RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 PREX2Q70Z35 1606 aa15.56■□□□□ 0.08
SNX25-205ENST00000512853 ZMYM4Q5VZL5 1548 aa15.56■□□□□ 0.08
SNX25-205ENST00000512853 FAM135AQ9P2D6 1515 aa15.56■□□□□ 0.08
SNX25-205ENST00000512853 UNC13BO14795 1591 aa15.55■□□□□ 0.08
SNX25-205ENST00000512853 PARD3Q8TEW0 1356 aa15.54■□□□□ 0.08
SNX25-205ENST00000512853 SAMD9LQ8IVG5 1584 aa15.54■□□□□ 0.08
SNX25-205ENST00000512853 INSRP06213 1382 aa15.54■□□□□ 0.08
SNX25-205ENST00000512853 CCDC141Q6ZP82 1450 aa15.54■□□□□ 0.08
SNX25-205ENST00000512853 PRAG1Q86YV5 1406 aa15.54■□□□□ 0.08
SNX25-205ENST00000512853 MAST1Q9Y2H9 1570 aa15.54■□□□□ 0.08
SNX25-205ENST00000512853 ST20-MTHFSA0A0A6YYL1 179 aa15.53■□□□□ 0.08
SNX25-205ENST00000512853 PLEKHD1A6NEE1 506 aa15.53■□□□□ 0.08
SNX25-205ENST00000512853 CDC42BPBQ9Y5S2 1711 aa15.52■□□□□ 0.08
SNX25-205ENST00000512853 GPRASP1Q5JY77 1395 aa15.52■□□□□ 0.08
SNX25-205ENST00000512853 CHMP7Q8WUX9 453 aaPredicted RBP15.52■□□□□ 0.07
SNX25-205ENST00000512853 COL17A1Q9UMD9 1497 aaPredicted RBP15.52■□□□□ 0.07
SNX25-205ENST00000512853 RRP1P56182 461 aaKnown RBP15.51■□□□□ 0.07
SNX25-205ENST00000512853 JPH4Q96JJ6 628 aa15.51■□□□□ 0.07
SNX25-205ENST00000512853 PRDM15P57071 1507 aaPredicted RBP15.51■□□□□ 0.07
SNX25-205ENST00000512853 PAK3O75914 559 aaPredicted RBP15.51■□□□□ 0.07
SNX25-205ENST00000512853 ANP32AP39687 249 aaKnown RBP15.51■□□□□ 0.07
SNX25-205ENST00000512853 CNGB1Q14028 1251 aaPredicted RBP15.51■□□□□ 0.07
SNX25-205ENST00000512853 EIF2AK4Q9P2K8 1649 aaKnown RBP15.5■□□□□ 0.07
SNX25-205ENST00000512853 IPO9Q96P70 1041 aaKnown RBP15.5■□□□□ 0.07
SNX25-205ENST00000512853 MYO5CQ9NQX4 1742 aa15.49■□□□□ 0.07
SNX25-205ENST00000512853 TSPY4P0CV99 314 aa15.49■□□□□ 0.07
SNX25-205ENST00000512853 TSPY10P0CW01 314 aa15.49■□□□□ 0.07
SNX25-205ENST00000512853 DEKP35659 375 aaKnown RBP15.49■□□□□ 0.07
SNX25-205ENST00000512853 PDE3BQ13370 1112 aa15.49■□□□□ 0.07
SNX25-205ENST00000512853 NLRP13Q86W25 1043 aa15.49■□□□□ 0.07
SNX25-205ENST00000512853 IQGAP3Q86VI3 1631 aa15.48■□□□□ 0.07
SNX25-205ENST00000512853 DCAF11Q8TEB1 546 aa15.48■□□□□ 0.07
SNX25-205ENST00000512853 PLXNC1O60486 1568 aa15.47■□□□□ 0.07
SNX25-205ENST00000512853 BLMP54132 1417 aaPredicted RBP15.47■□□□□ 0.07
SNX25-205ENST00000512853 A2MP01023 1474 aa15.47■□□□□ 0.07
SNX25-205ENST00000512853 RNF17Q9BXT8 1623 aaKnown RBP15.47■□□□□ 0.07
SNX25-205ENST00000512853 CCDC144AA2RUR9 1427 aa15.46■□□□□ 0.07
SNX25-205ENST00000512853 KDM2AQ9Y2K7 1162 aa15.46■□□□□ 0.07
SNX25-205ENST00000512853 PLA2R1Q13018 1463 aa15.45■□□□□ 0.06
SNX25-205ENST00000512853 PLEKHH2Q8IVE3 1493 aa15.45■□□□□ 0.06
SNX25-205ENST00000512853 RCAN3Q9UKA8 241 aa15.45■□□□□ 0.06
SNX25-205ENST00000512853 WASHC2CQ9Y4E1 1318 aa15.44■□□□□ 0.06
SNX25-205ENST00000512853 TCERG1O14776 1098 aaKnown RBP15.44■□□□□ 0.06
SNX25-205ENST00000512853 ERCC6Q03468 1493 aa15.44■□□□□ 0.06
SNX25-205ENST00000512853 RSPH4AQ5TD94 716 aa15.43■□□□□ 0.06
SNX25-205ENST00000512853 SYCP2Q9BX26 1530 aa15.43■□□□□ 0.06
SNX25-205ENST00000512853 PER1O15534 1290 aaPredicted RBP15.43■□□□□ 0.06
SNX25-205ENST00000512853 HNRNPMP52272 730 aaKnown RBP eCLIP15.43■□□□□ 0.06
SNX25-205ENST00000512853 EXOC6Q8TAG9 804 aa15.43■□□□□ 0.06
SNX25-205ENST00000512853 MAGI2Q86UL8 1455 aa15.42■□□□□ 0.06
SNX25-205ENST00000512853 ATP10AO60312 1499 aa15.42■□□□□ 0.06
SNX25-205ENST00000512853 SENP3-EIF4A1A0A087X0R7 540 aa15.41■□□□□ 0.06
SNX25-205ENST00000512853 ZBTB47Q9UFB7 747 aaPredicted RBP15.41■□□□□ 0.06
SNX25-205ENST00000512853 TTC37Q6PGP7 1564 aa15.4■□□□□ 0.06
SNX25-205ENST00000512853 MS4A1P11836 297 aa15.4■□□□□ 0.06
SNX25-205ENST00000512853 ERBINQ96RT1 1412 aa15.4■□□□□ 0.06
SNX25-205ENST00000512853 DISP3Q9P2K9 1392 aa15.39■□□□□ 0.05
SNX25-205ENST00000512853 NBR1Q14596 966 aa15.38■□□□□ 0.05
SNX25-205ENST00000512853 TESK2Q96S53 571 aa15.38■□□□□ 0.05
SNX25-205ENST00000512853 FBLN2P98095 1184 aa15.37■□□□□ 0.05
SNX25-205ENST00000512853 DUOX2Q9NRD8 1548 aa15.37■□□□□ 0.05
SNX25-205ENST00000512853 IQGAP1P46940 1657 aa15.36■□□□□ 0.05
SNX25-205ENST00000512853 ARHGAP5Q13017 1502 aa15.36■□□□□ 0.05
SNX25-205ENST00000512853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.36■□□□□ 0.05
SNX25-205ENST00000512853 NBPF1Q3BBV0 1214 aa15.35■□□□□ 0.05
SNX25-205ENST00000512853 PDE4AP27815 886 aa15.34■□□□□ 0.05
SNX25-205ENST00000512853 BACH2Q9BYV9 841 aa15.34■□□□□ 0.05
SNX25-205ENST00000512853 MADDQ8WXG6 1647 aa15.34■□□□□ 0.05
SNX25-205ENST00000512853 CLASP1Q7Z460 1538 aa15.33■□□□□ 0.05
SNX25-205ENST00000512853 SHROOM2Q13796 1616 aa15.33■□□□□ 0.04
SNX25-205ENST00000512853 RTL5Q5HYW3 569 aaPredicted RBP15.33■□□□□ 0.04
SNX25-205ENST00000512853 CDCA7LQ96GN5 454 aa15.32■□□□□ 0.04
SNX25-205ENST00000512853 SYNMO15061 1565 aa15.31■□□□□ 0.04
SNX25-205ENST00000512853 SPHKAPQ2M3C7 1700 aa15.31■□□□□ 0.04
SNX25-205ENST00000512853 WDR7Q9Y4E6 1490 aa15.3■□□□□ 0.04
SNX25-205ENST00000512853 TMF1P82094 1093 aa15.3■□□□□ 0.04
SNX25-205ENST00000512853 PANK3Q9H999 370 aa15.3■□□□□ 0.04
SNX25-205ENST00000512853 SALL2Q9Y467 1007 aaPredicted RBP15.29■□□□□ 0.04
SNX25-205ENST00000512853 RGL3Q3MIN7 710 aa15.29■□□□□ 0.04
SNX25-205ENST00000512853 CC2D1BQ5T0F9 858 aaKnown RBP15.28■□□□□ 0.04
SNX25-205ENST00000512853 CEP152O94986 1710 aa15.28■□□□□ 0.04
SNX25-205ENST00000512853 ABCC2Q92887 1545 aa15.28■□□□□ 0.04
SNX25-205ENST00000512853 CRBNQ96SW2 442 aa15.27■□□□□ 0.04
SNX25-205ENST00000512853 CHD1O14646 1710 aa15.27■□□□□ 0.03
SNX25-205ENST00000512853 MYOM1P52179 1685 aa15.27■□□□□ 0.03
SNX25-205ENST00000512853 TRPM2O94759 1503 aa15.26■□□□□ 0.03
SNX25-205ENST00000512853 ABCC1P33527 1531 aa15.26■□□□□ 0.03
SNX25-205ENST00000512853 NPM2Q86SE8 214 aaKnown RBP15.25■□□□□ 0.03
SNX25-205ENST00000512853 USP35Q9P2H5 1018 aa15.25■□□□□ 0.03
SNX25-205ENST00000512853 KDM2BQ8NHM5 1336 aa15.25■□□□□ 0.03
SNX25-205ENST00000512853 PIK3C2GO75747 1445 aa15.24■□□□□ 0.03
SNX25-205ENST00000512853 SCAPERQ9BY12 1400 aa15.24■□□□□ 0.03
SNX25-205ENST00000512853 KIAA1210Q9ULL0 1709 aa15.24■□□□□ 0.03
SNX25-205ENST00000512853 ASXL1Q8IXJ9 1541 aa15.23■□□□□ 0.03
SNX25-205ENST00000512853 PLIN1O60240 522 aa15.23■□□□□ 0.03
SNX25-205ENST00000512853 ZNF521Q96K83 1311 aa15.23■□□□□ 0.03
SNX25-205ENST00000512853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.23■□□□□ 0.03
SNX25-205ENST00000512853 PLEKHH1Q9ULM0 1364 aa15.23■□□□□ 0.03
SNX25-205ENST00000512853 SCAF11Q99590 1463 aaKnown RBP15.22■□□□□ 0.03
SNX25-205ENST00000512853 DEPDC5O75140 1603 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms