RNA–Protein interactions for RNA: ENST00000511270.1

PROM1-212, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-212ENST00000511270 FOSBP53539 338 aa9.22□□□□□ -0.93
PROM1-212ENST00000511270 SYNJ1O43426 1573 aa9.21□□□□□ -0.93
PROM1-212ENST00000511270 GRXCR2A6NFK2 248 aa9.21□□□□□ -0.94
PROM1-212ENST00000511270 DDX12PQ92771 950 aa9.21□□□□□ -0.94
PROM1-212ENST00000511270 KHSRPQ92945 711 aaKnown RBP eCLIP9.21□□□□□ -0.94
PROM1-212ENST00000511270 FBXW7Q969H0 707 aa9.21□□□□□ -0.94
PROM1-212ENST00000511270 PCDHGA10Q9Y5H3 936 aa9.2□□□□□ -0.94
PROM1-212ENST00000511270 CFTRP13569 1480 aa9.2□□□□□ -0.94
PROM1-212ENST00000511270 TYW1BQ6NUM6 668 aa9.19□□□□□ -0.94
PROM1-212ENST00000511270 WRNQ14191 1432 aaPredicted RBP eCLIP9.19□□□□□ -0.94
PROM1-212ENST00000511270 EN1Q05925 392 aaPredicted RBP9.18□□□□□ -0.94
PROM1-212ENST00000511270 LHX6Q9UPM6 363 aa9.18□□□□□ -0.94
PROM1-212ENST00000511270 BIVM-ERCC5R4GMW8 1640 aa9.17□□□□□ -0.94
PROM1-212ENST00000511270 ST18O60284 1047 aa9.17□□□□□ -0.94
PROM1-212ENST00000511270 RBM26Q5T8P6 1007 aaKnown RBP9.17□□□□□ -0.94
PROM1-212ENST00000511270 FAM9AQ8IZU1 332 aaPredicted RBP9.17□□□□□ -0.94
PROM1-212ENST00000511270 ZNF454Q8N9F8 522 aa9.16□□□□□ -0.94
PROM1-212ENST00000511270 ZDHHC16Q969W1 377 aa9.16□□□□□ -0.94
PROM1-212ENST00000511270 TOP2BQ02880 1626 aa9.16□□□□□ -0.94
PROM1-212ENST00000511270 TPRNQ4KMQ1 711 aa9.15□□□□□ -0.94
PROM1-212ENST00000511270 GPIHBP1Q8IV16 184 aa9.15□□□□□ -0.94
PROM1-212ENST00000511270 CADPSQ9ULU8 1353 aa9.14□□□□□ -0.95
PROM1-212ENST00000511270 PPP4R3BQ5MIZ7 849 aa9.14□□□□□ -0.95
PROM1-212ENST00000511270 ZC3H15Q8WU90 426 aaKnown RBP9.14□□□□□ -0.95
PROM1-212ENST00000511270 RUSC2Q8N2Y8 1516 aa9.14□□□□□ -0.95
PROM1-212ENST00000511270 SOGA1O94964 1423 aa9.14□□□□□ -0.95
PROM1-212ENST00000511270 GPR37O15354 613 aa9.13□□□□□ -0.95
PROM1-212ENST00000511270 PRIM1P49642 420 aaKnown RBP9.13□□□□□ -0.95
PROM1-212ENST00000511270 CUX1P39880 1505 aa9.12□□□□□ -0.95
PROM1-212ENST00000511270 BCL2L12Q9HB09 334 aa9.12□□□□□ -0.95
PROM1-212ENST00000511270 MAP3K7O43318 606 aa9.1□□□□□ -0.95
PROM1-212ENST00000511270 ZMYND10O75800 440 aa9.1□□□□□ -0.95
PROM1-212ENST00000511270 LCE2DQ5TA82 110 aaPredicted RBP9.1□□□□□ -0.95
PROM1-212ENST00000511270 CERKQ8TCT0 537 aa9.1□□□□□ -0.95
PROM1-212ENST00000511270 NESP48681 1621 aa9.09□□□□□ -0.95
PROM1-212ENST00000511270 FCHSD2O94868 740 aa9.09□□□□□ -0.95
PROM1-212ENST00000511270 EMP3P54852 163 aa9.09□□□□□ -0.95
PROM1-212ENST00000511270 PTGDRQ13258 359 aa9.09□□□□□ -0.95
PROM1-212ENST00000511270 C6orf132Q5T0Z8 1188 aa9.09□□□□□ -0.95
PROM1-212ENST00000511270 FAM163AQ96GL9 167 aaPredicted RBP9.09□□□□□ -0.95
PROM1-212ENST00000511270 ADAM33Q9BZ11 813 aa9.09□□□□□ -0.95
PROM1-212ENST00000511270 NUTM2FA1L443 756 aa9.08□□□□□ -0.96
PROM1-212ENST00000511270 HIC1Q14526 733 aa9.08□□□□□ -0.96
PROM1-212ENST00000511270 ERBB3P21860 1342 aa9.07□□□□□ -0.96
PROM1-212ENST00000511270 EEA1Q15075 1411 aa9.07□□□□□ -0.96
PROM1-212ENST00000511270 RBM33Q96EV2 1170 aaKnown RBP9.07□□□□□ -0.96
PROM1-212ENST00000511270 NPDC1Q9NQX5 325 aaPredicted RBP9.07□□□□□ -0.96
PROM1-212ENST00000511270 RBM27Q9P2N5 1060 aaKnown RBP9.07□□□□□ -0.96
PROM1-212ENST00000511270 LAMC3Q9Y6N6 1575 aa9.07□□□□□ -0.96
PROM1-212ENST00000511270 TSR1Q2NL82 804 aaKnown RBP9.06□□□□□ -0.96
PROM1-212ENST00000511270 VARS2Q5ST30 1063 aaKnown RBP9.06□□□□□ -0.96
PROM1-212ENST00000511270 BARGINQ6ZT62 677 aa9.06□□□□□ -0.96
PROM1-212ENST00000511270 FANCD2Q9BXW9 1451 aa9.05□□□□□ -0.96
PROM1-212ENST00000511270 GNPATO15228 680 aa9.05□□□□□ -0.96
PROM1-212ENST00000511270 PTPREP23469 700 aa9.05□□□□□ -0.96
PROM1-212ENST00000511270 PBX2P40425 430 aa9.05□□□□□ -0.96
PROM1-212ENST00000511270 MARVELD3Q96A59 401 aa9.05□□□□□ -0.96
PROM1-212ENST00000511270 CDHR5Q9HBB8 845 aa9.05□□□□□ -0.96
PROM1-212ENST00000511270 PPP1R3GB7ZBB8 358 aa9.04□□□□□ -0.96
PROM1-212ENST00000511270 ZNF687Q8N1G0 1237 aa9.03□□□□□ -0.96
PROM1-212ENST00000511270 KIF21AQ7Z4S6 1674 aa9.03□□□□□ -0.96
PROM1-212ENST00000511270 FAM205CA6NFA0 338 aa9.02□□□□□ -0.97
PROM1-212ENST00000511270 MAP2K5Q13163 448 aa9.02□□□□□ -0.97
PROM1-212ENST00000511270 KCNH8Q96L42 1107 aa9.02□□□□□ -0.97
PROM1-212ENST00000511270 KIF21BO75037 1637 aa9.02□□□□□ -0.97
PROM1-212ENST00000511270 HS3ST6Q96QI5 342 aa9.01□□□□□ -0.97
PROM1-212ENST00000511270 DNMBPQ6XZF7 1577 aa9□□□□□ -0.97
PROM1-212ENST00000511270 ARHGAP33O14559 1287 aa9□□□□□ -0.97
PROM1-212ENST00000511270 TTC13Q8NBP0 860 aa9□□□□□ -0.97
PROM1-212ENST00000511270 MINK1Q8N4C8 1332 aaPredicted RBP9□□□□□ -0.97
PROM1-212ENST00000511270 FGD5Q6ZNL6 1462 aa8.98□□□□□ -0.97
PROM1-212ENST00000511270 ONECUT3O60422 494 aaPredicted RBP8.98□□□□□ -0.97
PROM1-212ENST00000511270 COL9A1P20849 921 aa8.98□□□□□ -0.97
PROM1-212ENST00000511270 PRSS12P56730 875 aa8.98□□□□□ -0.97
PROM1-212ENST00000511270 KCNK17Q96T54 332 aa8.98□□□□□ -0.97
PROM1-212ENST00000511270 SLC4A5Q9BY07 1137 aa8.98□□□□□ -0.97
PROM1-212ENST00000511270 TOPBP1Q92547 1522 aa8.98□□□□□ -0.97
PROM1-212ENST00000511270 GOLGA3Q08378 1498 aa8.97□□□□□ -0.97
PROM1-212ENST00000511270 CEP164Q9UPV0 1460 aa8.97□□□□□ -0.97
PROM1-212ENST00000511270 POTEB3A0JP26 581 aa8.97□□□□□ -0.97
PROM1-212ENST00000511270 POTEBQ6S5H4 581 aa8.97□□□□□ -0.97
PROM1-212ENST00000511270 POTEEQ6S8J3 1075 aa8.97□□□□□ -0.97
PROM1-212ENST00000511270 TNIKQ9UKE5 1360 aa8.97□□□□□ -0.97
PROM1-212ENST00000511270 URB2Q14146 1524 aaKnown RBP8.96□□□□□ -0.97
PROM1-212ENST00000511270 IRF6O14896 467 aa8.96□□□□□ -0.98
PROM1-212ENST00000511270 CDCA7LQ96GN5 454 aa8.96□□□□□ -0.98
PROM1-212ENST00000511270 AK7Q96M32 723 aa8.96□□□□□ -0.98
PROM1-212ENST00000511270 FECHP22830 423 aa8.95□□□□□ -0.98
PROM1-212ENST00000511270 KRI1Q8N9T8 703 aaKnown RBP8.95□□□□□ -0.98
PROM1-212ENST00000511270 ZBED2Q9BTP6 218 aa8.95□□□□□ -0.98
PROM1-212ENST00000511270 SLC24A3Q9HC58 644 aa8.95□□□□□ -0.98
PROM1-212ENST00000511270 PDS5BQ9NTI5 1447 aa8.95□□□□□ -0.98
PROM1-212ENST00000511270 WDR97A6NE52 1622 aa8.94□□□□□ -0.98
PROM1-212ENST00000511270 PADI6Q6TGC4 694 aa8.94□□□□□ -0.98
PROM1-212ENST00000511270 KIF27Q86VH2 1401 aa8.94□□□□□ -0.98
PROM1-212ENST00000511270 RAPGEF2Q9Y4G8 1499 aa8.94□□□□□ -0.98
PROM1-212ENST00000511270 TRIM6-TRIM34B2RNG4 842 aa8.93□□□□□ -0.98
PROM1-212ENST00000511270 PSEN2P49810 448 aa8.93□□□□□ -0.98
PROM1-212ENST00000511270 CCDC102AQ96A19 550 aa8.93□□□□□ -0.98
PROM1-212ENST00000511270 POLA1P09884 1462 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms