B-225ENST00000523288 MCM5P33992 734 aa4.92□□□□□ -1.62
FAM49B-225ENST00000523288 GRIPAP1Q4V328 841 aa4.92□□□□□ -1.62
FAM49B-225ENST00000523288 PPP1R9BQ96SB3 815 aa4.91□□□□□ -1.62
FAM49B-225ENST00000523288 NLRP1Q9C000 1473 aa4.91□□□□□ -1.62
FAM49B-225ENST00000523288 KDM2AQ9Y2K7 1162 aa4.91□□□□□ -1.62
FAM49B-225ENST00000523288 PBRM1Q86U86 1689 aa4.91□□□□□ -1.62
FAM49B-225ENST00000523288 ZSCAN20P17040 1043 aaPredicted RBP4.9□□□□□ -1.62
FAM49B-225ENST00000523288 HNRNPUQ00839 825 aaKnown RBP eCLIP4.9□□□□□ -1.62
FAM49B-225ENST00000523288 POLA1P09884 1462 aaPredicted RBP4.9□□□□□ -1.62
FAM49B-225ENST00000523288 LAMC1P11047 1609 aa4.9□□□□□ -1.62
FAM49B-225ENST00000523288 RUSC2Q8N2Y8 1516 aa4.9□□□□□ -1.62
FAM49B-225ENST00000523288 GAPVD1Q14C86 1478 aa4.9□□□□□ -1.62
FAM49B-225ENST00000523288 LRPPRCP42704 1394 aaKnown RBP4.9□□□□□ -1.62
FAM49B-225ENST00000523288 ESPNB1AK53 854 aa4.9□□□□□ -1.62
FAM49B-225ENST00000523288 ZNF500O60304 480 aaPredicted RBP4.9□□□□□ -1.62
FAM49B-225ENST00000523288 DDX10Q13206 875 aaKnown RBP4.9□□□□□ -1.62
FAM49B-225ENST00000523288 CREBRFQ8IUR6 639 aa4.9□□□□□ -1.62
FAM49B-225ENST00000523288 DNAJC2Q99543 621 aaKnown RBP4.9□□□□□ -1.62
FAM49B-225ENST00000523288 GEMIN8Q9NWZ8 242 aaKnown RBP4.9□□□□□ -1.62
FAM49B-225ENST00000523288 RIPK4P57078 832 aa4.9□□□□□ -1.63
FAM49B-225ENST00000523288 PAXIP1Q6ZW49 1069 aaPredicted RBP4.9□□□□□ -1.63
FAM49B-225ENST00000523288 ZFP91Q96JP5 570 aaPredicted RBP4.9□□□□□ -1.63
FAM49B-225ENST00000523288 SPATA31E1Q6ZUB1 1445 aa4.9□□□□□ -1.63
FAM49B-225ENST00000523288 XRCC6P12956 609 aaKnown RBP eCLIP4.9□□□□□ -1.63
FAM49B-225ENST00000523288 CSPP1Q1MSJ5 1256 aa4.9□□□□□ -1.63
FAM49B-225ENST00000523288 PLXNC1O60486 1568 aa4.9□□□□□ -1.63
FAM49B-225ENST00000523288 KDM2BQ8NHM5 1336 aa4.89□□□□□ -1.63
FAM49B-225ENST00000523288 HMGB1P09429 215 aaKnown RBP4.89□□□□□ -1.63
FAM49B-225ENST00000523288 GTF2F1P35269 517 aaKnown RBP eCLIP4.89□□□□□ -1.63
FAM49B-225ENST00000523288 RGS22Q8NE09 1264 aa4.89□□□□□ -1.63
FAM49B-225ENST00000523288 ARHGEF11O15085 1522 aa4.89□□□□□ -1.63
FAM49B-225ENST00000523288 MCCP23508 829 aa4.89□□□□□ -1.63
FAM49B-225ENST00000523288 AMER1Q5JTC6 1135 aaPredicted RBP4.89□□□□□ -1.63
FAM49B-225ENST00000523288 MTUS2Q5JR59 1369 aa4.89□□□□□ -1.63
FAM49B-225ENST00000523288 HSP90AB1P08238 724 aaKnown RBP4.89□□□□□ -1.63
FAM49B-225ENST00000523288 CCDC173Q0VFZ6 552 aa4.89□□□□□ -1.63
FAM49B-225ENST00000523288 MBD5Q9P267 1494 aa4.89□□□□□ -1.63
FAM49B-225ENST00000523288 NCOA3Q9Y6Q9 1424 aa4.89□□□□□ -1.63
FAM49B-225ENST00000523288 IRX3P78415 501 aaPredicted RBP4.89□□□□□ -1.63
FAM49B-225ENST00000523288 KIF14Q15058 1648 aa4.88□□□□□ -1.63
FAM49B-225ENST00000523288 PDE3BQ13370 1112 aa4.88□□□□□ -1.63
FAM49B-225ENST00000523288 MIA2Q96PC5 1412 aa4.88□□□□□ -1.63
FAM49B-225ENST00000523288 UACAQ9BZF9 1416 aa4.88□□□□□ -1.63
FAM49B-225ENST00000523288 CHMP4BQ9H444 224 aaKnown RBP4.88□□□□□ -1.63
FAM49B-225ENST00000523288 RBM25P49756 843 aaKnown RBP4.88□□□□□ -1.63
FAM49B-225ENST00000523288 PSEN1P49768 467 aa4.87□□□□□ -1.63
FAM49B-225ENST00000523288 SECISBP2LQ93073 1101 aaKnown RBP4.87□□□□□ -1.63
FAM49B-225ENST00000523288 ZNF830Q96NB3 372 aaPredicted RBP4.87□□□□□ -1.63
FAM49B-225ENST00000523288 LRRC9Q6ZRR7 1453 aa4.87□□□□□ -1.63
FAM49B-225ENST00000523288 ANTXR1Q9H6X2 564 aa4.87□□□□□ -1.63
FAM49B-225ENST00000523288 RAPGEF2Q9Y4G8 1499 aa4.87□□□□□ -1.63
FAM49B-225ENST00000523288 FAM161AQ3B820 660 aa4.87□□□□□ -1.63
FAM49B-225ENST00000523288 EIF3AQ14152 1382 aaKnown RBP4.87□□□□□ -1.63
FAM49B-225ENST00000523288 DNMBPQ6XZF7 1577 aa4.87□□□□□ -1.63
FAM49B-225ENST00000523288 HFM1A2PYH4 1435 aa4.87□□□□□ -1.63
FAM49B-225ENST00000523288 TULP2O00295 520 aa4.87□□□□□ -1.63
FAM49B-225ENST00000523288 NPHP1O15259 732 aa4.87□□□□□ -1.63
FAM49B-225ENST00000523288 EFCC1Q9HA90 598 aa4.87□□□□□ -1.63
FAM49B-225ENST00000523288 KDM5CP41229 1560 aa4.86□□□□□ -1.63
FAM49B-225ENST00000523288 TCOF1Q13428 1488 aaKnown RBP4.86□□□□□ -1.63
FAM49B-225ENST00000523288 PTMAP06454 111 aaKnown RBP4.86□□□□□ -1.63
FAM49B-225ENST00000523288 RRP1P56182 461 aaKnown RBP4.86□□□□□ -1.63
FAM49B-225ENST00000523288 RGL3Q3MIN7 710 aa4.86□□□□□ -1.63
FAM49B-225ENST00000523288 FRAT2O75474 233 aaPredicted RBP4.86□□□□□ -1.63
FAM49B-225ENST00000523288 ZSCAN30Q86W11 494 aa4.86□□□□□ -1.63
FAM49B-225ENST00000523288 GABPB1Q06547 395 aaPredicted RBP4.86□□□□□ -1.63
FAM49B-225ENST00000523288 SYCP1Q15431 976 aa4.86□□□□□ -1.63
FAM49B-225ENST00000523288 KIAA1211Q6ZU35 1233 aa4.86□□□□□ -1.63
FAM49B-225ENST00000523288 TMC1Q8TDI8 760 aa4.86□□□□□ -1.63
FAM49B-225ENST00000523288 SASS6Q6UVJ0 657 aa4.85□□□□□ -1.63
FAM49B-225ENST00000523288 CFDP1Q9UEE9 299 aaPredicted RBP4.85□□□□□ -1.63
FAM49B-225ENST00000523288 SPENQ96T58 3664 aaKnown RBP4.85□□□□□ -1.63
FAM49B-225ENST00000523288 CUX1P39880 1505 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms