RNA–Protein interactions for RNA: ENST00000512596.5

TRIM60-204, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM60, Length 1,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-204ENST00000512596 E9PSI1 815 aa11.83□□□□□ -0.52
TRIM60-204ENST00000512596 PHLDB1Q86UU1 1377 aa11.83□□□□□ -0.52
TRIM60-204ENST00000512596 ATAD2BQ9ULI0 1458 aa11.83□□□□□ -0.52
TRIM60-204ENST00000512596 SSR1P43307 286 aaKnown RBP11.83□□□□□ -0.52
TRIM60-204ENST00000512596 MAP2K1Q02750 393 aaPredicted RBP11.83□□□□□ -0.52
TRIM60-204ENST00000512596 NBPF10Q6P3W6 841 aaKnown RBP11.83□□□□□ -0.52
TRIM60-204ENST00000512596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRIM60-204ENST00000512596 OTUD6BQ8N6M0 293 aa11.83□□□□□ -0.52
TRIM60-204ENST00000512596 CCDC66A2RUB6 948 aa11.82□□□□□ -0.52
TRIM60-204ENST00000512596 B4GALNT3Q6L9W6 998 aa11.82□□□□□ -0.52
TRIM60-204ENST00000512596 PLEKHD1A6NEE1 506 aa11.81□□□□□ -0.52
TRIM60-204ENST00000512596 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.81□□□□□ -0.52
TRIM60-204ENST00000512596 TERF2IPQ9NYB0 399 aa11.81□□□□□ -0.52
TRIM60-204ENST00000512596 HMGXB3Q12766 1538 aa11.81□□□□□ -0.52
TRIM60-204ENST00000512596 SMARCA2P51531 1590 aa11.81□□□□□ -0.52
TRIM60-204ENST00000512596 NESP48681 1621 aa11.81□□□□□ -0.52
TRIM60-204ENST00000512596 CWC22Q9HCG8 908 aaKnown RBP11.8□□□□□ -0.52
TRIM60-204ENST00000512596 MRE11P49959 708 aa11.8□□□□□ -0.52
TRIM60-204ENST00000512596 FAM13BQ9NYF5 915 aa11.8□□□□□ -0.52
TRIM60-204ENST00000512596 CEP83Q9Y592 693 aa11.8□□□□□ -0.52
TRIM60-204ENST00000512596 SEMA3FQ13275 785 aa11.79□□□□□ -0.52
TRIM60-204ENST00000512596 ZKSCAN8Q15776 578 aaPredicted RBP11.79□□□□□ -0.52
TRIM60-204ENST00000512596 NBPF6Q5VWK0 638 aa11.79□□□□□ -0.52
TRIM60-204ENST00000512596 CTR9Q6PD62 1173 aa11.79□□□□□ -0.52
TRIM60-204ENST00000512596 NBPF5PQ86XG9 351 aaPredicted RBP11.79□□□□□ -0.52
TRIM60-204ENST00000512596 NBPF4Q96M43 638 aa11.79□□□□□ -0.52
TRIM60-204ENST00000512596 MYCBPQ99417 103 aaPredicted RBP11.79□□□□□ -0.52
TRIM60-204ENST00000512596 XRCC6P12956 609 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRIM60-204ENST00000512596 ZNF526Q8TF50 670 aaPredicted RBP11.78□□□□□ -0.52
TRIM60-204ENST00000512596 ZNF692Q9BU19 519 aaPredicted RBP11.78□□□□□ -0.52
TRIM60-204ENST00000512596 CGNQ9P2M7 1197 aaKnown RBP11.78□□□□□ -0.52
TRIM60-204ENST00000512596 NINLQ9Y2I6 1382 aa11.78□□□□□ -0.52
TRIM60-204ENST00000512596 TULP2O00295 520 aa11.78□□□□□ -0.52
TRIM60-204ENST00000512596 BACH2Q9BYV9 841 aa11.78□□□□□ -0.52
TRIM60-204ENST00000512596 THOC2Q8NI27 1593 aaKnown RBP11.77□□□□□ -0.52
TRIM60-204ENST00000512596 PEG3Q9GZU2 1588 aa11.77□□□□□ -0.52
TRIM60-204ENST00000512596 IRF6O14896 467 aa11.77□□□□□ -0.53
TRIM60-204ENST00000512596 TRIM52Q96A61 297 aa11.77□□□□□ -0.53
TRIM60-204ENST00000512596 ZNF500O60304 480 aaPredicted RBP11.76□□□□□ -0.53
TRIM60-204ENST00000512596 AEBP1Q8IUX7 1158 aa11.76□□□□□ -0.53
TRIM60-204ENST00000512596 KIF3AQ9Y496 699 aa11.76□□□□□ -0.53
TRIM60-204ENST00000512596 GOLIM4O00461 696 aa11.76□□□□□ -0.53
TRIM60-204ENST00000512596 HSP90AB4PQ58FF6 505 aa11.76□□□□□ -0.53
TRIM60-204ENST00000512596 CFAP65Q6ZU64 1925 aaKnown RBP11.76□□□□□ -0.53
TRIM60-204ENST00000512596 MYH16Q9H6N6 1097 aa11.75□□□□□ -0.53
TRIM60-204ENST00000512596 BRPF1P55201 1214 aaPredicted RBP11.74□□□□□ -0.53
TRIM60-204ENST00000512596 TIGD1Q96MW7 591 aa11.74□□□□□ -0.53
TRIM60-204ENST00000512596 FRAT2O75474 233 aaPredicted RBP11.74□□□□□ -0.53
TRIM60-204ENST00000512596 CCDC172P0C7W6 258 aa11.74□□□□□ -0.53
TRIM60-204ENST00000512596 MFAP1P55081 439 aaKnown RBP11.74□□□□□ -0.53
TRIM60-204ENST00000512596 CCDC27Q2M243 656 aa11.74□□□□□ -0.53
TRIM60-204ENST00000512596 NCAPGQ9BPX3 1015 aa11.74□□□□□ -0.53
TRIM60-204ENST00000512596 LAMC3Q9Y6N6 1575 aa11.73□□□□□ -0.53
TRIM60-204ENST00000512596 NRDCO43847 1150 aa11.73□□□□□ -0.53
TRIM60-204ENST00000512596 KIF1CO43896 1103 aaKnown RBP11.73□□□□□ -0.53
TRIM60-204ENST00000512596 PDE4AP27815 886 aa11.73□□□□□ -0.53
TRIM60-204ENST00000512596 ANP32CO43423 234 aa11.72□□□□□ -0.53
TRIM60-204ENST00000512596 CALRP27797 417 aaKnown RBP11.72□□□□□ -0.53
TRIM60-204ENST00000512596 P3H3Q8IVL6 736 aa11.72□□□□□ -0.53
TRIM60-204ENST00000512596 BRMS1Q9HCU9 246 aa11.72□□□□□ -0.53
TRIM60-204ENST00000512596 BAZ1BQ9UIG0 1483 aaKnown RBP11.72□□□□□ -0.53
TRIM60-204ENST00000512596 PDS5BQ9NTI5 1447 aa11.72□□□□□ -0.53
TRIM60-204ENST00000512596 KCNJ4P48050 445 aa11.72□□□□□ -0.53
TRIM60-204ENST00000512596 SETDB1Q15047 1291 aa11.72□□□□□ -0.53
TRIM60-204ENST00000512596 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRIM60-204ENST00000512596 GABPB1Q06547 395 aaPredicted RBP11.71□□□□□ -0.53
TRIM60-204ENST00000512596 CSPP1Q1MSJ5 1256 aa11.71□□□□□ -0.53
TRIM60-204ENST00000512596 TSHZ1Q6ZSZ6 1077 aa11.71□□□□□ -0.53
TRIM60-204ENST00000512596 TMC1Q8TDI8 760 aa11.71□□□□□ -0.53
TRIM60-204ENST00000512596 SMC4Q9NTJ3 1288 aa11.71□□□□□ -0.53
TRIM60-204ENST00000512596 KIF16BQ96L93 1317 aa11.71□□□□□ -0.54
TRIM60-204ENST00000512596 DCAF8L1A6NGE4 600 aa11.7□□□□□ -0.54
TRIM60-204ENST00000512596 MKL1Q969V6 931 aa11.7□□□□□ -0.54
TRIM60-204ENST00000512596 ERBB4Q15303 1308 aa11.7□□□□□ -0.54
TRIM60-204ENST00000512596 HOXD11P31277 338 aaPredicted RBP11.7□□□□□ -0.54
TRIM60-204ENST00000512596 CREBRFQ8IUR6 639 aa11.7□□□□□ -0.54
TRIM60-204ENST00000512596 CALCOCO1Q9P1Z2 691 aa11.7□□□□□ -0.54
TRIM60-204ENST00000512596 SMARCA4P51532 1647 aa11.7□□□□□ -0.54
TRIM60-204ENST00000512596 UQCRHLA0A096LP55 91 aa11.69□□□□□ -0.54
TRIM60-204ENST00000512596 ZBTB22O15209 634 aa11.69□□□□□ -0.54
TRIM60-204ENST00000512596 UQCRHP07919 91 aa11.69□□□□□ -0.54
TRIM60-204ENST00000512596 HS1BP3Q53T59 392 aa11.69□□□□□ -0.54
TRIM60-204ENST00000512596 ZSCAN30Q86W11 494 aa11.69□□□□□ -0.54
TRIM60-204ENST00000512596 MNS1Q8NEH6 495 aa11.69□□□□□ -0.54
TRIM60-204ENST00000512596 RNF123Q5XPI4 1314 aa11.69□□□□□ -0.54
TRIM60-204ENST00000512596 RAD50Q92878 1312 aa11.69□□□□□ -0.54
TRIM60-204ENST00000512596 TRHP20396 242 aaPredicted RBP11.68□□□□□ -0.54
TRIM60-204ENST00000512596 TMTC2Q8N394 836 aa11.68□□□□□ -0.54
TRIM60-204ENST00000512596 ARID4AP29374 1257 aaPredicted RBP11.68□□□□□ -0.54
TRIM60-204ENST00000512596 POGKQ9P215 609 aa11.68□□□□□ -0.54
TRIM60-204ENST00000512596 LOC102724159A0A0B4J2E5 919 aa11.67□□□□□ -0.54
TRIM60-204ENST00000512596 PWP2Q15269 919 aaKnown RBP11.67□□□□□ -0.54
TRIM60-204ENST00000512596 FAM210AQ96ND0 272 aa11.67□□□□□ -0.54
TRIM60-204ENST00000512596 TRIM6-TRIM34B2RNG4 842 aa11.66□□□□□ -0.54
TRIM60-204ENST00000512596 CCDC96Q2M329 555 aa11.66□□□□□ -0.54
TRIM60-204ENST00000512596 TRIM34Q9BYJ4 488 aa11.66□□□□□ -0.54
TRIM60-204ENST00000512596 DONSONQ9NYP3 566 aa11.66□□□□□ -0.54
TRIM60-204ENST00000512596 ZBTB7CA1YPR0 619 aa11.66□□□□□ -0.54
TRIM60-204ENST00000512596 PPP1R15AO75807 674 aaPredicted RBP11.66□□□□□ -0.54
TRIM60-204ENST00000512596 PRR29P0C7W0 189 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms